Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00170

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00169 and MPMX20_00170 are separated by 184 nucleotidesMPMX20_00170 and MPMX20_00171 are separated by 161 nucleotides MPMX20_00169: MPMX20_00169 - O-acetyltransferase WecH, at 175,482 to 176,477 _00169 MPMX20_00170: MPMX20_00170 - hypothetical protein, at 176,662 to 176,967 _00170 MPMX20_00171: MPMX20_00171 - Glycine--tRNA ligase alpha subunit, at 177,129 to 178,040 _00171 Position (kb) 176 177Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 175.666 kb on - strand, within MPMX20_00169at 175.690 kb on - strand, within MPMX20_00169at 175.728 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.740 kb on + strand, within MPMX20_00169at 175.748 kb on - strand, within MPMX20_00169at 175.748 kb on - strand, within MPMX20_00169at 175.748 kb on - strand, within MPMX20_00169at 175.850 kb on + strand, within MPMX20_00169at 175.850 kb on + strand, within MPMX20_00169at 175.858 kb on - strand, within MPMX20_00169at 175.858 kb on - strand, within MPMX20_00169at 175.920 kb on + strand, within MPMX20_00169at 175.921 kb on - strand, within MPMX20_00169at 175.930 kb on + strand, within MPMX20_00169at 176.073 kb on - strand, within MPMX20_00169at 176.073 kb on - strand, within MPMX20_00169at 176.154 kb on + strand, within MPMX20_00169at 176.162 kb on - strand, within MPMX20_00169at 176.173 kb on + strand, within MPMX20_00169at 176.183 kb on + strand, within MPMX20_00169at 176.187 kb on + strand, within MPMX20_00169at 176.192 kb on + strand, within MPMX20_00169at 176.200 kb on - strand, within MPMX20_00169at 176.200 kb on - strand, within MPMX20_00169at 176.202 kb on + strand, within MPMX20_00169at 176.208 kb on + strand, within MPMX20_00169at 176.208 kb on + strand, within MPMX20_00169at 176.210 kb on - strand, within MPMX20_00169at 176.210 kb on - strand, within MPMX20_00169at 176.220 kb on + strand, within MPMX20_00169at 176.220 kb on + strand, within MPMX20_00169at 176.228 kb on - strand, within MPMX20_00169at 176.228 kb on - strand, within MPMX20_00169at 176.315 kb on - strand, within MPMX20_00169at 176.320 kb on - strand, within MPMX20_00169at 176.322 kb on + strand, within MPMX20_00169at 176.335 kb on + strand, within MPMX20_00169at 176.337 kb on + strand, within MPMX20_00169at 176.337 kb on + strand, within MPMX20_00169at 176.363 kb on + strand, within MPMX20_00169at 176.369 kb on + strand, within MPMX20_00169at 176.369 kb on + strand, within MPMX20_00169at 176.369 kb on + strand, within MPMX20_00169at 176.371 kb on - strand, within MPMX20_00169at 176.377 kb on - strand, within MPMX20_00169at 176.377 kb on - strand, within MPMX20_00169at 176.377 kb on - strand, within MPMX20_00169at 176.379 kb on + strandat 176.423 kb on + strandat 176.431 kb on - strandat 176.442 kb on - strandat 176.445 kb on - strandat 176.475 kb on + strandat 176.483 kb on - strandat 176.483 kb on - strandat 176.506 kb on + strandat 176.528 kb on + strandat 176.563 kb on + strandat 176.593 kb on + strandat 176.638 kb on + strandat 176.643 kb on + strandat 176.646 kb on - strandat 176.675 kb on + strandat 176.680 kb on - strandat 176.688 kb on - strandat 176.688 kb on - strandat 176.688 kb on - strandat 176.688 kb on - strandat 176.715 kb on + strand, within MPMX20_00170at 176.727 kb on - strand, within MPMX20_00170at 176.729 kb on + strand, within MPMX20_00170at 176.735 kb on - strand, within MPMX20_00170at 176.735 kb on - strand, within MPMX20_00170at 176.735 kb on - strand, within MPMX20_00170at 176.752 kb on - strand, within MPMX20_00170at 176.773 kb on - strand, within MPMX20_00170at 176.783 kb on + strand, within MPMX20_00170at 176.788 kb on + strand, within MPMX20_00170at 176.801 kb on - strand, within MPMX20_00170at 176.802 kb on + strand, within MPMX20_00170at 176.810 kb on - strand, within MPMX20_00170at 176.810 kb on - strand, within MPMX20_00170at 176.819 kb on + strand, within MPMX20_00170at 176.840 kb on + strand, within MPMX20_00170at 176.840 kb on + strand, within MPMX20_00170at 176.840 kb on + strand, within MPMX20_00170at 176.848 kb on - strand, within MPMX20_00170at 176.848 kb on - strand, within MPMX20_00170at 176.848 kb on - strand, within MPMX20_00170at 176.884 kb on - strand, within MPMX20_00170at 176.884 kb on - strand, within MPMX20_00170at 176.884 kb on - strand, within MPMX20_00170at 176.899 kb on - strand, within MPMX20_00170at 176.913 kb on - strand, within MPMX20_00170at 176.933 kb on - strand, within MPMX20_00170at 176.933 kb on - strand, within MPMX20_00170at 176.961 kb on + strandat 177.039 kb on + strandat 177.049 kb on + strandat 177.057 kb on + strandat 177.079 kb on + strandat 177.086 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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175,666 - MPMX20_00169 0.18 +0.2
175,690 - MPMX20_00169 0.21 -0.2
175,728 + MPMX20_00169 0.25 -3.5
175,740 + MPMX20_00169 0.26 -2.1
175,740 + MPMX20_00169 0.26 -3.5
175,740 + MPMX20_00169 0.26 -1.7
175,740 + MPMX20_00169 0.26 -0.1
175,740 + MPMX20_00169 0.26 -0.6
175,740 + MPMX20_00169 0.26 +0.2
175,740 + MPMX20_00169 0.26 +1.3
175,740 + MPMX20_00169 0.26 +2.1
175,748 - MPMX20_00169 0.27 -0.8
175,748 - MPMX20_00169 0.27 +2.2
175,748 - MPMX20_00169 0.27 +1.2
175,850 + MPMX20_00169 0.37 +0.9
175,850 + MPMX20_00169 0.37 +1.6
175,858 - MPMX20_00169 0.38 -3.2
175,858 - MPMX20_00169 0.38 +2.0
175,920 + MPMX20_00169 0.44 -2.7
175,921 - MPMX20_00169 0.44 -0.4
175,930 + MPMX20_00169 0.45 +1.8
176,073 - MPMX20_00169 0.59 -2.2
176,073 - MPMX20_00169 0.59 +0.8
176,154 + MPMX20_00169 0.67 +0.6
176,162 - MPMX20_00169 0.68 +0.6
176,173 + MPMX20_00169 0.69 -2.2
176,183 + MPMX20_00169 0.70 +2.8
176,187 + MPMX20_00169 0.71 +0.1
176,192 + MPMX20_00169 0.71 -2.7
176,200 - MPMX20_00169 0.72 +0.1
176,200 - MPMX20_00169 0.72 +0.7
176,202 + MPMX20_00169 0.72 +1.5
176,208 + MPMX20_00169 0.73 -3.1
176,208 + MPMX20_00169 0.73 +0.9
176,210 - MPMX20_00169 0.73 -1.6
176,210 - MPMX20_00169 0.73 +0.4
176,220 + MPMX20_00169 0.74 -0.7
176,220 + MPMX20_00169 0.74 -2.6
176,228 - MPMX20_00169 0.75 +0.1
176,228 - MPMX20_00169 0.75 +3.2
176,315 - MPMX20_00169 0.84 -0.4
176,320 - MPMX20_00169 0.84 -0.9
176,322 + MPMX20_00169 0.84 -0.2
176,335 + MPMX20_00169 0.86 +0.2
176,337 + MPMX20_00169 0.86 -1.9
176,337 + MPMX20_00169 0.86 +0.1
176,363 + MPMX20_00169 0.88 -0.8
176,369 + MPMX20_00169 0.89 -1.1
176,369 + MPMX20_00169 0.89 +0.1
176,369 + MPMX20_00169 0.89 +0.9
176,371 - MPMX20_00169 0.89 -0.8
176,377 - MPMX20_00169 0.90 -2.5
176,377 - MPMX20_00169 0.90 -1.4
176,377 - MPMX20_00169 0.90 +1.8
176,379 + +1.7
176,423 + -3.8
176,431 - +0.6
176,442 - +0.1
176,445 - -3.3
176,475 + +2.1
176,483 - -1.0
176,483 - +1.4
176,506 + -0.9
176,528 + -1.2
176,563 + -1.8
176,593 + +1.6
176,638 + +0.6
176,643 + -1.6
176,646 - +2.0
176,675 + +0.6
176,680 - -2.5
176,688 - +2.2
176,688 - -2.2
176,688 - +0.2
176,688 - +0.2
176,715 + MPMX20_00170 0.17 -2.7
176,727 - MPMX20_00170 0.21 +2.8
176,729 + MPMX20_00170 0.22 +0.6
176,735 - MPMX20_00170 0.24 +0.2
176,735 - MPMX20_00170 0.24 +4.2
176,735 - MPMX20_00170 0.24 +0.6
176,752 - MPMX20_00170 0.29 +1.3
176,773 - MPMX20_00170 0.36 -0.1
176,783 + MPMX20_00170 0.40 +2.9
176,788 + MPMX20_00170 0.41 +1.2
176,801 - MPMX20_00170 0.45 +0.9
176,802 + MPMX20_00170 0.46 -1.7
176,810 - MPMX20_00170 0.48 +0.1
176,810 - MPMX20_00170 0.48 +1.3
176,819 + MPMX20_00170 0.51 +3.4
176,840 + MPMX20_00170 0.58 -0.9
176,840 + MPMX20_00170 0.58 -0.5
176,840 + MPMX20_00170 0.58 -3.0
176,848 - MPMX20_00170 0.61 +0.6
176,848 - MPMX20_00170 0.61 +1.0
176,848 - MPMX20_00170 0.61 -1.3
176,884 - MPMX20_00170 0.73 -2.5
176,884 - MPMX20_00170 0.73 -2.1
176,884 - MPMX20_00170 0.73 -0.4
176,899 - MPMX20_00170 0.77 +0.7
176,913 - MPMX20_00170 0.82 +1.1
176,933 - MPMX20_00170 0.89 +4.5
176,933 - MPMX20_00170 0.89 -2.7
176,961 + -2.2
177,039 + -0.4
177,049 + -0.7
177,057 + -2.0
177,079 + -0.9
177,086 - -0.9

Or see this region's nucleotide sequence