Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00117

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00116 and MPMX20_00117 are separated by 30 nucleotidesMPMX20_00117 and MPMX20_00118 are separated by 15 nucleotides MPMX20_00116: MPMX20_00116 - L-threonine 3-dehydrogenase, at 117,435 to 118,460 _00116 MPMX20_00117: MPMX20_00117 - hypothetical protein, at 118,491 to 119,405 _00117 MPMX20_00118: MPMX20_00118 - D-inositol-3-phosphate glycosyltransferase, at 119,421 to 120,626 _00118 Position (kb) 118 119 120Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 117.572 kb on - strand, within MPMX20_00116at 117.641 kb on + strand, within MPMX20_00116at 117.674 kb on - strand, within MPMX20_00116at 117.694 kb on - strand, within MPMX20_00116at 117.701 kb on - strand, within MPMX20_00116at 117.755 kb on - strand, within MPMX20_00116at 117.755 kb on - strand, within MPMX20_00116at 117.774 kb on + strand, within MPMX20_00116at 117.774 kb on + strand, within MPMX20_00116at 117.774 kb on + strand, within MPMX20_00116at 117.782 kb on - strand, within MPMX20_00116at 117.911 kb on - strand, within MPMX20_00116at 117.918 kb on - strand, within MPMX20_00116at 117.980 kb on + strand, within MPMX20_00116at 118.064 kb on - strand, within MPMX20_00116at 118.140 kb on + strand, within MPMX20_00116at 118.141 kb on + strand, within MPMX20_00116at 118.141 kb on + strand, within MPMX20_00116at 118.179 kb on + strand, within MPMX20_00116at 118.187 kb on - strand, within MPMX20_00116at 118.260 kb on - strand, within MPMX20_00116at 118.265 kb on + strand, within MPMX20_00116at 118.280 kb on + strand, within MPMX20_00116at 118.305 kb on - strand, within MPMX20_00116at 118.325 kb on - strand, within MPMX20_00116at 118.337 kb on + strand, within MPMX20_00116at 118.347 kb on + strand, within MPMX20_00116at 118.347 kb on + strand, within MPMX20_00116at 118.348 kb on + strand, within MPMX20_00116at 118.355 kb on - strand, within MPMX20_00116at 118.355 kb on - strand, within MPMX20_00116at 118.356 kb on - strand, within MPMX20_00116at 118.402 kb on - strandat 118.405 kb on + strandat 118.405 kb on + strandat 118.425 kb on + strandat 118.428 kb on - strandat 118.428 kb on - strandat 118.438 kb on + strandat 118.446 kb on - strandat 118.549 kb on + strandat 118.570 kb on - strandat 118.725 kb on + strand, within MPMX20_00117at 118.756 kb on + strand, within MPMX20_00117at 118.756 kb on + strand, within MPMX20_00117at 118.764 kb on - strand, within MPMX20_00117at 118.781 kb on + strand, within MPMX20_00117at 118.789 kb on - strand, within MPMX20_00117at 118.792 kb on + strand, within MPMX20_00117at 118.800 kb on - strand, within MPMX20_00117at 118.802 kb on + strand, within MPMX20_00117at 118.810 kb on - strand, within MPMX20_00117at 118.851 kb on - strand, within MPMX20_00117at 118.879 kb on + strand, within MPMX20_00117at 118.887 kb on - strand, within MPMX20_00117at 118.916 kb on - strand, within MPMX20_00117at 118.951 kb on + strand, within MPMX20_00117at 118.951 kb on + strand, within MPMX20_00117at 118.959 kb on - strand, within MPMX20_00117at 118.979 kb on - strand, within MPMX20_00117at 118.985 kb on - strand, within MPMX20_00117at 119.061 kb on - strand, within MPMX20_00117at 119.079 kb on - strand, within MPMX20_00117at 119.081 kb on + strand, within MPMX20_00117at 119.103 kb on - strand, within MPMX20_00117at 119.121 kb on - strand, within MPMX20_00117at 119.230 kb on + strand, within MPMX20_00117at 119.230 kb on + strand, within MPMX20_00117at 119.264 kb on - strand, within MPMX20_00117at 119.346 kb on + strandat 119.353 kb on + strandat 119.353 kb on + strandat 119.354 kb on - strandat 119.361 kb on - strandat 119.361 kb on - strandat 119.380 kb on - strandat 119.404 kb on - strandat 119.441 kb on + strandat 119.462 kb on + strandat 119.477 kb on - strandat 119.505 kb on + strandat 119.513 kb on - strandat 119.542 kb on + strand, within MPMX20_00118at 119.550 kb on - strand, within MPMX20_00118at 119.572 kb on - strand, within MPMX20_00118at 119.583 kb on - strand, within MPMX20_00118at 119.586 kb on + strand, within MPMX20_00118at 119.623 kb on + strand, within MPMX20_00118at 119.633 kb on + strand, within MPMX20_00118at 119.633 kb on + strand, within MPMX20_00118at 119.641 kb on - strand, within MPMX20_00118at 119.693 kb on - strand, within MPMX20_00118at 119.738 kb on + strand, within MPMX20_00118at 119.762 kb on - strand, within MPMX20_00118at 119.799 kb on + strand, within MPMX20_00118at 119.866 kb on + strand, within MPMX20_00118at 119.910 kb on - strand, within MPMX20_00118at 119.910 kb on - strand, within MPMX20_00118at 119.976 kb on - strand, within MPMX20_00118at 120.001 kb on + strand, within MPMX20_00118at 120.009 kb on - strand, within MPMX20_00118at 120.030 kb on + strand, within MPMX20_00118at 120.030 kb on + strand, within MPMX20_00118at 120.030 kb on + strand, within MPMX20_00118at 120.035 kb on + strand, within MPMX20_00118at 120.037 kb on + strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.038 kb on - strand, within MPMX20_00118at 120.040 kb on + strand, within MPMX20_00118at 120.045 kb on - strand, within MPMX20_00118at 120.045 kb on - strand, within MPMX20_00118at 120.047 kb on + strand, within MPMX20_00118at 120.047 kb on + strand, within MPMX20_00118at 120.047 kb on + strand, within MPMX20_00118at 120.055 kb on - strand, within MPMX20_00118at 120.055 kb on - strand, within MPMX20_00118at 120.055 kb on - strand, within MPMX20_00118at 120.055 kb on - strand, within MPMX20_00118at 120.130 kb on + strand, within MPMX20_00118at 120.143 kb on - strand, within MPMX20_00118at 120.171 kb on + strand, within MPMX20_00118at 120.194 kb on + strand, within MPMX20_00118at 120.202 kb on - strand, within MPMX20_00118at 120.202 kb on - strand, within MPMX20_00118at 120.202 kb on - strand, within MPMX20_00118at 120.204 kb on + strand, within MPMX20_00118at 120.215 kb on - strand, within MPMX20_00118at 120.259 kb on + strand, within MPMX20_00118at 120.263 kb on + strand, within MPMX20_00118at 120.268 kb on + strand, within MPMX20_00118at 120.276 kb on - strand, within MPMX20_00118at 120.276 kb on - strand, within MPMX20_00118at 120.305 kb on + strand, within MPMX20_00118at 120.310 kb on + strand, within MPMX20_00118at 120.318 kb on - strand, within MPMX20_00118at 120.348 kb on + strand, within MPMX20_00118at 120.378 kb on + strand, within MPMX20_00118

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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117,572 - MPMX20_00116 0.13 +1.8
117,641 + MPMX20_00116 0.20 +0.9
117,674 - MPMX20_00116 0.23 +1.8
117,694 - MPMX20_00116 0.25 +2.6
117,701 - MPMX20_00116 0.26 +0.4
117,755 - MPMX20_00116 0.31 -3.7
117,755 - MPMX20_00116 0.31 -0.7
117,774 + MPMX20_00116 0.33 -2.2
117,774 + MPMX20_00116 0.33 +1.6
117,774 + MPMX20_00116 0.33 +0.0
117,782 - MPMX20_00116 0.34 +1.2
117,911 - MPMX20_00116 0.46 +1.5
117,918 - MPMX20_00116 0.47 +2.3
117,980 + MPMX20_00116 0.53 +2.5
118,064 - MPMX20_00116 0.61 +0.5
118,140 + MPMX20_00116 0.69 -3.2
118,141 + MPMX20_00116 0.69 +1.7
118,141 + MPMX20_00116 0.69 -1.9
118,179 + MPMX20_00116 0.73 +0.5
118,187 - MPMX20_00116 0.73 -3.4
118,260 - MPMX20_00116 0.80 -2.0
118,265 + MPMX20_00116 0.81 +2.6
118,280 + MPMX20_00116 0.82 +0.4
118,305 - MPMX20_00116 0.85 -3.4
118,325 - MPMX20_00116 0.87 +0.9
118,337 + MPMX20_00116 0.88 +0.6
118,347 + MPMX20_00116 0.89 +1.1
118,347 + MPMX20_00116 0.89 +0.5
118,348 + MPMX20_00116 0.89 +0.4
118,355 - MPMX20_00116 0.90 -1.8
118,355 - MPMX20_00116 0.90 -0.9
118,356 - MPMX20_00116 0.90 -0.8
118,402 - -0.2
118,405 + +0.2
118,405 + -1.8
118,425 + +2.1
118,428 - -3.7
118,428 - -0.2
118,438 + +1.3
118,446 - +1.8
118,549 + +2.4
118,570 - +1.0
118,725 + MPMX20_00117 0.26 +0.2
118,756 + MPMX20_00117 0.29 +2.3
118,756 + MPMX20_00117 0.29 -2.2
118,764 - MPMX20_00117 0.30 -0.4
118,781 + MPMX20_00117 0.32 -0.2
118,789 - MPMX20_00117 0.33 +1.8
118,792 + MPMX20_00117 0.33 +2.2
118,800 - MPMX20_00117 0.34 -3.5
118,802 + MPMX20_00117 0.34 +1.8
118,810 - MPMX20_00117 0.35 +0.9
118,851 - MPMX20_00117 0.39 -3.1
118,879 + MPMX20_00117 0.42 +2.3
118,887 - MPMX20_00117 0.43 +0.6
118,916 - MPMX20_00117 0.46 -2.8
118,951 + MPMX20_00117 0.50 +2.3
118,951 + MPMX20_00117 0.50 +0.6
118,959 - MPMX20_00117 0.51 +1.2
118,979 - MPMX20_00117 0.53 +2.4
118,985 - MPMX20_00117 0.54 +0.8
119,061 - MPMX20_00117 0.62 -2.3
119,079 - MPMX20_00117 0.64 +2.0
119,081 + MPMX20_00117 0.64 +0.6
119,103 - MPMX20_00117 0.67 +3.0
119,121 - MPMX20_00117 0.69 -3.2
119,230 + MPMX20_00117 0.81 +1.2
119,230 + MPMX20_00117 0.81 -0.5
119,264 - MPMX20_00117 0.84 +2.0
119,346 + +1.5
119,353 + +2.7
119,353 + -2.9
119,354 - +0.6
119,361 - -2.4
119,361 - -3.0
119,380 - -2.7
119,404 - -1.1
119,441 + +1.6
119,462 + +0.1
119,477 - +1.7
119,505 + +1.3
119,513 - +2.0
119,542 + MPMX20_00118 0.10 +1.0
119,550 - MPMX20_00118 0.11 +2.4
119,572 - MPMX20_00118 0.13 -0.6
119,583 - MPMX20_00118 0.13 +0.2
119,586 + MPMX20_00118 0.14 -2.4
119,623 + MPMX20_00118 0.17 -2.1
119,633 + MPMX20_00118 0.18 -0.6
119,633 + MPMX20_00118 0.18 +0.4
119,641 - MPMX20_00118 0.18 -3.8
119,693 - MPMX20_00118 0.23 +3.4
119,738 + MPMX20_00118 0.26 +1.9
119,762 - MPMX20_00118 0.28 -3.5
119,799 + MPMX20_00118 0.31 +3.2
119,866 + MPMX20_00118 0.37 +0.2
119,910 - MPMX20_00118 0.41 +0.8
119,910 - MPMX20_00118 0.41 -2.9
119,976 - MPMX20_00118 0.46 -0.7
120,001 + MPMX20_00118 0.48 +2.9
120,009 - MPMX20_00118 0.49 -2.5
120,030 + MPMX20_00118 0.50 +1.0
120,030 + MPMX20_00118 0.50 -4.2
120,030 + MPMX20_00118 0.50 -1.4
120,035 + MPMX20_00118 0.51 -2.8
120,037 + MPMX20_00118 0.51 -3.6
120,038 - MPMX20_00118 0.51 -1.7
120,038 - MPMX20_00118 0.51 +1.9
120,038 - MPMX20_00118 0.51 +1.2
120,038 - MPMX20_00118 0.51 -1.5
120,038 - MPMX20_00118 0.51 -1.5
120,038 - MPMX20_00118 0.51 +2.6
120,038 - MPMX20_00118 0.51 +3.6
120,038 - MPMX20_00118 0.51 -0.1
120,040 + MPMX20_00118 0.51 -3.0
120,045 - MPMX20_00118 0.52 -1.1
120,045 - MPMX20_00118 0.52 +0.8
120,047 + MPMX20_00118 0.52 +1.0
120,047 + MPMX20_00118 0.52 +3.6
120,047 + MPMX20_00118 0.52 +1.6
120,055 - MPMX20_00118 0.53 +0.2
120,055 - MPMX20_00118 0.53 -0.1
120,055 - MPMX20_00118 0.53 +0.7
120,055 - MPMX20_00118 0.53 +1.7
120,130 + MPMX20_00118 0.59 +1.0
120,143 - MPMX20_00118 0.60 -1.2
120,171 + MPMX20_00118 0.62 -2.3
120,194 + MPMX20_00118 0.64 -0.2
120,202 - MPMX20_00118 0.65 +1.8
120,202 - MPMX20_00118 0.65 -2.5
120,202 - MPMX20_00118 0.65 +1.8
120,204 + MPMX20_00118 0.65 -0.1
120,215 - MPMX20_00118 0.66 -0.2
120,259 + MPMX20_00118 0.69 +1.0
120,263 + MPMX20_00118 0.70 +0.2
120,268 + MPMX20_00118 0.70 +1.4
120,276 - MPMX20_00118 0.71 -2.6
120,276 - MPMX20_00118 0.71 +2.1
120,305 + MPMX20_00118 0.73 -2.5
120,310 + MPMX20_00118 0.74 -2.0
120,318 - MPMX20_00118 0.74 -3.3
120,348 + MPMX20_00118 0.77 +0.1
120,378 + MPMX20_00118 0.79 -0.5

Or see this region's nucleotide sequence