Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00695

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00694 and MPMX20_00695 are separated by 35 nucleotidesMPMX20_00695 and MPMX20_00696 are separated by 58 nucleotides MPMX20_00694: MPMX20_00694 - DNA repair protein RadA, at 713,403 to 714,788 _00694 MPMX20_00695: MPMX20_00695 - Trifunctional NAD biosynthesis/regulator protein NadR, at 714,824 to 716,056 _00695 MPMX20_00696: MPMX20_00696 - Zinc-type alcohol dehydrogenase-like protein, at 716,115 to 717,116 _00696 Position (kb) 714 715 716 717Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 713.841 kb on - strand, within MPMX20_00694at 713.841 kb on - strand, within MPMX20_00694at 713.920 kb on + strand, within MPMX20_00694at 713.928 kb on - strand, within MPMX20_00694at 713.946 kb on - strand, within MPMX20_00694at 713.954 kb on - strand, within MPMX20_00694at 713.959 kb on + strand, within MPMX20_00694at 714.091 kb on + strand, within MPMX20_00694at 714.107 kb on - strand, within MPMX20_00694at 714.226 kb on + strand, within MPMX20_00694at 714.499 kb on + strand, within MPMX20_00694at 714.510 kb on + strand, within MPMX20_00694at 714.515 kb on + strand, within MPMX20_00694at 714.515 kb on + strand, within MPMX20_00694at 714.518 kb on - strand, within MPMX20_00694at 714.523 kb on - strand, within MPMX20_00694at 714.550 kb on + strand, within MPMX20_00694at 714.556 kb on - strand, within MPMX20_00694at 714.558 kb on - strand, within MPMX20_00694at 714.558 kb on - strand, within MPMX20_00694at 714.606 kb on + strand, within MPMX20_00694at 714.614 kb on - strand, within MPMX20_00694at 714.638 kb on - strand, within MPMX20_00694at 714.697 kb on + strandat 714.697 kb on + strandat 714.727 kb on + strandat 714.734 kb on + strandat 714.763 kb on + strandat 714.771 kb on - strandat 714.849 kb on - strandat 714.971 kb on + strand, within MPMX20_00695at 714.971 kb on + strand, within MPMX20_00695at 715.063 kb on + strand, within MPMX20_00695at 715.066 kb on - strand, within MPMX20_00695at 715.071 kb on - strand, within MPMX20_00695at 715.091 kb on - strand, within MPMX20_00695at 715.091 kb on - strand, within MPMX20_00695at 715.091 kb on - strand, within MPMX20_00695at 715.105 kb on + strand, within MPMX20_00695at 715.145 kb on - strand, within MPMX20_00695at 715.145 kb on - strand, within MPMX20_00695at 715.220 kb on - strand, within MPMX20_00695at 715.260 kb on + strand, within MPMX20_00695at 715.260 kb on + strand, within MPMX20_00695at 715.275 kb on - strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.281 kb on + strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.289 kb on - strand, within MPMX20_00695at 715.294 kb on + strand, within MPMX20_00695at 715.346 kb on + strand, within MPMX20_00695at 715.353 kb on + strand, within MPMX20_00695at 715.353 kb on + strand, within MPMX20_00695at 715.353 kb on - strand, within MPMX20_00695at 715.354 kb on - strand, within MPMX20_00695at 715.361 kb on - strand, within MPMX20_00695at 715.361 kb on - strand, within MPMX20_00695at 715.371 kb on - strand, within MPMX20_00695at 715.436 kb on - strand, within MPMX20_00695at 715.476 kb on + strand, within MPMX20_00695at 715.524 kb on + strand, within MPMX20_00695at 715.607 kb on + strand, within MPMX20_00695at 715.609 kb on + strand, within MPMX20_00695at 715.626 kb on - strand, within MPMX20_00695at 715.629 kb on + strand, within MPMX20_00695at 715.634 kb on + strand, within MPMX20_00695at 715.637 kb on - strand, within MPMX20_00695at 715.642 kb on - strand, within MPMX20_00695at 715.660 kb on + strand, within MPMX20_00695at 715.692 kb on + strand, within MPMX20_00695at 715.692 kb on + strand, within MPMX20_00695at 715.766 kb on + strand, within MPMX20_00695at 715.774 kb on - strand, within MPMX20_00695at 715.932 kb on - strand, within MPMX20_00695at 715.991 kb on + strandat 715.999 kb on - strandat 716.009 kb on - strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.016 kb on + strandat 716.024 kb on - strandat 716.024 kb on - strandat 716.024 kb on - strandat 716.024 kb on - strandat 716.065 kb on + strandat 716.065 kb on + strandat 716.073 kb on - strandat 716.073 kb on - strandat 716.073 kb on - strandat 716.073 kb on - strandat 716.113 kb on + strandat 716.113 kb on + strandat 716.297 kb on + strand, within MPMX20_00696at 716.313 kb on - strand, within MPMX20_00696at 716.405 kb on - strand, within MPMX20_00696at 716.506 kb on + strand, within MPMX20_00696at 716.559 kb on - strand, within MPMX20_00696at 716.566 kb on + strand, within MPMX20_00696at 716.574 kb on - strand, within MPMX20_00696at 716.593 kb on + strand, within MPMX20_00696at 716.636 kb on + strand, within MPMX20_00696at 716.644 kb on - strand, within MPMX20_00696at 716.773 kb on - strand, within MPMX20_00696at 716.818 kb on + strand, within MPMX20_00696at 716.818 kb on - strand, within MPMX20_00696at 716.881 kb on - strand, within MPMX20_00696at 716.888 kb on + strand, within MPMX20_00696at 716.896 kb on - strand, within MPMX20_00696at 717.015 kb on - strand, within MPMX20_00696

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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713,841 - MPMX20_00694 0.32 +0.7
713,841 - MPMX20_00694 0.32 +2.1
713,920 + MPMX20_00694 0.37 +0.7
713,928 - MPMX20_00694 0.38 -0.5
713,946 - MPMX20_00694 0.39 +1.3
713,954 - MPMX20_00694 0.40 -0.1
713,959 + MPMX20_00694 0.40 +1.6
714,091 + MPMX20_00694 0.50 -3.0
714,107 - MPMX20_00694 0.51 -0.1
714,226 + MPMX20_00694 0.59 +2.8
714,499 + MPMX20_00694 0.79 +0.9
714,510 + MPMX20_00694 0.80 -3.8
714,515 + MPMX20_00694 0.80 +3.5
714,515 + MPMX20_00694 0.80 +0.1
714,518 - MPMX20_00694 0.80 +1.8
714,523 - MPMX20_00694 0.81 -1.2
714,550 + MPMX20_00694 0.83 +2.2
714,556 - MPMX20_00694 0.83 -2.7
714,558 - MPMX20_00694 0.83 -3.1
714,558 - MPMX20_00694 0.83 +1.6
714,606 + MPMX20_00694 0.87 -1.2
714,614 - MPMX20_00694 0.87 -2.3
714,638 - MPMX20_00694 0.89 -0.6
714,697 + -2.7
714,697 + +0.5
714,727 + -0.7
714,734 + +1.2
714,763 + -1.0
714,771 - -0.7
714,849 - -2.9
714,971 + MPMX20_00695 0.12 -2.2
714,971 + MPMX20_00695 0.12 +2.6
715,063 + MPMX20_00695 0.19 +0.9
715,066 - MPMX20_00695 0.20 +2.8
715,071 - MPMX20_00695 0.20 -0.6
715,091 - MPMX20_00695 0.22 +0.1
715,091 - MPMX20_00695 0.22 -4.1
715,091 - MPMX20_00695 0.22 +0.1
715,105 + MPMX20_00695 0.23 -0.1
715,145 - MPMX20_00695 0.26 -1.0
715,145 - MPMX20_00695 0.26 -3.1
715,220 - MPMX20_00695 0.32 -1.6
715,260 + MPMX20_00695 0.35 +1.5
715,260 + MPMX20_00695 0.35 -2.1
715,275 - MPMX20_00695 0.37 +1.4
715,281 + MPMX20_00695 0.37 +1.6
715,281 + MPMX20_00695 0.37 -3.3
715,281 + MPMX20_00695 0.37 +0.1
715,281 + MPMX20_00695 0.37 -0.2
715,281 + MPMX20_00695 0.37 -1.4
715,281 + MPMX20_00695 0.37 +0.4
715,281 + MPMX20_00695 0.37 -0.4
715,281 + MPMX20_00695 0.37 +1.9
715,281 + MPMX20_00695 0.37 -1.9
715,289 - MPMX20_00695 0.38 -1.4
715,289 - MPMX20_00695 0.38 -1.8
715,289 - MPMX20_00695 0.38 -2.6
715,289 - MPMX20_00695 0.38 -0.5
715,289 - MPMX20_00695 0.38 -1.6
715,289 - MPMX20_00695 0.38 -2.1
715,289 - MPMX20_00695 0.38 -0.0
715,289 - MPMX20_00695 0.38 -2.5
715,294 + MPMX20_00695 0.38 +1.8
715,346 + MPMX20_00695 0.42 +1.1
715,353 + MPMX20_00695 0.43 +2.3
715,353 + MPMX20_00695 0.43 +1.0
715,353 - MPMX20_00695 0.43 -1.8
715,354 - MPMX20_00695 0.43 -1.4
715,361 - MPMX20_00695 0.44 +2.3
715,361 - MPMX20_00695 0.44 +3.5
715,371 - MPMX20_00695 0.44 -1.7
715,436 - MPMX20_00695 0.50 -3.3
715,476 + MPMX20_00695 0.53 -3.1
715,524 + MPMX20_00695 0.57 +1.9
715,607 + MPMX20_00695 0.64 +3.6
715,609 + MPMX20_00695 0.64 -2.4
715,626 - MPMX20_00695 0.65 +1.0
715,629 + MPMX20_00695 0.65 +1.4
715,634 + MPMX20_00695 0.66 +0.0
715,637 - MPMX20_00695 0.66 -1.4
715,642 - MPMX20_00695 0.66 -1.1
715,660 + MPMX20_00695 0.68 +1.4
715,692 + MPMX20_00695 0.70 -0.5
715,692 + MPMX20_00695 0.70 -0.2
715,766 + MPMX20_00695 0.76 +3.9
715,774 - MPMX20_00695 0.77 +0.1
715,932 - MPMX20_00695 0.90 -0.6
715,991 + -0.2
715,999 - +2.2
716,009 - -0.2
716,016 + -2.6
716,016 + +0.4
716,016 + +0.1
716,016 + +2.0
716,016 + -2.3
716,016 + -3.4
716,016 + -2.3
716,016 + +1.1
716,016 + -3.9
716,024 - +3.0
716,024 - -2.8
716,024 - -0.5
716,024 - -2.8
716,065 + -2.3
716,065 + +1.9
716,073 - +0.9
716,073 - -0.4
716,073 - +0.6
716,073 - +2.1
716,113 + -3.9
716,113 + -3.3
716,297 + MPMX20_00696 0.18 -3.4
716,313 - MPMX20_00696 0.20 +2.9
716,405 - MPMX20_00696 0.29 +1.4
716,506 + MPMX20_00696 0.39 +0.4
716,559 - MPMX20_00696 0.44 +0.7
716,566 + MPMX20_00696 0.45 +0.6
716,574 - MPMX20_00696 0.46 +1.6
716,593 + MPMX20_00696 0.48 -0.5
716,636 + MPMX20_00696 0.52 +0.9
716,644 - MPMX20_00696 0.53 -2.0
716,773 - MPMX20_00696 0.66 +1.5
716,818 + MPMX20_00696 0.70 +2.2
716,818 - MPMX20_00696 0.70 +1.5
716,881 - MPMX20_00696 0.76 -2.4
716,888 + MPMX20_00696 0.77 -0.4
716,896 - MPMX20_00696 0.78 -2.5
717,015 - MPMX20_00696 0.90 +0.5

Or see this region's nucleotide sequence