Experiment: Beta-Lactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04736 and MPMX20_04737 are separated by 53 nucleotides MPMX20_04737 and MPMX20_04738 are separated by 10 nucleotides MPMX20_04738 and MPMX20_04739 overlap by 1 nucleotides
MPMX20_04736: MPMX20_04736 - hypothetical protein, at 82,343 to 83,122
_04736
MPMX20_04737: MPMX20_04737 - hypothetical protein, at 83,176 to 83,595
_04737
MPMX20_04738: MPMX20_04738 - hypothetical protein, at 83,606 to 83,827
_04738
MPMX20_04739: MPMX20_04739 - DNA adenine methyltransferase YhdJ, at 83,827 to 84,504
_04739
Position (kb) 83
84 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 82.211 kb on - strand at 82.229 kb on + strand at 82.302 kb on - strand at 82.302 kb on - strand at 82.302 kb on - strand at 82.302 kb on - strand at 82.328 kb on + strand at 82.330 kb on + strand at 82.336 kb on - strand at 82.338 kb on - strand at 82.338 kb on - strand at 82.340 kb on + strand at 82.340 kb on + strand at 82.348 kb on - strand at 82.348 kb on - strand at 82.348 kb on - strand at 82.348 kb on - strand at 82.348 kb on - strand at 82.374 kb on - strand at 82.388 kb on - strand at 82.388 kb on - strand at 82.388 kb on - strand at 82.397 kb on + strand at 82.423 kb on + strand, within MPMX20_04736 at 82.423 kb on + strand, within MPMX20_04736 at 82.424 kb on + strand, within MPMX20_04736 at 82.424 kb on + strand, within MPMX20_04736 at 82.431 kb on - strand, within MPMX20_04736 at 82.442 kb on + strand, within MPMX20_04736 at 82.454 kb on + strand, within MPMX20_04736 at 82.463 kb on + strand, within MPMX20_04736 at 82.473 kb on + strand, within MPMX20_04736 at 82.478 kb on + strand, within MPMX20_04736 at 82.481 kb on - strand, within MPMX20_04736 at 82.481 kb on - strand, within MPMX20_04736 at 82.528 kb on + strand, within MPMX20_04736 at 82.538 kb on + strand, within MPMX20_04736 at 82.538 kb on + strand, within MPMX20_04736 at 82.538 kb on + strand, within MPMX20_04736 at 82.538 kb on + strand, within MPMX20_04736 at 82.538 kb on + strand, within MPMX20_04736 at 82.538 kb on + strand, within MPMX20_04736 at 82.546 kb on - strand, within MPMX20_04736 at 82.546 kb on - strand, within MPMX20_04736 at 82.546 kb on - strand, within MPMX20_04736 at 82.559 kb on - strand, within MPMX20_04736 at 82.561 kb on + strand, within MPMX20_04736 at 82.561 kb on + strand, within MPMX20_04736 at 82.561 kb on + strand, within MPMX20_04736 at 82.564 kb on - strand, within MPMX20_04736 at 82.564 kb on - strand, within MPMX20_04736 at 82.687 kb on + strand, within MPMX20_04736 at 82.693 kb on + strand, within MPMX20_04736 at 82.711 kb on + strand, within MPMX20_04736 at 82.712 kb on + strand, within MPMX20_04736 at 82.720 kb on - strand, within MPMX20_04736 at 82.720 kb on - strand, within MPMX20_04736 at 82.720 kb on - strand, within MPMX20_04736 at 82.741 kb on - strand, within MPMX20_04736 at 82.800 kb on + strand, within MPMX20_04736 at 82.800 kb on + strand, within MPMX20_04736 at 82.800 kb on + strand, within MPMX20_04736 at 82.803 kb on - strand, within MPMX20_04736 at 82.805 kb on + strand, within MPMX20_04736 at 82.805 kb on + strand, within MPMX20_04736 at 82.808 kb on - strand, within MPMX20_04736 at 82.808 kb on - strand, within MPMX20_04736 at 82.808 kb on - strand, within MPMX20_04736 at 82.808 kb on - strand, within MPMX20_04736 at 82.813 kb on - strand, within MPMX20_04736 at 82.813 kb on - strand, within MPMX20_04736 at 82.813 kb on - strand, within MPMX20_04736 at 82.819 kb on + strand, within MPMX20_04736 at 82.819 kb on + strand, within MPMX20_04736 at 82.830 kb on + strand, within MPMX20_04736 at 82.859 kb on - strand, within MPMX20_04736 at 82.886 kb on + strand, within MPMX20_04736 at 82.916 kb on - strand, within MPMX20_04736 at 82.919 kb on - strand, within MPMX20_04736 at 82.926 kb on - strand, within MPMX20_04736 at 82.938 kb on + strand, within MPMX20_04736 at 82.946 kb on - strand, within MPMX20_04736 at 82.951 kb on - strand, within MPMX20_04736 at 82.985 kb on + strand, within MPMX20_04736 at 83.019 kb on + strand, within MPMX20_04736 at 83.027 kb on - strand, within MPMX20_04736 at 83.027 kb on - strand, within MPMX20_04736 at 83.028 kb on - strand, within MPMX20_04736 at 83.029 kb on + strand, within MPMX20_04736 at 83.037 kb on - strand, within MPMX20_04736 at 83.037 kb on - strand, within MPMX20_04736 at 83.037 kb on - strand, within MPMX20_04736 at 83.037 kb on - strand, within MPMX20_04736 at 83.044 kb on + strand, within MPMX20_04736 at 83.052 kb on - strand at 83.062 kb on - strand at 83.089 kb on + strand at 83.089 kb on + strand at 83.139 kb on - strand at 83.139 kb on - strand at 83.139 kb on - strand at 83.142 kb on + strand at 83.223 kb on + strand, within MPMX20_04737 at 83.223 kb on + strand, within MPMX20_04737 at 83.231 kb on + strand, within MPMX20_04737 at 83.231 kb on - strand, within MPMX20_04737 at 83.243 kb on + strand, within MPMX20_04737 at 83.251 kb on - strand, within MPMX20_04737 at 83.253 kb on + strand, within MPMX20_04737 at 83.264 kb on + strand, within MPMX20_04737 at 83.264 kb on + strand, within MPMX20_04737 at 83.272 kb on - strand, within MPMX20_04737 at 83.289 kb on + strand, within MPMX20_04737 at 83.317 kb on - strand, within MPMX20_04737 at 83.317 kb on - strand, within MPMX20_04737 at 83.317 kb on - strand, within MPMX20_04737 at 83.351 kb on + strand, within MPMX20_04737 at 83.351 kb on + strand, within MPMX20_04737 at 83.359 kb on - strand, within MPMX20_04737 at 83.359 kb on - strand, within MPMX20_04737 at 83.359 kb on - strand, within MPMX20_04737 at 83.402 kb on - strand, within MPMX20_04737 at 83.407 kb on + strand, within MPMX20_04737 at 83.408 kb on - strand, within MPMX20_04737 at 83.450 kb on + strand, within MPMX20_04737 at 83.450 kb on + strand, within MPMX20_04737 at 83.450 kb on + strand, within MPMX20_04737 at 83.450 kb on + strand, within MPMX20_04737 at 83.458 kb on - strand, within MPMX20_04737 at 83.475 kb on + strand, within MPMX20_04737 at 83.554 kb on - strand at 83.554 kb on - strand at 83.558 kb on + strand at 83.559 kb on - strand at 83.566 kb on - strand at 83.575 kb on - strand at 83.582 kb on - strand at 83.582 kb on - strand at 83.585 kb on + strand at 83.652 kb on + strand, within MPMX20_04738 at 83.660 kb on - strand, within MPMX20_04738 at 83.660 kb on - strand, within MPMX20_04738 at 83.690 kb on + strand, within MPMX20_04738 at 83.690 kb on + strand, within MPMX20_04738 at 83.690 kb on + strand, within MPMX20_04738 at 83.698 kb on - strand, within MPMX20_04738 at 83.698 kb on - strand, within MPMX20_04738 at 83.698 kb on - strand, within MPMX20_04738 at 83.698 kb on - strand, within MPMX20_04738 at 83.734 kb on + strand, within MPMX20_04738 at 83.734 kb on + strand, within MPMX20_04738 at 83.742 kb on - strand, within MPMX20_04738 at 83.742 kb on - strand, within MPMX20_04738 at 83.742 kb on - strand, within MPMX20_04738 at 83.744 kb on + strand, within MPMX20_04738 at 83.747 kb on - strand, within MPMX20_04738 at 83.747 kb on - strand, within MPMX20_04738 at 83.820 kb on - strand at 83.845 kb on + strand at 83.858 kb on + strand at 83.866 kb on - strand at 83.909 kb on - strand, within MPMX20_04739 at 83.928 kb on + strand, within MPMX20_04739 at 83.928 kb on + strand, within MPMX20_04739 at 83.944 kb on + strand, within MPMX20_04739 at 83.962 kb on - strand, within MPMX20_04739 at 83.974 kb on + strand, within MPMX20_04739 at 83.982 kb on - strand, within MPMX20_04739 at 84.060 kb on - strand, within MPMX20_04739 at 84.083 kb on - strand, within MPMX20_04739 at 84.154 kb on + strand, within MPMX20_04739 at 84.154 kb on + strand, within MPMX20_04739 at 84.161 kb on - strand, within MPMX20_04739 at 84.162 kb on - strand, within MPMX20_04739 at 84.162 kb on - strand, within MPMX20_04739 at 84.162 kb on - strand, within MPMX20_04739 at 84.178 kb on + strand, within MPMX20_04739 at 84.186 kb on - strand, within MPMX20_04739 at 84.275 kb on + strand, within MPMX20_04739 at 84.326 kb on + strand, within MPMX20_04739 at 84.333 kb on + strand, within MPMX20_04739 at 84.333 kb on + strand, within MPMX20_04739 at 84.334 kb on - strand, within MPMX20_04739 at 84.341 kb on - strand, within MPMX20_04739 at 84.382 kb on + strand, within MPMX20_04739 at 84.388 kb on + strand, within MPMX20_04739 at 84.396 kb on - strand, within MPMX20_04739 at 84.407 kb on - strand, within MPMX20_04739 at 84.479 kb on + strand at 84.487 kb on - strand at 84.487 kb on - strand at 84.502 kb on - strand at 84.576 kb on + strand at 84.576 kb on + strand at 84.584 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose (C) remove 82,211 - -1.2 82,229 + +0.8 82,302 - +1.5 82,302 - +1.7 82,302 - +1.8 82,302 - -0.1 82,328 + +0.8 82,330 + +3.1 82,336 - +3.1 82,338 - +1.3 82,338 - +2.1 82,340 + -0.5 82,340 + +0.2 82,348 - -0.6 82,348 - +3.4 82,348 - +0.6 82,348 - +1.3 82,348 - -0.3 82,374 - +1.0 82,388 - -1.4 82,388 - +2.1 82,388 - +0.3 82,397 + +0.8 82,423 + MPMX20_04736 0.10 +0.0 82,423 + MPMX20_04736 0.10 -0.7 82,424 + MPMX20_04736 0.10 -1.3 82,424 + MPMX20_04736 0.10 -0.2 82,431 - MPMX20_04736 0.11 +1.0 82,442 + MPMX20_04736 0.13 +1.1 82,454 + MPMX20_04736 0.14 -1.3 82,463 + MPMX20_04736 0.15 -0.2 82,473 + MPMX20_04736 0.17 +1.0 82,478 + MPMX20_04736 0.17 +0.6 82,481 - MPMX20_04736 0.18 +1.1 82,481 - MPMX20_04736 0.18 -0.8 82,528 + MPMX20_04736 0.24 -0.7 82,538 + MPMX20_04736 0.25 +0.2 82,538 + MPMX20_04736 0.25 +0.5 82,538 + MPMX20_04736 0.25 -0.0 82,538 + MPMX20_04736 0.25 +2.3 82,538 + MPMX20_04736 0.25 -0.5 82,538 + MPMX20_04736 0.25 -0.8 82,546 - MPMX20_04736 0.26 +0.3 82,546 - MPMX20_04736 0.26 -0.2 82,546 - MPMX20_04736 0.26 +0.8 82,559 - MPMX20_04736 0.28 +0.3 82,561 + MPMX20_04736 0.28 +0.5 82,561 + MPMX20_04736 0.28 +0.2 82,561 + MPMX20_04736 0.28 +0.8 82,564 - MPMX20_04736 0.28 +0.4 82,564 - MPMX20_04736 0.28 -1.2 82,687 + MPMX20_04736 0.44 -0.3 82,693 + MPMX20_04736 0.45 -0.1 82,711 + MPMX20_04736 0.47 +0.6 82,712 + MPMX20_04736 0.47 -0.5 82,720 - MPMX20_04736 0.48 +0.2 82,720 - MPMX20_04736 0.48 -0.6 82,720 - MPMX20_04736 0.48 +1.9 82,741 - MPMX20_04736 0.51 +0.5 82,800 + MPMX20_04736 0.59 -0.9 82,800 + MPMX20_04736 0.59 +1.1 82,800 + MPMX20_04736 0.59 +2.3 82,803 - MPMX20_04736 0.59 +1.1 82,805 + MPMX20_04736 0.59 -0.9 82,805 + MPMX20_04736 0.59 +1.2 82,808 - MPMX20_04736 0.60 +1.1 82,808 - MPMX20_04736 0.60 +0.0 82,808 - MPMX20_04736 0.60 +2.0 82,808 - MPMX20_04736 0.60 +1.2 82,813 - MPMX20_04736 0.60 +2.5 82,813 - MPMX20_04736 0.60 +3.1 82,813 - MPMX20_04736 0.60 -0.0 82,819 + MPMX20_04736 0.61 -0.2 82,819 + MPMX20_04736 0.61 +1.3 82,830 + MPMX20_04736 0.62 +0.0 82,859 - MPMX20_04736 0.66 -0.1 82,886 + MPMX20_04736 0.70 -0.5 82,916 - MPMX20_04736 0.73 -0.8 82,919 - MPMX20_04736 0.74 -0.3 82,926 - MPMX20_04736 0.75 +0.1 82,938 + MPMX20_04736 0.76 +0.4 82,946 - MPMX20_04736 0.77 +0.3 82,951 - MPMX20_04736 0.78 +0.9 82,985 + MPMX20_04736 0.82 -0.0 83,019 + MPMX20_04736 0.87 -0.8 83,027 - MPMX20_04736 0.88 -0.3 83,027 - MPMX20_04736 0.88 -0.6 83,028 - MPMX20_04736 0.88 +1.1 83,029 + MPMX20_04736 0.88 -0.7 83,037 - MPMX20_04736 0.89 +0.1 83,037 - MPMX20_04736 0.89 -1.3 83,037 - MPMX20_04736 0.89 -0.9 83,037 - MPMX20_04736 0.89 -0.8 83,044 + MPMX20_04736 0.90 +1.5 83,052 - -0.2 83,062 - +3.1 83,089 + +0.4 83,089 + +0.7 83,139 - +1.5 83,139 - +3.1 83,139 - +0.2 83,142 + +0.8 83,223 + MPMX20_04737 0.11 +1.0 83,223 + MPMX20_04737 0.11 +0.9 83,231 + MPMX20_04737 0.13 +0.1 83,231 - MPMX20_04737 0.13 +2.3 83,243 + MPMX20_04737 0.16 +1.1 83,251 - MPMX20_04737 0.18 +1.5 83,253 + MPMX20_04737 0.18 +1.5 83,264 + MPMX20_04737 0.21 +0.6 83,264 + MPMX20_04737 0.21 +1.7 83,272 - MPMX20_04737 0.23 +2.1 83,289 + MPMX20_04737 0.27 +1.9 83,317 - MPMX20_04737 0.34 +1.7 83,317 - MPMX20_04737 0.34 +2.0 83,317 - MPMX20_04737 0.34 -0.2 83,351 + MPMX20_04737 0.42 +0.9 83,351 + MPMX20_04737 0.42 +1.9 83,359 - MPMX20_04737 0.44 -0.3 83,359 - MPMX20_04737 0.44 +1.2 83,359 - MPMX20_04737 0.44 +1.4 83,402 - MPMX20_04737 0.54 +0.5 83,407 + MPMX20_04737 0.55 +0.5 83,408 - MPMX20_04737 0.55 +1.0 83,450 + MPMX20_04737 0.65 +0.3 83,450 + MPMX20_04737 0.65 -0.2 83,450 + MPMX20_04737 0.65 -2.0 83,450 + MPMX20_04737 0.65 +1.1 83,458 - MPMX20_04737 0.67 +0.0 83,475 + MPMX20_04737 0.71 -0.1 83,554 - -2.8 83,554 - +1.9 83,558 + +1.1 83,559 - +1.9 83,566 - -0.2 83,575 - +1.6 83,582 - -0.7 83,582 - +0.9 83,585 + +0.4 83,652 + MPMX20_04738 0.21 +0.0 83,660 - MPMX20_04738 0.24 +1.1 83,660 - MPMX20_04738 0.24 +0.1 83,690 + MPMX20_04738 0.38 -0.2 83,690 + MPMX20_04738 0.38 +0.6 83,690 + MPMX20_04738 0.38 -1.2 83,698 - MPMX20_04738 0.41 +0.1 83,698 - MPMX20_04738 0.41 +0.9 83,698 - MPMX20_04738 0.41 +1.1 83,698 - MPMX20_04738 0.41 +2.7 83,734 + MPMX20_04738 0.58 -0.2 83,734 + MPMX20_04738 0.58 +1.5 83,742 - MPMX20_04738 0.61 -1.0 83,742 - MPMX20_04738 0.61 +1.2 83,742 - MPMX20_04738 0.61 -0.6 83,744 + MPMX20_04738 0.62 +0.4 83,747 - MPMX20_04738 0.64 -1.5 83,747 - MPMX20_04738 0.64 -0.2 83,820 - +0.5 83,845 + +0.2 83,858 + +0.1 83,866 - -0.2 83,909 - MPMX20_04739 0.12 -1.2 83,928 + MPMX20_04739 0.15 +0.7 83,928 + MPMX20_04739 0.15 -0.7 83,944 + MPMX20_04739 0.17 -1.6 83,962 - MPMX20_04739 0.20 +0.3 83,974 + MPMX20_04739 0.22 -0.4 83,982 - MPMX20_04739 0.23 +0.1 84,060 - MPMX20_04739 0.34 +2.2 84,083 - MPMX20_04739 0.38 +0.1 84,154 + MPMX20_04739 0.48 +0.5 84,154 + MPMX20_04739 0.48 +0.7 84,161 - MPMX20_04739 0.49 +0.5 84,162 - MPMX20_04739 0.49 -0.3 84,162 - MPMX20_04739 0.49 +0.9 84,162 - MPMX20_04739 0.49 +1.5 84,178 + MPMX20_04739 0.52 -1.4 84,186 - MPMX20_04739 0.53 +1.6 84,275 + MPMX20_04739 0.66 -0.2 84,326 + MPMX20_04739 0.74 +0.1 84,333 + MPMX20_04739 0.75 +1.8 84,333 + MPMX20_04739 0.75 -1.5 84,334 - MPMX20_04739 0.75 +1.1 84,341 - MPMX20_04739 0.76 -0.2 84,382 + MPMX20_04739 0.82 +1.4 84,388 + MPMX20_04739 0.83 -0.9 84,396 - MPMX20_04739 0.84 +0.6 84,407 - MPMX20_04739 0.86 +0.7 84,479 + -0.6 84,487 - -1.0 84,487 - -0.4 84,502 - -0.3 84,576 + +0.0 84,576 + +1.1 84,584 - +1.2
Or see this region's nucleotide sequence