Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00258

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00257 and MPMX20_00258 are separated by 154 nucleotidesMPMX20_00258 and MPMX20_00259 are separated by 108 nucleotidesMPMX20_00259 and MPMX20_00260 are separated by 63 nucleotides MPMX20_00257: MPMX20_00257 - Glycerol-3-phosphate acyltransferase, at 274,588 to 277,008 _00257 MPMX20_00258: MPMX20_00258 - Diacylglycerol kinase, at 277,163 to 277,531 _00258 MPMX20_00259: MPMX20_00259 - LexA repressor, at 277,640 to 278,248 _00259 MPMX20_00260: MPMX20_00260 - DNA damage-inducible protein F, at 278,312 to 279,649 _00260 Position (kb) 277 278Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 277.060 kb on - strandat 277.087 kb on + strandat 277.087 kb on - strandat 277.094 kb on + strandat 277.102 kb on - strandat 277.104 kb on + strandat 277.123 kb on - strandat 277.128 kb on - strandat 277.174 kb on - strandat 277.176 kb on + strandat 277.189 kb on - strandat 277.195 kb on + strandat 277.195 kb on + strandat 277.203 kb on - strand, within MPMX20_00258at 277.203 kb on - strand, within MPMX20_00258at 277.235 kb on + strand, within MPMX20_00258at 277.235 kb on + strand, within MPMX20_00258at 277.243 kb on - strand, within MPMX20_00258at 277.344 kb on + strand, within MPMX20_00258at 277.344 kb on + strand, within MPMX20_00258at 277.344 kb on + strand, within MPMX20_00258at 277.352 kb on - strand, within MPMX20_00258at 277.352 kb on - strand, within MPMX20_00258at 277.352 kb on - strand, within MPMX20_00258at 277.354 kb on + strand, within MPMX20_00258at 277.396 kb on - strand, within MPMX20_00258at 277.438 kb on - strand, within MPMX20_00258at 277.450 kb on - strand, within MPMX20_00258at 277.456 kb on - strand, within MPMX20_00258at 277.458 kb on - strand, within MPMX20_00258at 277.458 kb on - strand, within MPMX20_00258at 277.495 kb on + strandat 277.500 kb on + strandat 277.510 kb on + strandat 278.269 kb on + strandat 278.274 kb on + strandat 278.274 kb on + strandat 278.274 kb on + strandat 278.282 kb on - strandat 278.284 kb on + strandat 278.392 kb on + strandat 278.512 kb on + strand, within MPMX20_00260at 278.529 kb on + strand, within MPMX20_00260

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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277,060 - +0.1
277,087 + +0.6
277,087 - +1.1
277,094 + -0.5
277,102 - -2.7
277,104 + +0.2
277,123 - -2.9
277,128 - +0.3
277,174 - -0.2
277,176 + +4.2
277,189 - -1.6
277,195 + -0.5
277,195 + +2.1
277,203 - MPMX20_00258 0.11 -0.5
277,203 - MPMX20_00258 0.11 -1.6
277,235 + MPMX20_00258 0.20 -1.6
277,235 + MPMX20_00258 0.20 -1.9
277,243 - MPMX20_00258 0.22 -0.9
277,344 + MPMX20_00258 0.49 -0.5
277,344 + MPMX20_00258 0.49 -2.1
277,344 + MPMX20_00258 0.49 +1.1
277,352 - MPMX20_00258 0.51 -1.4
277,352 - MPMX20_00258 0.51 -0.5
277,352 - MPMX20_00258 0.51 -1.8
277,354 + MPMX20_00258 0.52 -1.2
277,396 - MPMX20_00258 0.63 -1.4
277,438 - MPMX20_00258 0.75 +1.0
277,450 - MPMX20_00258 0.78 -0.9
277,456 - MPMX20_00258 0.79 +0.3
277,458 - MPMX20_00258 0.80 +0.1
277,458 - MPMX20_00258 0.80 -0.4
277,495 + -1.4
277,500 + -1.6
277,510 + -0.5
278,269 + -0.2
278,274 + -0.2
278,274 + +1.2
278,274 + -2.5
278,282 - +2.0
278,284 + -1.7
278,392 + +0.2
278,512 + MPMX20_00260 0.15 +1.2
278,529 + MPMX20_00260 0.16 +2.2

Or see this region's nucleotide sequence