Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00089 and MPMX20_00090 are separated by 68 nucleotides MPMX20_00090 and MPMX20_00091 are separated by 251 nucleotides MPMX20_00091 and MPMX20_00092 are separated by 125 nucleotides MPMX20_00092 and MPMX20_00093 are separated by 68 nucleotides
MPMX20_00089: MPMX20_00089 - DNA ligase B, at 92,075 to 93,745
_00089
MPMX20_00090: MPMX20_00090 - hypothetical protein, at 93,814 to 94,431
_00090
MPMX20_00091: MPMX20_00091 - hypothetical protein, at 94,683 to 95,546
_00091
MPMX20_00092: MPMX20_00092 - Ribonuclease PH, at 95,672 to 96,388
_00092
MPMX20_00093: MPMX20_00093 - Orotate phosphoribosyltransferase, at 96,457 to 97,098
_00093
Position (kb)
94
95
96 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 93.687 kb on + strand at 93.712 kb on - strand at 93.731 kb on - strand at 93.813 kb on + strand at 93.817 kb on + strand at 93.821 kb on - strand at 93.821 kb on - strand at 93.882 kb on - strand, within MPMX20_00090 at 93.919 kb on - strand, within MPMX20_00090 at 93.960 kb on - strand, within MPMX20_00090 at 93.981 kb on - strand, within MPMX20_00090 at 93.981 kb on - strand, within MPMX20_00090 at 93.983 kb on + strand, within MPMX20_00090 at 94.008 kb on + strand, within MPMX20_00090 at 94.011 kb on - strand, within MPMX20_00090 at 94.016 kb on - strand, within MPMX20_00090 at 94.041 kb on - strand, within MPMX20_00090 at 94.065 kb on - strand, within MPMX20_00090 at 94.084 kb on + strand, within MPMX20_00090 at 94.091 kb on - strand, within MPMX20_00090 at 94.097 kb on + strand, within MPMX20_00090 at 94.097 kb on + strand, within MPMX20_00090 at 94.105 kb on - strand, within MPMX20_00090 at 94.180 kb on - strand, within MPMX20_00090 at 94.191 kb on - strand, within MPMX20_00090 at 94.207 kb on + strand, within MPMX20_00090 at 94.207 kb on + strand, within MPMX20_00090 at 94.208 kb on - strand, within MPMX20_00090 at 94.208 kb on - strand, within MPMX20_00090 at 94.215 kb on - strand, within MPMX20_00090 at 94.234 kb on - strand, within MPMX20_00090 at 94.251 kb on + strand, within MPMX20_00090 at 94.276 kb on - strand, within MPMX20_00090 at 94.311 kb on + strand, within MPMX20_00090 at 94.338 kb on + strand, within MPMX20_00090 at 94.338 kb on + strand, within MPMX20_00090 at 94.346 kb on - strand, within MPMX20_00090 at 94.346 kb on - strand, within MPMX20_00090 at 94.346 kb on - strand, within MPMX20_00090 at 94.346 kb on - strand, within MPMX20_00090 at 94.381 kb on + strand at 94.381 kb on + strand at 94.458 kb on - strand at 94.681 kb on - strand at 94.754 kb on + strand at 94.762 kb on - strand at 94.762 kb on - strand at 94.767 kb on - strand at 94.898 kb on - strand, within MPMX20_00091 at 94.898 kb on - strand, within MPMX20_00091 at 95.055 kb on + strand, within MPMX20_00091 at 95.108 kb on - strand, within MPMX20_00091 at 95.142 kb on + strand, within MPMX20_00091 at 95.150 kb on - strand, within MPMX20_00091 at 95.150 kb on - strand, within MPMX20_00091 at 95.204 kb on + strand, within MPMX20_00091 at 95.212 kb on - strand, within MPMX20_00091 at 95.212 kb on - strand, within MPMX20_00091 at 95.212 kb on - strand, within MPMX20_00091 at 95.286 kb on - strand, within MPMX20_00091 at 95.373 kb on + strand, within MPMX20_00091 at 95.381 kb on - strand, within MPMX20_00091 at 95.416 kb on - strand, within MPMX20_00091 at 95.424 kb on - strand, within MPMX20_00091 at 95.470 kb on - strand at 95.470 kb on - strand at 95.470 kb on - strand at 95.477 kb on + strand at 95.502 kb on - strand at 95.574 kb on - strand at 95.587 kb on - strand at 95.597 kb on + strand at 95.696 kb on + strand at 95.714 kb on + strand at 95.722 kb on - strand at 95.722 kb on - strand at 95.748 kb on + strand, within MPMX20_00092 at 95.758 kb on + strand, within MPMX20_00092 at 95.780 kb on + strand, within MPMX20_00092 at 95.790 kb on - strand, within MPMX20_00092 at 95.828 kb on + strand, within MPMX20_00092 at 95.828 kb on + strand, within MPMX20_00092 at 95.828 kb on + strand, within MPMX20_00092 at 95.858 kb on - strand, within MPMX20_00092 at 95.879 kb on + strand, within MPMX20_00092 at 95.879 kb on + strand, within MPMX20_00092 at 95.887 kb on - strand, within MPMX20_00092 at 95.955 kb on + strand, within MPMX20_00092 at 95.955 kb on + strand, within MPMX20_00092 at 96.008 kb on + strand, within MPMX20_00092 at 96.016 kb on - strand, within MPMX20_00092 at 96.016 kb on - strand, within MPMX20_00092 at 96.016 kb on - strand, within MPMX20_00092 at 96.041 kb on + strand, within MPMX20_00092 at 96.097 kb on - strand, within MPMX20_00092 at 96.103 kb on + strand, within MPMX20_00092 at 96.118 kb on + strand, within MPMX20_00092 at 96.118 kb on + strand, within MPMX20_00092 at 96.217 kb on - strand, within MPMX20_00092 at 96.218 kb on + strand, within MPMX20_00092 at 96.227 kb on + strand, within MPMX20_00092 at 96.274 kb on + strand, within MPMX20_00092 at 96.274 kb on + strand, within MPMX20_00092 at 96.276 kb on - strand, within MPMX20_00092 at 96.287 kb on + strand, within MPMX20_00092 at 96.300 kb on + strand, within MPMX20_00092 at 96.406 kb on - strand at 96.446 kb on + strand at 96.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 93,687 + +0.5 93,712 - -2.8 93,731 - -0.4 93,813 + +2.0 93,817 + -0.1 93,821 - +0.9 93,821 - -0.1 93,882 - MPMX20_00090 0.11 +0.1 93,919 - MPMX20_00090 0.17 +0.6 93,960 - MPMX20_00090 0.24 -1.4 93,981 - MPMX20_00090 0.27 -3.4 93,981 - MPMX20_00090 0.27 -0.4 93,983 + MPMX20_00090 0.27 -1.6 94,008 + MPMX20_00090 0.31 +2.2 94,011 - MPMX20_00090 0.32 -3.1 94,016 - MPMX20_00090 0.33 -1.0 94,041 - MPMX20_00090 0.37 -0.2 94,065 - MPMX20_00090 0.41 +2.4 94,084 + MPMX20_00090 0.44 -1.6 94,091 - MPMX20_00090 0.45 +2.2 94,097 + MPMX20_00090 0.46 -0.9 94,097 + MPMX20_00090 0.46 -0.2 94,105 - MPMX20_00090 0.47 +1.8 94,180 - MPMX20_00090 0.59 -1.2 94,191 - MPMX20_00090 0.61 -1.0 94,207 + MPMX20_00090 0.64 -1.7 94,207 + MPMX20_00090 0.64 +1.3 94,208 - MPMX20_00090 0.64 +0.6 94,208 - MPMX20_00090 0.64 +0.1 94,215 - MPMX20_00090 0.65 +0.5 94,234 - MPMX20_00090 0.68 -0.3 94,251 + MPMX20_00090 0.71 -3.0 94,276 - MPMX20_00090 0.75 -3.4 94,311 + MPMX20_00090 0.80 +1.1 94,338 + MPMX20_00090 0.85 -2.8 94,338 + MPMX20_00090 0.85 -1.2 94,346 - MPMX20_00090 0.86 -2.6 94,346 - MPMX20_00090 0.86 -4.1 94,346 - MPMX20_00090 0.86 -1.1 94,346 - MPMX20_00090 0.86 +1.9 94,381 + +2.0 94,381 + -1.1 94,458 - +1.7 94,681 - -2.0 94,754 + -3.0 94,762 - +0.9 94,762 - +0.4 94,767 - -2.1 94,898 - MPMX20_00091 0.25 -1.1 94,898 - MPMX20_00091 0.25 +3.5 95,055 + MPMX20_00091 0.43 +1.5 95,108 - MPMX20_00091 0.49 +2.4 95,142 + MPMX20_00091 0.53 +0.1 95,150 - MPMX20_00091 0.54 -0.4 95,150 - MPMX20_00091 0.54 +3.0 95,204 + MPMX20_00091 0.60 +0.1 95,212 - MPMX20_00091 0.61 +1.5 95,212 - MPMX20_00091 0.61 -2.5 95,212 - MPMX20_00091 0.61 +1.3 95,286 - MPMX20_00091 0.70 +1.4 95,373 + MPMX20_00091 0.80 +2.0 95,381 - MPMX20_00091 0.81 +2.3 95,416 - MPMX20_00091 0.85 -0.4 95,424 - MPMX20_00091 0.86 -2.4 95,470 - +2.9 95,470 - -1.2 95,470 - -0.1 95,477 + +1.7 95,502 - +1.2 95,574 - -2.7 95,587 - +0.1 95,597 + -2.0 95,696 + -0.6 95,714 + +0.3 95,722 - -1.8 95,722 - -2.2 95,748 + MPMX20_00092 0.11 -1.4 95,758 + MPMX20_00092 0.12 +2.4 95,780 + MPMX20_00092 0.15 -3.6 95,790 - MPMX20_00092 0.16 +1.7 95,828 + MPMX20_00092 0.22 +1.5 95,828 + MPMX20_00092 0.22 -3.2 95,828 + MPMX20_00092 0.22 -3.1 95,858 - MPMX20_00092 0.26 -2.2 95,879 + MPMX20_00092 0.29 -3.4 95,879 + MPMX20_00092 0.29 -0.6 95,887 - MPMX20_00092 0.30 +1.8 95,955 + MPMX20_00092 0.39 -3.2 95,955 + MPMX20_00092 0.39 -2.3 96,008 + MPMX20_00092 0.47 -3.3 96,016 - MPMX20_00092 0.48 -0.4 96,016 - MPMX20_00092 0.48 -2.9 96,016 - MPMX20_00092 0.48 +0.4 96,041 + MPMX20_00092 0.51 +0.6 96,097 - MPMX20_00092 0.59 -2.6 96,103 + MPMX20_00092 0.60 -3.7 96,118 + MPMX20_00092 0.62 +1.7 96,118 + MPMX20_00092 0.62 +0.9 96,217 - MPMX20_00092 0.76 -0.6 96,218 + MPMX20_00092 0.76 +1.5 96,227 + MPMX20_00092 0.77 -0.6 96,274 + MPMX20_00092 0.84 -0.0 96,274 + MPMX20_00092 0.84 -3.6 96,276 - MPMX20_00092 0.84 +2.0 96,287 + MPMX20_00092 0.86 +1.8 96,300 + MPMX20_00092 0.88 -2.3 96,406 - -3.4 96,446 + +0.1 96,479 - -2.3
Or see this region's nucleotide sequence