Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00757

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00756 and MPMX20_00757 are separated by 10 nucleotidesMPMX20_00757 and MPMX20_00758 are separated by 336 nucleotides MPMX20_00756: MPMX20_00756 - L-arabinose isomerase, at 785,737 to 787,239 _00756 MPMX20_00757: MPMX20_00757 - Ribulokinase, at 787,250 to 788,959 _00757 MPMX20_00758: MPMX20_00758 - Arabinose operon regulatory protein, at 789,296 to 790,141 _00758 Position (kb) 787 788 789Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 786.381 kb on + strand, within MPMX20_00756at 786.407 kb on - strand, within MPMX20_00756at 786.407 kb on - strand, within MPMX20_00756at 786.435 kb on + strand, within MPMX20_00756at 786.435 kb on + strand, within MPMX20_00756at 786.435 kb on + strand, within MPMX20_00756at 786.443 kb on - strand, within MPMX20_00756at 786.443 kb on - strand, within MPMX20_00756at 786.492 kb on - strand, within MPMX20_00756at 786.545 kb on + strand, within MPMX20_00756at 786.594 kb on + strand, within MPMX20_00756at 786.594 kb on + strand, within MPMX20_00756at 786.595 kb on + strand, within MPMX20_00756at 786.602 kb on - strand, within MPMX20_00756at 786.609 kb on + strand, within MPMX20_00756at 786.635 kb on + strand, within MPMX20_00756at 786.715 kb on - strand, within MPMX20_00756at 786.715 kb on - strand, within MPMX20_00756at 786.750 kb on + strand, within MPMX20_00756at 786.800 kb on - strand, within MPMX20_00756at 786.863 kb on + strand, within MPMX20_00756at 786.898 kb on + strand, within MPMX20_00756at 786.901 kb on - strand, within MPMX20_00756at 786.922 kb on - strand, within MPMX20_00756at 786.924 kb on + strand, within MPMX20_00756at 786.932 kb on - strand, within MPMX20_00756at 786.932 kb on - strand, within MPMX20_00756at 786.953 kb on + strand, within MPMX20_00756at 786.961 kb on - strand, within MPMX20_00756at 786.987 kb on + strand, within MPMX20_00756at 786.987 kb on + strand, within MPMX20_00756at 786.987 kb on + strand, within MPMX20_00756at 786.994 kb on + strand, within MPMX20_00756at 786.995 kb on - strand, within MPMX20_00756at 786.995 kb on - strand, within MPMX20_00756at 787.000 kb on - strand, within MPMX20_00756at 787.109 kb on + strandat 787.181 kb on - strandat 787.181 kb on - strandat 787.183 kb on + strandat 787.183 kb on + strandat 787.183 kb on + strandat 787.186 kb on - strandat 787.196 kb on - strandat 787.196 kb on - strandat 787.223 kb on - strandat 787.255 kb on + strandat 787.261 kb on + strandat 787.263 kb on - strandat 787.269 kb on - strandat 787.283 kb on + strandat 787.291 kb on - strandat 787.351 kb on + strandat 787.418 kb on - strandat 787.429 kb on - strand, within MPMX20_00757at 787.442 kb on - strand, within MPMX20_00757at 787.491 kb on + strand, within MPMX20_00757at 787.491 kb on + strand, within MPMX20_00757at 787.491 kb on + strand, within MPMX20_00757at 787.504 kb on - strand, within MPMX20_00757at 787.529 kb on + strand, within MPMX20_00757at 787.537 kb on + strand, within MPMX20_00757at 787.537 kb on - strand, within MPMX20_00757at 787.537 kb on - strand, within MPMX20_00757at 787.537 kb on - strand, within MPMX20_00757at 787.608 kb on + strand, within MPMX20_00757at 787.616 kb on - strand, within MPMX20_00757at 787.639 kb on - strand, within MPMX20_00757at 787.641 kb on - strand, within MPMX20_00757at 787.656 kb on - strand, within MPMX20_00757at 787.735 kb on - strand, within MPMX20_00757at 787.780 kb on - strand, within MPMX20_00757at 787.782 kb on + strand, within MPMX20_00757at 787.821 kb on + strand, within MPMX20_00757at 787.821 kb on + strand, within MPMX20_00757at 787.829 kb on - strand, within MPMX20_00757at 787.881 kb on - strand, within MPMX20_00757at 787.881 kb on - strand, within MPMX20_00757at 787.886 kb on - strand, within MPMX20_00757at 787.939 kb on - strand, within MPMX20_00757at 787.963 kb on + strand, within MPMX20_00757at 787.989 kb on - strand, within MPMX20_00757at 787.997 kb on - strand, within MPMX20_00757at 788.042 kb on + strand, within MPMX20_00757at 788.042 kb on + strand, within MPMX20_00757at 788.042 kb on + strand, within MPMX20_00757at 788.050 kb on - strand, within MPMX20_00757at 788.050 kb on - strand, within MPMX20_00757at 788.069 kb on + strand, within MPMX20_00757at 788.093 kb on - strand, within MPMX20_00757at 788.097 kb on - strand, within MPMX20_00757at 788.388 kb on + strand, within MPMX20_00757at 788.404 kb on - strand, within MPMX20_00757at 788.451 kb on + strand, within MPMX20_00757at 788.466 kb on - strand, within MPMX20_00757at 788.495 kb on - strand, within MPMX20_00757at 788.504 kb on + strand, within MPMX20_00757at 788.564 kb on + strand, within MPMX20_00757at 788.579 kb on - strand, within MPMX20_00757at 788.581 kb on + strand, within MPMX20_00757at 788.589 kb on - strand, within MPMX20_00757at 788.606 kb on - strand, within MPMX20_00757at 788.627 kb on - strand, within MPMX20_00757at 788.686 kb on + strand, within MPMX20_00757at 788.785 kb on + strand, within MPMX20_00757at 788.790 kb on - strandat 788.837 kb on - strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.850 kb on - strandat 788.850 kb on - strandat 788.871 kb on - strandat 788.871 kb on - strandat 788.871 kb on - strandat 788.895 kb on + strandat 789.002 kb on - strandat 789.069 kb on + strandat 789.188 kb on + strandat 789.196 kb on - strandat 789.230 kb on + strandat 789.230 kb on + strandat 789.336 kb on + strandat 789.359 kb on + strandat 789.359 kb on + strandat 789.360 kb on + strandat 789.375 kb on + strandat 789.426 kb on + strand, within MPMX20_00758at 789.426 kb on + strand, within MPMX20_00758at 789.434 kb on - strand, within MPMX20_00758at 789.434 kb on - strand, within MPMX20_00758at 789.439 kb on - strand, within MPMX20_00758at 789.446 kb on - strand, within MPMX20_00758at 789.575 kb on - strand, within MPMX20_00758at 789.585 kb on + strand, within MPMX20_00758at 789.585 kb on + strand, within MPMX20_00758at 789.618 kb on - strand, within MPMX20_00758at 789.666 kb on + strand, within MPMX20_00758at 789.724 kb on - strand, within MPMX20_00758at 789.758 kb on - strand, within MPMX20_00758at 789.758 kb on - strand, within MPMX20_00758at 789.758 kb on - strand, within MPMX20_00758at 789.773 kb on + strand, within MPMX20_00758at 789.778 kb on - strand, within MPMX20_00758at 789.837 kb on + strand, within MPMX20_00758at 789.847 kb on + strand, within MPMX20_00758at 789.847 kb on + strand, within MPMX20_00758at 789.925 kb on - strand, within MPMX20_00758at 789.940 kb on - strand, within MPMX20_00758

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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786,381 + MPMX20_00756 0.43 +0.0
786,407 - MPMX20_00756 0.45 +1.6
786,407 - MPMX20_00756 0.45 +1.3
786,435 + MPMX20_00756 0.46 -0.1
786,435 + MPMX20_00756 0.46 +1.2
786,435 + MPMX20_00756 0.46 -0.4
786,443 - MPMX20_00756 0.47 +1.9
786,443 - MPMX20_00756 0.47 -0.5
786,492 - MPMX20_00756 0.50 +0.8
786,545 + MPMX20_00756 0.54 -2.3
786,594 + MPMX20_00756 0.57 +0.2
786,594 + MPMX20_00756 0.57 +2.5
786,595 + MPMX20_00756 0.57 -2.6
786,602 - MPMX20_00756 0.58 -3.7
786,609 + MPMX20_00756 0.58 -3.7
786,635 + MPMX20_00756 0.60 +2.5
786,715 - MPMX20_00756 0.65 -1.7
786,715 - MPMX20_00756 0.65 +0.6
786,750 + MPMX20_00756 0.67 +1.2
786,800 - MPMX20_00756 0.71 +1.2
786,863 + MPMX20_00756 0.75 -1.1
786,898 + MPMX20_00756 0.77 +0.5
786,901 - MPMX20_00756 0.77 -0.0
786,922 - MPMX20_00756 0.79 +1.2
786,924 + MPMX20_00756 0.79 +1.3
786,932 - MPMX20_00756 0.80 +1.8
786,932 - MPMX20_00756 0.80 -2.1
786,953 + MPMX20_00756 0.81 -2.8
786,961 - MPMX20_00756 0.81 -0.1
786,987 + MPMX20_00756 0.83 -1.4
786,987 + MPMX20_00756 0.83 -3.0
786,987 + MPMX20_00756 0.83 +1.0
786,994 + MPMX20_00756 0.84 -3.0
786,995 - MPMX20_00756 0.84 -3.5
786,995 - MPMX20_00756 0.84 +1.2
787,000 - MPMX20_00756 0.84 +0.1
787,109 + -3.6
787,181 - +4.3
787,181 - -1.6
787,183 + +0.3
787,183 + +3.3
787,183 + -1.8
787,186 - +2.2
787,196 - +2.0
787,196 - +0.4
787,223 - +1.8
787,255 + -2.0
787,261 + -0.9
787,263 - +1.1
787,269 - -1.7
787,283 + -1.4
787,291 - -2.2
787,351 + +1.9
787,418 - -1.9
787,429 - MPMX20_00757 0.10 -0.8
787,442 - MPMX20_00757 0.11 +0.6
787,491 + MPMX20_00757 0.14 +2.3
787,491 + MPMX20_00757 0.14 -0.6
787,491 + MPMX20_00757 0.14 -2.6
787,504 - MPMX20_00757 0.15 -1.9
787,529 + MPMX20_00757 0.16 -0.1
787,537 + MPMX20_00757 0.17 +3.2
787,537 - MPMX20_00757 0.17 +1.8
787,537 - MPMX20_00757 0.17 +2.6
787,537 - MPMX20_00757 0.17 -0.1
787,608 + MPMX20_00757 0.21 -3.8
787,616 - MPMX20_00757 0.21 +1.5
787,639 - MPMX20_00757 0.23 -1.8
787,641 - MPMX20_00757 0.23 +0.6
787,656 - MPMX20_00757 0.24 +0.8
787,735 - MPMX20_00757 0.28 +4.5
787,780 - MPMX20_00757 0.31 +0.1
787,782 + MPMX20_00757 0.31 -1.5
787,821 + MPMX20_00757 0.33 -2.3
787,821 + MPMX20_00757 0.33 -3.0
787,829 - MPMX20_00757 0.34 +1.4
787,881 - MPMX20_00757 0.37 +0.5
787,881 - MPMX20_00757 0.37 +2.1
787,886 - MPMX20_00757 0.37 -0.3
787,939 - MPMX20_00757 0.40 +2.6
787,963 + MPMX20_00757 0.42 +1.7
787,989 - MPMX20_00757 0.43 +1.3
787,997 - MPMX20_00757 0.44 -0.2
788,042 + MPMX20_00757 0.46 +0.9
788,042 + MPMX20_00757 0.46 +1.5
788,042 + MPMX20_00757 0.46 +0.6
788,050 - MPMX20_00757 0.47 +1.2
788,050 - MPMX20_00757 0.47 -2.4
788,069 + MPMX20_00757 0.48 -3.6
788,093 - MPMX20_00757 0.49 +3.0
788,097 - MPMX20_00757 0.50 +1.9
788,388 + MPMX20_00757 0.67 +1.3
788,404 - MPMX20_00757 0.67 +0.3
788,451 + MPMX20_00757 0.70 +3.2
788,466 - MPMX20_00757 0.71 +2.0
788,495 - MPMX20_00757 0.73 +2.3
788,504 + MPMX20_00757 0.73 +2.6
788,564 + MPMX20_00757 0.77 -1.7
788,579 - MPMX20_00757 0.78 +3.2
788,581 + MPMX20_00757 0.78 -2.1
788,589 - MPMX20_00757 0.78 -1.9
788,606 - MPMX20_00757 0.79 +0.1
788,627 - MPMX20_00757 0.81 +1.1
788,686 + MPMX20_00757 0.84 -0.9
788,785 + MPMX20_00757 0.90 +2.5
788,790 - +0.6
788,837 - +2.2
788,842 + -1.5
788,842 + +0.0
788,842 + -2.1
788,842 + +1.8
788,842 + +2.3
788,850 - -3.2
788,850 - +0.1
788,871 - -1.7
788,871 - +1.0
788,871 - -1.3
788,895 + -2.5
789,002 - -1.3
789,069 + +0.9
789,188 + +1.5
789,196 - +0.3
789,230 + -0.7
789,230 + +0.0
789,336 + -4.0
789,359 + -0.2
789,359 + +0.5
789,360 + -1.2
789,375 + -0.2
789,426 + MPMX20_00758 0.15 -0.3
789,426 + MPMX20_00758 0.15 +0.8
789,434 - MPMX20_00758 0.16 +1.4
789,434 - MPMX20_00758 0.16 -1.3
789,439 - MPMX20_00758 0.17 -2.0
789,446 - MPMX20_00758 0.18 +2.6
789,575 - MPMX20_00758 0.33 -1.0
789,585 + MPMX20_00758 0.34 -1.0
789,585 + MPMX20_00758 0.34 +1.7
789,618 - MPMX20_00758 0.38 +3.1
789,666 + MPMX20_00758 0.44 +1.7
789,724 - MPMX20_00758 0.51 +0.9
789,758 - MPMX20_00758 0.55 +1.3
789,758 - MPMX20_00758 0.55 +1.3
789,758 - MPMX20_00758 0.55 -1.5
789,773 + MPMX20_00758 0.56 +1.8
789,778 - MPMX20_00758 0.57 -2.3
789,837 + MPMX20_00758 0.64 +1.9
789,847 + MPMX20_00758 0.65 +1.3
789,847 + MPMX20_00758 0.65 -2.5
789,925 - MPMX20_00758 0.74 -0.3
789,940 - MPMX20_00758 0.76 -1.4

Or see this region's nucleotide sequence