Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00091

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00089 and MPMX20_00090 are separated by 68 nucleotidesMPMX20_00090 and MPMX20_00091 are separated by 251 nucleotidesMPMX20_00091 and MPMX20_00092 are separated by 125 nucleotidesMPMX20_00092 and MPMX20_00093 are separated by 68 nucleotides MPMX20_00089: MPMX20_00089 - DNA ligase B, at 92,075 to 93,745 _00089 MPMX20_00090: MPMX20_00090 - hypothetical protein, at 93,814 to 94,431 _00090 MPMX20_00091: MPMX20_00091 - hypothetical protein, at 94,683 to 95,546 _00091 MPMX20_00092: MPMX20_00092 - Ribonuclease PH, at 95,672 to 96,388 _00092 MPMX20_00093: MPMX20_00093 - Orotate phosphoribosyltransferase, at 96,457 to 97,098 _00093 Position (kb) 94 95 96Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 93.687 kb on + strandat 93.712 kb on - strandat 93.731 kb on - strandat 93.813 kb on + strandat 93.817 kb on + strandat 93.821 kb on - strandat 93.821 kb on - strandat 93.882 kb on - strand, within MPMX20_00090at 93.919 kb on - strand, within MPMX20_00090at 93.960 kb on - strand, within MPMX20_00090at 93.981 kb on - strand, within MPMX20_00090at 93.981 kb on - strand, within MPMX20_00090at 93.983 kb on + strand, within MPMX20_00090at 94.008 kb on + strand, within MPMX20_00090at 94.011 kb on - strand, within MPMX20_00090at 94.016 kb on - strand, within MPMX20_00090at 94.041 kb on - strand, within MPMX20_00090at 94.065 kb on - strand, within MPMX20_00090at 94.084 kb on + strand, within MPMX20_00090at 94.091 kb on - strand, within MPMX20_00090at 94.097 kb on + strand, within MPMX20_00090at 94.097 kb on + strand, within MPMX20_00090at 94.105 kb on - strand, within MPMX20_00090at 94.180 kb on - strand, within MPMX20_00090at 94.191 kb on - strand, within MPMX20_00090at 94.207 kb on + strand, within MPMX20_00090at 94.207 kb on + strand, within MPMX20_00090at 94.208 kb on - strand, within MPMX20_00090at 94.208 kb on - strand, within MPMX20_00090at 94.215 kb on - strand, within MPMX20_00090at 94.234 kb on - strand, within MPMX20_00090at 94.251 kb on + strand, within MPMX20_00090at 94.276 kb on - strand, within MPMX20_00090at 94.311 kb on + strand, within MPMX20_00090at 94.338 kb on + strand, within MPMX20_00090at 94.338 kb on + strand, within MPMX20_00090at 94.346 kb on - strand, within MPMX20_00090at 94.346 kb on - strand, within MPMX20_00090at 94.346 kb on - strand, within MPMX20_00090at 94.346 kb on - strand, within MPMX20_00090at 94.381 kb on + strandat 94.381 kb on + strandat 94.458 kb on - strandat 94.681 kb on - strandat 94.754 kb on + strandat 94.762 kb on - strandat 94.762 kb on - strandat 94.767 kb on - strandat 94.898 kb on - strand, within MPMX20_00091at 94.898 kb on - strand, within MPMX20_00091at 95.055 kb on + strand, within MPMX20_00091at 95.108 kb on - strand, within MPMX20_00091at 95.142 kb on + strand, within MPMX20_00091at 95.150 kb on - strand, within MPMX20_00091at 95.150 kb on - strand, within MPMX20_00091at 95.204 kb on + strand, within MPMX20_00091at 95.212 kb on - strand, within MPMX20_00091at 95.212 kb on - strand, within MPMX20_00091at 95.212 kb on - strand, within MPMX20_00091at 95.286 kb on - strand, within MPMX20_00091at 95.373 kb on + strand, within MPMX20_00091at 95.381 kb on - strand, within MPMX20_00091at 95.416 kb on - strand, within MPMX20_00091at 95.424 kb on - strand, within MPMX20_00091at 95.470 kb on - strandat 95.470 kb on - strandat 95.470 kb on - strandat 95.477 kb on + strandat 95.502 kb on - strandat 95.574 kb on - strandat 95.587 kb on - strandat 95.597 kb on + strandat 95.696 kb on + strandat 95.714 kb on + strandat 95.722 kb on - strandat 95.722 kb on - strandat 95.748 kb on + strand, within MPMX20_00092at 95.758 kb on + strand, within MPMX20_00092at 95.780 kb on + strand, within MPMX20_00092at 95.790 kb on - strand, within MPMX20_00092at 95.828 kb on + strand, within MPMX20_00092at 95.828 kb on + strand, within MPMX20_00092at 95.828 kb on + strand, within MPMX20_00092at 95.858 kb on - strand, within MPMX20_00092at 95.879 kb on + strand, within MPMX20_00092at 95.879 kb on + strand, within MPMX20_00092at 95.887 kb on - strand, within MPMX20_00092at 95.955 kb on + strand, within MPMX20_00092at 95.955 kb on + strand, within MPMX20_00092at 96.008 kb on + strand, within MPMX20_00092at 96.016 kb on - strand, within MPMX20_00092at 96.016 kb on - strand, within MPMX20_00092at 96.016 kb on - strand, within MPMX20_00092at 96.041 kb on + strand, within MPMX20_00092at 96.097 kb on - strand, within MPMX20_00092at 96.103 kb on + strand, within MPMX20_00092at 96.118 kb on + strand, within MPMX20_00092at 96.118 kb on + strand, within MPMX20_00092at 96.217 kb on - strand, within MPMX20_00092at 96.218 kb on + strand, within MPMX20_00092at 96.227 kb on + strand, within MPMX20_00092at 96.274 kb on + strand, within MPMX20_00092at 96.274 kb on + strand, within MPMX20_00092at 96.276 kb on - strand, within MPMX20_00092at 96.287 kb on + strand, within MPMX20_00092at 96.300 kb on + strand, within MPMX20_00092at 96.406 kb on - strandat 96.446 kb on + strandat 96.479 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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93,687 + +0.5
93,712 - -2.8
93,731 - -0.4
93,813 + +2.0
93,817 + -0.1
93,821 - +0.9
93,821 - -0.1
93,882 - MPMX20_00090 0.11 +0.1
93,919 - MPMX20_00090 0.17 +0.6
93,960 - MPMX20_00090 0.24 -1.4
93,981 - MPMX20_00090 0.27 -3.4
93,981 - MPMX20_00090 0.27 -0.4
93,983 + MPMX20_00090 0.27 -1.6
94,008 + MPMX20_00090 0.31 +2.2
94,011 - MPMX20_00090 0.32 -3.1
94,016 - MPMX20_00090 0.33 -1.0
94,041 - MPMX20_00090 0.37 -0.2
94,065 - MPMX20_00090 0.41 +2.4
94,084 + MPMX20_00090 0.44 -1.6
94,091 - MPMX20_00090 0.45 +2.2
94,097 + MPMX20_00090 0.46 -0.9
94,097 + MPMX20_00090 0.46 -0.2
94,105 - MPMX20_00090 0.47 +1.8
94,180 - MPMX20_00090 0.59 -1.2
94,191 - MPMX20_00090 0.61 -1.0
94,207 + MPMX20_00090 0.64 -1.7
94,207 + MPMX20_00090 0.64 +1.3
94,208 - MPMX20_00090 0.64 +0.6
94,208 - MPMX20_00090 0.64 +0.1
94,215 - MPMX20_00090 0.65 +0.5
94,234 - MPMX20_00090 0.68 -0.3
94,251 + MPMX20_00090 0.71 -3.0
94,276 - MPMX20_00090 0.75 -3.4
94,311 + MPMX20_00090 0.80 +1.1
94,338 + MPMX20_00090 0.85 -2.8
94,338 + MPMX20_00090 0.85 -1.2
94,346 - MPMX20_00090 0.86 -2.6
94,346 - MPMX20_00090 0.86 -4.1
94,346 - MPMX20_00090 0.86 -1.1
94,346 - MPMX20_00090 0.86 +1.9
94,381 + +2.0
94,381 + -1.1
94,458 - +1.7
94,681 - -2.0
94,754 + -3.0
94,762 - +0.9
94,762 - +0.4
94,767 - -2.1
94,898 - MPMX20_00091 0.25 -1.1
94,898 - MPMX20_00091 0.25 +3.5
95,055 + MPMX20_00091 0.43 +1.5
95,108 - MPMX20_00091 0.49 +2.4
95,142 + MPMX20_00091 0.53 +0.1
95,150 - MPMX20_00091 0.54 -0.4
95,150 - MPMX20_00091 0.54 +3.0
95,204 + MPMX20_00091 0.60 +0.1
95,212 - MPMX20_00091 0.61 +1.5
95,212 - MPMX20_00091 0.61 -2.5
95,212 - MPMX20_00091 0.61 +1.3
95,286 - MPMX20_00091 0.70 +1.4
95,373 + MPMX20_00091 0.80 +2.0
95,381 - MPMX20_00091 0.81 +2.3
95,416 - MPMX20_00091 0.85 -0.4
95,424 - MPMX20_00091 0.86 -2.4
95,470 - +2.9
95,470 - -1.2
95,470 - -0.1
95,477 + +1.7
95,502 - +1.2
95,574 - -2.7
95,587 - +0.1
95,597 + -2.0
95,696 + -0.6
95,714 + +0.3
95,722 - -1.8
95,722 - -2.2
95,748 + MPMX20_00092 0.11 -1.4
95,758 + MPMX20_00092 0.12 +2.4
95,780 + MPMX20_00092 0.15 -3.6
95,790 - MPMX20_00092 0.16 +1.7
95,828 + MPMX20_00092 0.22 +1.5
95,828 + MPMX20_00092 0.22 -3.2
95,828 + MPMX20_00092 0.22 -3.1
95,858 - MPMX20_00092 0.26 -2.2
95,879 + MPMX20_00092 0.29 -3.4
95,879 + MPMX20_00092 0.29 -0.6
95,887 - MPMX20_00092 0.30 +1.8
95,955 + MPMX20_00092 0.39 -3.2
95,955 + MPMX20_00092 0.39 -2.3
96,008 + MPMX20_00092 0.47 -3.3
96,016 - MPMX20_00092 0.48 -0.4
96,016 - MPMX20_00092 0.48 -2.9
96,016 - MPMX20_00092 0.48 +0.4
96,041 + MPMX20_00092 0.51 +0.6
96,097 - MPMX20_00092 0.59 -2.6
96,103 + MPMX20_00092 0.60 -3.7
96,118 + MPMX20_00092 0.62 +1.7
96,118 + MPMX20_00092 0.62 +0.9
96,217 - MPMX20_00092 0.76 -0.6
96,218 + MPMX20_00092 0.76 +1.5
96,227 + MPMX20_00092 0.77 -0.6
96,274 + MPMX20_00092 0.84 -0.0
96,274 + MPMX20_00092 0.84 -3.6
96,276 - MPMX20_00092 0.84 +2.0
96,287 + MPMX20_00092 0.86 +1.8
96,300 + MPMX20_00092 0.88 -2.3
96,406 - -3.4
96,446 + +0.1
96,479 - -2.3

Or see this region's nucleotide sequence