Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00816

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00814 and MPMX20_00815 are separated by 0 nucleotidesMPMX20_00815 and MPMX20_00816 are separated by 116 nucleotidesMPMX20_00816 and MPMX20_00817 are separated by 67 nucleotides MPMX20_00814: MPMX20_00814 - S-adenosylmethionine decarboxylase proenzyme, at 856,523 to 857,317 _00814 MPMX20_00815: MPMX20_00815 - Polyamine aminopropyltransferase, at 857,318 to 858,187 _00815 MPMX20_00816: MPMX20_00816 - hypothetical protein, at 858,304 to 858,690 _00816 MPMX20_00817: MPMX20_00817 - Blue copper oxidase CueO, at 858,758 to 860,356 _00817 Position (kb) 858 859Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 857.310 kb on - strandat 857.329 kb on + strandat 857.366 kb on + strandat 857.374 kb on - strandat 857.374 kb on - strandat 857.378 kb on + strandat 857.417 kb on + strand, within MPMX20_00815at 857.440 kb on - strand, within MPMX20_00815at 857.468 kb on + strand, within MPMX20_00815at 857.500 kb on - strand, within MPMX20_00815at 857.500 kb on - strand, within MPMX20_00815at 857.591 kb on - strand, within MPMX20_00815at 857.638 kb on + strand, within MPMX20_00815at 857.646 kb on - strand, within MPMX20_00815at 857.646 kb on - strand, within MPMX20_00815at 857.646 kb on - strand, within MPMX20_00815at 857.704 kb on + strand, within MPMX20_00815at 857.735 kb on + strand, within MPMX20_00815at 857.735 kb on + strand, within MPMX20_00815at 857.735 kb on + strand, within MPMX20_00815at 857.743 kb on - strand, within MPMX20_00815at 857.743 kb on - strand, within MPMX20_00815at 857.765 kb on - strand, within MPMX20_00815at 857.811 kb on + strand, within MPMX20_00815at 857.811 kb on + strand, within MPMX20_00815at 857.819 kb on - strand, within MPMX20_00815at 857.828 kb on + strand, within MPMX20_00815at 857.828 kb on + strand, within MPMX20_00815at 857.914 kb on + strand, within MPMX20_00815at 857.922 kb on - strand, within MPMX20_00815at 857.922 kb on - strand, within MPMX20_00815at 857.948 kb on + strand, within MPMX20_00815at 857.974 kb on + strand, within MPMX20_00815at 858.119 kb on - strandat 858.142 kb on - strandat 858.142 kb on - strandat 858.142 kb on - strandat 858.197 kb on + strandat 858.259 kb on - strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.272 kb on + strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.280 kb on - strandat 858.282 kb on + strandat 858.284 kb on + strandat 858.284 kb on + strandat 858.284 kb on + strandat 858.340 kb on + strandat 858.543 kb on - strand, within MPMX20_00816at 858.545 kb on + strand, within MPMX20_00816at 858.564 kb on - strand, within MPMX20_00816at 858.565 kb on - strand, within MPMX20_00816at 858.585 kb on + strand, within MPMX20_00816at 858.585 kb on + strand, within MPMX20_00816at 858.585 kb on + strand, within MPMX20_00816at 858.593 kb on - strand, within MPMX20_00816at 858.595 kb on - strand, within MPMX20_00816at 858.661 kb on - strandat 858.700 kb on - strandat 858.700 kb on - strandat 858.857 kb on + strandat 858.865 kb on - strandat 858.918 kb on + strand, within MPMX20_00817at 858.927 kb on + strand, within MPMX20_00817at 858.928 kb on - strand, within MPMX20_00817at 859.020 kb on + strand, within MPMX20_00817at 859.028 kb on - strand, within MPMX20_00817at 859.033 kb on - strand, within MPMX20_00817at 859.045 kb on - strand, within MPMX20_00817at 859.077 kb on + strand, within MPMX20_00817at 859.101 kb on + strand, within MPMX20_00817at 859.101 kb on + strand, within MPMX20_00817at 859.106 kb on + strand, within MPMX20_00817at 859.115 kb on + strand, within MPMX20_00817at 859.115 kb on - strand, within MPMX20_00817at 859.157 kb on - strand, within MPMX20_00817at 859.187 kb on - strand, within MPMX20_00817at 859.193 kb on - strand, within MPMX20_00817at 859.218 kb on + strand, within MPMX20_00817at 859.229 kb on - strand, within MPMX20_00817at 859.319 kb on - strand, within MPMX20_00817at 859.401 kb on - strand, within MPMX20_00817at 859.436 kb on + strand, within MPMX20_00817at 859.436 kb on - strand, within MPMX20_00817at 859.483 kb on - strand, within MPMX20_00817at 859.491 kb on + strand, within MPMX20_00817at 859.499 kb on - strand, within MPMX20_00817at 859.499 kb on - strand, within MPMX20_00817at 859.504 kb on - strand, within MPMX20_00817at 859.509 kb on - strand, within MPMX20_00817at 859.611 kb on - strand, within MPMX20_00817at 859.635 kb on + strand, within MPMX20_00817at 859.643 kb on - strand, within MPMX20_00817at 859.670 kb on + strand, within MPMX20_00817at 859.681 kb on + strand, within MPMX20_00817

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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857,310 - -0.9
857,329 + -0.6
857,366 + -1.2
857,374 - +0.8
857,374 - +1.2
857,378 + -3.4
857,417 + MPMX20_00815 0.11 +0.5
857,440 - MPMX20_00815 0.14 +0.5
857,468 + MPMX20_00815 0.17 -1.2
857,500 - MPMX20_00815 0.21 -0.5
857,500 - MPMX20_00815 0.21 +0.8
857,591 - MPMX20_00815 0.31 -3.0
857,638 + MPMX20_00815 0.37 -1.2
857,646 - MPMX20_00815 0.38 -0.3
857,646 - MPMX20_00815 0.38 +0.3
857,646 - MPMX20_00815 0.38 -3.4
857,704 + MPMX20_00815 0.44 +0.3
857,735 + MPMX20_00815 0.48 +0.6
857,735 + MPMX20_00815 0.48 +1.6
857,735 + MPMX20_00815 0.48 +0.7
857,743 - MPMX20_00815 0.49 +0.4
857,743 - MPMX20_00815 0.49 -3.2
857,765 - MPMX20_00815 0.51 +0.3
857,811 + MPMX20_00815 0.57 -3.4
857,811 + MPMX20_00815 0.57 +2.0
857,819 - MPMX20_00815 0.58 +2.6
857,828 + MPMX20_00815 0.59 +0.8
857,828 + MPMX20_00815 0.59 -0.2
857,914 + MPMX20_00815 0.69 -1.6
857,922 - MPMX20_00815 0.69 +0.8
857,922 - MPMX20_00815 0.69 -1.4
857,948 + MPMX20_00815 0.72 -1.6
857,974 + MPMX20_00815 0.75 -1.1
858,119 - +2.5
858,142 - +1.0
858,142 - +2.9
858,142 - -0.2
858,197 + -2.3
858,259 - -1.1
858,272 + -1.6
858,272 + -1.2
858,272 + -3.2
858,272 + -1.1
858,272 + +1.0
858,272 + -0.2
858,272 + +0.4
858,272 + +2.7
858,272 + +1.6
858,280 - +1.6
858,280 - -1.2
858,280 - -1.6
858,280 - -3.1
858,280 - -1.9
858,280 - -2.6
858,280 - -2.1
858,282 + -2.3
858,284 + +2.2
858,284 + -1.5
858,284 + +1.7
858,340 + -3.1
858,543 - MPMX20_00816 0.62 -2.4
858,545 + MPMX20_00816 0.62 +0.3
858,564 - MPMX20_00816 0.67 +0.3
858,565 - MPMX20_00816 0.67 +0.5
858,585 + MPMX20_00816 0.73 +0.8
858,585 + MPMX20_00816 0.73 +3.5
858,585 + MPMX20_00816 0.73 -2.9
858,593 - MPMX20_00816 0.75 -0.7
858,595 - MPMX20_00816 0.75 +2.6
858,661 - +0.9
858,700 - -2.4
858,700 - +0.9
858,857 + +1.3
858,865 - +1.7
858,918 + MPMX20_00817 0.10 -1.0
858,927 + MPMX20_00817 0.11 -1.7
858,928 - MPMX20_00817 0.11 -1.2
859,020 + MPMX20_00817 0.16 -3.1
859,028 - MPMX20_00817 0.17 -0.2
859,033 - MPMX20_00817 0.17 -1.7
859,045 - MPMX20_00817 0.18 +0.8
859,077 + MPMX20_00817 0.20 -2.2
859,101 + MPMX20_00817 0.21 +3.1
859,101 + MPMX20_00817 0.21 +1.2
859,106 + MPMX20_00817 0.22 -1.0
859,115 + MPMX20_00817 0.22 -3.2
859,115 - MPMX20_00817 0.22 +1.4
859,157 - MPMX20_00817 0.25 +0.6
859,187 - MPMX20_00817 0.27 -1.2
859,193 - MPMX20_00817 0.27 -2.3
859,218 + MPMX20_00817 0.29 -1.6
859,229 - MPMX20_00817 0.29 -2.4
859,319 - MPMX20_00817 0.35 -3.5
859,401 - MPMX20_00817 0.40 +1.3
859,436 + MPMX20_00817 0.42 -3.2
859,436 - MPMX20_00817 0.42 -3.0
859,483 - MPMX20_00817 0.45 +0.1
859,491 + MPMX20_00817 0.46 +0.3
859,499 - MPMX20_00817 0.46 -1.5
859,499 - MPMX20_00817 0.46 -1.0
859,504 - MPMX20_00817 0.47 +0.0
859,509 - MPMX20_00817 0.47 +2.9
859,611 - MPMX20_00817 0.53 -3.5
859,635 + MPMX20_00817 0.55 -0.5
859,643 - MPMX20_00817 0.55 -2.2
859,670 + MPMX20_00817 0.57 -0.3
859,681 + MPMX20_00817 0.58 -0.7

Or see this region's nucleotide sequence