Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00592

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00590 and MPMX20_00591 are separated by 288 nucleotidesMPMX20_00591 and MPMX20_00592 are separated by 50 nucleotidesMPMX20_00592 and MPMX20_00593 are separated by 67 nucleotides MPMX20_00590: MPMX20_00590 - hypothetical protein, at 618,942 to 619,199 _00590 MPMX20_00591: MPMX20_00591 - hypothetical protein, at 619,488 to 620,060 _00591 MPMX20_00592: MPMX20_00592 - hypothetical protein, at 620,111 to 620,341 _00592 MPMX20_00593: MPMX20_00593 - Guanine deaminase, at 620,409 to 621,788 _00593 Position (kb) 620 621Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 619.115 kb on + strand, within MPMX20_00590at 619.115 kb on + strand, within MPMX20_00590at 619.150 kb on + strand, within MPMX20_00590at 619.158 kb on - strand, within MPMX20_00590at 619.163 kb on + strand, within MPMX20_00590at 619.163 kb on + strand, within MPMX20_00590at 619.243 kb on - strandat 619.282 kb on - strandat 619.336 kb on + strandat 619.350 kb on - strandat 619.350 kb on - strandat 619.350 kb on - strandat 619.353 kb on + strandat 619.438 kb on + strandat 619.439 kb on - strandat 619.439 kb on - strandat 619.445 kb on - strandat 619.461 kb on + strandat 619.481 kb on + strandat 619.481 kb on + strandat 619.481 kb on + strandat 619.489 kb on - strandat 619.505 kb on + strandat 619.515 kb on - strandat 619.515 kb on - strandat 619.519 kb on + strandat 619.546 kb on - strand, within MPMX20_00591at 619.553 kb on - strand, within MPMX20_00591at 619.563 kb on + strand, within MPMX20_00591at 619.571 kb on - strand, within MPMX20_00591at 619.571 kb on - strand, within MPMX20_00591at 619.633 kb on + strand, within MPMX20_00591at 619.633 kb on + strand, within MPMX20_00591at 619.641 kb on - strand, within MPMX20_00591at 619.641 kb on - strand, within MPMX20_00591at 619.651 kb on + strand, within MPMX20_00591at 619.658 kb on + strand, within MPMX20_00591at 619.659 kb on - strand, within MPMX20_00591at 619.691 kb on + strand, within MPMX20_00591at 619.691 kb on + strand, within MPMX20_00591at 619.691 kb on + strand, within MPMX20_00591at 619.725 kb on + strand, within MPMX20_00591at 619.725 kb on - strand, within MPMX20_00591at 619.733 kb on - strand, within MPMX20_00591at 619.748 kb on - strand, within MPMX20_00591at 619.755 kb on + strand, within MPMX20_00591at 619.756 kb on - strand, within MPMX20_00591at 619.791 kb on - strand, within MPMX20_00591at 619.794 kb on - strand, within MPMX20_00591at 619.805 kb on + strand, within MPMX20_00591at 619.813 kb on - strand, within MPMX20_00591at 619.851 kb on + strand, within MPMX20_00591at 619.851 kb on + strand, within MPMX20_00591at 619.859 kb on - strand, within MPMX20_00591at 619.859 kb on - strand, within MPMX20_00591at 619.861 kb on + strand, within MPMX20_00591at 619.861 kb on + strand, within MPMX20_00591at 619.863 kb on + strand, within MPMX20_00591at 619.869 kb on - strand, within MPMX20_00591at 619.871 kb on - strand, within MPMX20_00591at 619.892 kb on - strand, within MPMX20_00591at 619.918 kb on + strand, within MPMX20_00591at 619.918 kb on + strand, within MPMX20_00591at 619.918 kb on + strand, within MPMX20_00591at 619.926 kb on - strand, within MPMX20_00591at 619.995 kb on - strand, within MPMX20_00591at 620.064 kb on + strandat 620.064 kb on + strandat 620.072 kb on - strandat 620.072 kb on - strandat 620.072 kb on - strandat 620.072 kb on - strandat 620.078 kb on + strandat 620.086 kb on - strandat 620.086 kb on - strandat 620.117 kb on - strandat 620.127 kb on - strandat 620.159 kb on - strand, within MPMX20_00592at 620.196 kb on - strand, within MPMX20_00592at 620.269 kb on + strand, within MPMX20_00592at 620.287 kb on + strand, within MPMX20_00592at 620.289 kb on + strand, within MPMX20_00592at 620.289 kb on + strand, within MPMX20_00592at 620.297 kb on - strand, within MPMX20_00592at 620.297 kb on - strand, within MPMX20_00592at 620.353 kb on - strandat 620.354 kb on + strandat 620.362 kb on - strandat 620.362 kb on - strandat 620.362 kb on - strandat 620.369 kb on - strandat 620.372 kb on + strandat 620.409 kb on - strandat 620.432 kb on + strandat 620.445 kb on - strandat 620.446 kb on + strandat 620.454 kb on - strandat 620.467 kb on + strandat 620.493 kb on + strandat 620.493 kb on + strandat 620.498 kb on - strandat 620.501 kb on - strandat 620.504 kb on + strandat 620.505 kb on + strandat 620.505 kb on + strandat 620.513 kb on - strandat 620.513 kb on - strandat 620.513 kb on - strandat 620.513 kb on - strandat 620.571 kb on - strand, within MPMX20_00593at 620.589 kb on - strand, within MPMX20_00593at 620.603 kb on + strand, within MPMX20_00593at 620.603 kb on + strand, within MPMX20_00593at 620.603 kb on + strand, within MPMX20_00593at 620.611 kb on - strand, within MPMX20_00593at 620.633 kb on - strand, within MPMX20_00593at 620.634 kb on - strand, within MPMX20_00593at 620.660 kb on + strand, within MPMX20_00593at 620.666 kb on + strand, within MPMX20_00593at 620.700 kb on + strand, within MPMX20_00593at 620.715 kb on + strand, within MPMX20_00593at 620.723 kb on - strand, within MPMX20_00593at 620.769 kb on + strand, within MPMX20_00593at 620.769 kb on + strand, within MPMX20_00593at 620.777 kb on - strand, within MPMX20_00593at 620.805 kb on + strand, within MPMX20_00593at 620.817 kb on + strand, within MPMX20_00593at 620.817 kb on + strand, within MPMX20_00593at 620.817 kb on + strand, within MPMX20_00593at 620.817 kb on + strand, within MPMX20_00593at 620.817 kb on + strand, within MPMX20_00593at 620.817 kb on + strand, within MPMX20_00593at 620.825 kb on - strand, within MPMX20_00593at 620.825 kb on - strand, within MPMX20_00593at 620.825 kb on - strand, within MPMX20_00593at 620.872 kb on + strand, within MPMX20_00593at 620.887 kb on - strand, within MPMX20_00593at 620.969 kb on + strand, within MPMX20_00593at 620.984 kb on + strand, within MPMX20_00593at 620.984 kb on + strand, within MPMX20_00593at 620.984 kb on + strand, within MPMX20_00593at 620.984 kb on + strand, within MPMX20_00593at 620.984 kb on + strand, within MPMX20_00593at 620.992 kb on - strand, within MPMX20_00593at 621.026 kb on - strand, within MPMX20_00593at 621.032 kb on - strand, within MPMX20_00593at 621.085 kb on + strand, within MPMX20_00593at 621.097 kb on + strand, within MPMX20_00593at 621.180 kb on + strand, within MPMX20_00593at 621.180 kb on + strand, within MPMX20_00593at 621.182 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.188 kb on - strand, within MPMX20_00593at 621.240 kb on - strand, within MPMX20_00593at 621.242 kb on + strand, within MPMX20_00593at 621.249 kb on - strand, within MPMX20_00593at 621.260 kb on + strand, within MPMX20_00593at 621.261 kb on - strand, within MPMX20_00593at 621.291 kb on - strand, within MPMX20_00593at 621.310 kb on - strand, within MPMX20_00593at 621.312 kb on - strand, within MPMX20_00593at 621.314 kb on + strand, within MPMX20_00593at 621.317 kb on - strand, within MPMX20_00593

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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619,115 + MPMX20_00590 0.67 -1.4
619,115 + MPMX20_00590 0.67 +1.1
619,150 + MPMX20_00590 0.81 +1.4
619,158 - MPMX20_00590 0.84 +2.6
619,163 + MPMX20_00590 0.86 -1.6
619,163 + MPMX20_00590 0.86 +0.6
619,243 - -2.5
619,282 - -0.0
619,336 + -0.6
619,350 - -2.7
619,350 - +2.0
619,350 - +0.3
619,353 + -0.4
619,438 + +0.5
619,439 - -3.2
619,439 - +1.8
619,445 - -2.1
619,461 + -2.5
619,481 + -2.1
619,481 + +0.1
619,481 + +1.4
619,489 - +2.1
619,505 + +0.5
619,515 - +2.4
619,515 - -1.8
619,519 + -0.8
619,546 - MPMX20_00591 0.10 -0.3
619,553 - MPMX20_00591 0.11 +2.3
619,563 + MPMX20_00591 0.13 -0.8
619,571 - MPMX20_00591 0.14 -2.4
619,571 - MPMX20_00591 0.14 -0.1
619,633 + MPMX20_00591 0.25 +1.1
619,633 + MPMX20_00591 0.25 -3.5
619,641 - MPMX20_00591 0.27 -2.1
619,641 - MPMX20_00591 0.27 -1.5
619,651 + MPMX20_00591 0.28 -3.4
619,658 + MPMX20_00591 0.30 -0.6
619,659 - MPMX20_00591 0.30 +2.1
619,691 + MPMX20_00591 0.35 -2.1
619,691 + MPMX20_00591 0.35 -3.1
619,691 + MPMX20_00591 0.35 -2.8
619,725 + MPMX20_00591 0.41 -0.1
619,725 - MPMX20_00591 0.41 -2.6
619,733 - MPMX20_00591 0.43 +2.0
619,748 - MPMX20_00591 0.45 -2.2
619,755 + MPMX20_00591 0.47 +2.1
619,756 - MPMX20_00591 0.47 -1.6
619,791 - MPMX20_00591 0.53 -2.7
619,794 - MPMX20_00591 0.53 -1.4
619,805 + MPMX20_00591 0.55 -2.1
619,813 - MPMX20_00591 0.57 +0.9
619,851 + MPMX20_00591 0.63 -3.4
619,851 + MPMX20_00591 0.63 -1.0
619,859 - MPMX20_00591 0.65 +0.4
619,859 - MPMX20_00591 0.65 +2.5
619,861 + MPMX20_00591 0.65 +0.7
619,861 + MPMX20_00591 0.65 +2.5
619,863 + MPMX20_00591 0.65 -1.3
619,869 - MPMX20_00591 0.66 +0.4
619,871 - MPMX20_00591 0.67 +4.3
619,892 - MPMX20_00591 0.71 +2.6
619,918 + MPMX20_00591 0.75 +0.7
619,918 + MPMX20_00591 0.75 -0.9
619,918 + MPMX20_00591 0.75 +1.3
619,926 - MPMX20_00591 0.76 -3.7
619,995 - MPMX20_00591 0.88 +2.2
620,064 + -3.0
620,064 + -3.2
620,072 - -1.6
620,072 - +1.5
620,072 - +3.5
620,072 - -0.1
620,078 + -1.8
620,086 - +1.6
620,086 - -0.5
620,117 - -2.2
620,127 - +1.1
620,159 - MPMX20_00592 0.21 -3.7
620,196 - MPMX20_00592 0.37 -1.1
620,269 + MPMX20_00592 0.68 -3.3
620,287 + MPMX20_00592 0.76 -0.3
620,289 + MPMX20_00592 0.77 -3.0
620,289 + MPMX20_00592 0.77 -0.9
620,297 - MPMX20_00592 0.81 -1.9
620,297 - MPMX20_00592 0.81 +0.7
620,353 - +3.8
620,354 + +2.1
620,362 - -0.9
620,362 - +0.2
620,362 - -0.1
620,369 - -0.7
620,372 + +1.6
620,409 - +2.0
620,432 + -2.0
620,445 - +2.6
620,446 + -0.6
620,454 - -0.1
620,467 + -0.3
620,493 + -0.6
620,493 + +1.4
620,498 - -1.3
620,501 - -1.3
620,504 + -0.6
620,505 + +1.1
620,505 + +2.0
620,513 - -0.1
620,513 - -2.7
620,513 - +1.7
620,513 - +0.3
620,571 - MPMX20_00593 0.12 +1.1
620,589 - MPMX20_00593 0.13 +1.4
620,603 + MPMX20_00593 0.14 -2.2
620,603 + MPMX20_00593 0.14 -1.7
620,603 + MPMX20_00593 0.14 -2.3
620,611 - MPMX20_00593 0.15 +3.5
620,633 - MPMX20_00593 0.16 -2.6
620,634 - MPMX20_00593 0.16 -2.1
620,660 + MPMX20_00593 0.18 -2.7
620,666 + MPMX20_00593 0.19 -0.8
620,700 + MPMX20_00593 0.21 -1.6
620,715 + MPMX20_00593 0.22 -2.1
620,723 - MPMX20_00593 0.23 +2.1
620,769 + MPMX20_00593 0.26 -0.4
620,769 + MPMX20_00593 0.26 -0.5
620,777 - MPMX20_00593 0.27 +2.1
620,805 + MPMX20_00593 0.29 -0.1
620,817 + MPMX20_00593 0.30 +2.1
620,817 + MPMX20_00593 0.30 -0.4
620,817 + MPMX20_00593 0.30 +1.1
620,817 + MPMX20_00593 0.30 -2.7
620,817 + MPMX20_00593 0.30 -1.3
620,817 + MPMX20_00593 0.30 -2.6
620,825 - MPMX20_00593 0.30 -0.1
620,825 - MPMX20_00593 0.30 -0.8
620,825 - MPMX20_00593 0.30 -4.0
620,872 + MPMX20_00593 0.34 +0.3
620,887 - MPMX20_00593 0.35 +0.1
620,969 + MPMX20_00593 0.41 +0.6
620,984 + MPMX20_00593 0.42 +1.3
620,984 + MPMX20_00593 0.42 +1.9
620,984 + MPMX20_00593 0.42 +3.1
620,984 + MPMX20_00593 0.42 -2.4
620,984 + MPMX20_00593 0.42 +2.3
620,992 - MPMX20_00593 0.42 -0.1
621,026 - MPMX20_00593 0.45 +0.4
621,032 - MPMX20_00593 0.45 +0.7
621,085 + MPMX20_00593 0.49 -3.1
621,097 + MPMX20_00593 0.50 -0.9
621,180 + MPMX20_00593 0.56 -2.8
621,180 + MPMX20_00593 0.56 -1.5
621,182 - MPMX20_00593 0.56 +2.5
621,188 - MPMX20_00593 0.56 +1.8
621,188 - MPMX20_00593 0.56 +3.2
621,188 - MPMX20_00593 0.56 +3.3
621,188 - MPMX20_00593 0.56 -3.3
621,188 - MPMX20_00593 0.56 +1.8
621,188 - MPMX20_00593 0.56 +0.5
621,188 - MPMX20_00593 0.56 +1.8
621,240 - MPMX20_00593 0.60 +0.3
621,242 + MPMX20_00593 0.60 +1.1
621,249 - MPMX20_00593 0.61 -2.5
621,260 + MPMX20_00593 0.62 +1.5
621,261 - MPMX20_00593 0.62 +2.6
621,291 - MPMX20_00593 0.64 -0.7
621,310 - MPMX20_00593 0.65 +2.9
621,312 - MPMX20_00593 0.65 +2.9
621,314 + MPMX20_00593 0.66 +1.0
621,317 - MPMX20_00593 0.66 -2.5

Or see this region's nucleotide sequence