Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04567

Experiment: Beta-Lactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04565 and MPMX20_04566 are separated by 27 nucleotidesMPMX20_04566 and MPMX20_04567 are separated by 37 nucleotidesMPMX20_04567 and MPMX20_04568 are separated by 44 nucleotides MPMX20_04565: MPMX20_04565 - Rhamnulose-1-phosphate aldolase, at 4,777,537 to 4,778,367 _04565 MPMX20_04566: MPMX20_04566 - L-rhamnose mutarotase, at 4,778,395 to 4,778,709 _04566 MPMX20_04567: MPMX20_04567 - Melibiose permease, at 4,778,747 to 4,780,012 _04567 MPMX20_04568: MPMX20_04568 - Alpha-galactosidase, at 4,780,057 to 4,782,180 _04568 Position (kb) 4778 4779 4780 4781Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16at 4777.802 kb on + strand, within MPMX20_04565at 4777.810 kb on - strand, within MPMX20_04565at 4777.812 kb on + strand, within MPMX20_04565at 4777.837 kb on + strand, within MPMX20_04565at 4777.841 kb on + strand, within MPMX20_04565at 4777.841 kb on + strand, within MPMX20_04565at 4777.845 kb on - strand, within MPMX20_04565at 4777.876 kb on - strand, within MPMX20_04565at 4777.880 kb on + strand, within MPMX20_04565at 4777.880 kb on + strand, within MPMX20_04565at 4777.888 kb on - strand, within MPMX20_04565at 4777.888 kb on - strand, within MPMX20_04565at 4777.888 kb on - strand, within MPMX20_04565at 4777.899 kb on + strand, within MPMX20_04565at 4777.899 kb on + strand, within MPMX20_04565at 4777.899 kb on + strand, within MPMX20_04565at 4777.933 kb on - strand, within MPMX20_04565at 4777.951 kb on + strand, within MPMX20_04565at 4777.981 kb on + strand, within MPMX20_04565at 4777.989 kb on - strand, within MPMX20_04565at 4778.085 kb on + strand, within MPMX20_04565at 4778.116 kb on + strand, within MPMX20_04565at 4778.176 kb on + strand, within MPMX20_04565at 4778.176 kb on + strand, within MPMX20_04565at 4778.184 kb on - strand, within MPMX20_04565at 4778.184 kb on - strand, within MPMX20_04565at 4778.220 kb on - strand, within MPMX20_04565at 4778.245 kb on - strand, within MPMX20_04565at 4778.245 kb on - strand, within MPMX20_04565at 4778.281 kb on - strand, within MPMX20_04565at 4778.415 kb on - strandat 4778.429 kb on - strand, within MPMX20_04566at 4778.457 kb on + strand, within MPMX20_04566at 4778.464 kb on - strand, within MPMX20_04566at 4778.465 kb on - strand, within MPMX20_04566at 4778.471 kb on + strand, within MPMX20_04566at 4778.479 kb on - strand, within MPMX20_04566at 4778.504 kb on - strand, within MPMX20_04566at 4778.511 kb on + strand, within MPMX20_04566at 4778.511 kb on + strand, within MPMX20_04566at 4778.511 kb on + strand, within MPMX20_04566at 4778.519 kb on - strand, within MPMX20_04566at 4778.636 kb on - strand, within MPMX20_04566at 4778.675 kb on + strand, within MPMX20_04566at 4778.703 kb on + strandat 4778.703 kb on + strandat 4778.705 kb on + strandat 4778.711 kb on + strandat 4778.757 kb on - strandat 4778.808 kb on - strandat 4778.816 kb on - strandat 4778.860 kb on + strandat 4778.868 kb on - strandat 4779.041 kb on + strand, within MPMX20_04567at 4779.069 kb on - strand, within MPMX20_04567at 4779.154 kb on + strand, within MPMX20_04567at 4779.299 kb on + strand, within MPMX20_04567at 4779.307 kb on - strand, within MPMX20_04567at 4779.336 kb on - strand, within MPMX20_04567at 4779.352 kb on + strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.402 kb on + strand, within MPMX20_04567at 4779.402 kb on + strand, within MPMX20_04567at 4779.402 kb on + strand, within MPMX20_04567at 4779.410 kb on - strand, within MPMX20_04567at 4779.425 kb on - strand, within MPMX20_04567at 4779.515 kb on - strand, within MPMX20_04567at 4779.541 kb on + strand, within MPMX20_04567at 4779.541 kb on + strand, within MPMX20_04567at 4779.549 kb on - strand, within MPMX20_04567at 4779.593 kb on + strand, within MPMX20_04567at 4779.593 kb on + strand, within MPMX20_04567at 4779.617 kb on + strand, within MPMX20_04567at 4779.625 kb on - strand, within MPMX20_04567at 4779.746 kb on + strand, within MPMX20_04567at 4779.808 kb on + strand, within MPMX20_04567at 4779.824 kb on - strand, within MPMX20_04567at 4779.875 kb on + strand, within MPMX20_04567at 4779.876 kb on - strand, within MPMX20_04567at 4779.883 kb on - strand, within MPMX20_04567at 4779.966 kb on - strandat 4779.983 kb on + strandat 4780.048 kb on - strandat 4780.054 kb on - strandat 4780.183 kb on - strandat 4780.202 kb on + strandat 4780.217 kb on - strandat 4780.343 kb on - strand, within MPMX20_04568at 4780.352 kb on + strand, within MPMX20_04568at 4780.360 kb on - strand, within MPMX20_04568at 4780.360 kb on - strand, within MPMX20_04568at 4780.390 kb on - strand, within MPMX20_04568at 4780.404 kb on - strand, within MPMX20_04568at 4780.404 kb on - strand, within MPMX20_04568at 4780.406 kb on - strand, within MPMX20_04568at 4780.440 kb on + strand, within MPMX20_04568at 4780.453 kb on - strand, within MPMX20_04568at 4780.453 kb on - strand, within MPMX20_04568at 4780.468 kb on + strand, within MPMX20_04568at 4780.470 kb on + strand, within MPMX20_04568at 4780.499 kb on - strand, within MPMX20_04568at 4780.502 kb on + strand, within MPMX20_04568at 4780.640 kb on + strand, within MPMX20_04568at 4780.693 kb on + strand, within MPMX20_04568at 4780.693 kb on + strand, within MPMX20_04568at 4780.693 kb on + strand, within MPMX20_04568at 4780.701 kb on - strand, within MPMX20_04568at 4780.701 kb on - strand, within MPMX20_04568at 4780.760 kb on - strand, within MPMX20_04568at 4780.773 kb on + strand, within MPMX20_04568at 4780.816 kb on - strand, within MPMX20_04568at 4780.839 kb on + strand, within MPMX20_04568at 4780.863 kb on + strand, within MPMX20_04568at 4780.871 kb on - strand, within MPMX20_04568at 4780.975 kb on - strand, within MPMX20_04568

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Per-strain Table

Position Strand Gene LocusTag Fraction Beta-Lactose (C)
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4,777,802 + MPMX20_04565 0.32 +0.7
4,777,810 - MPMX20_04565 0.33 -1.0
4,777,812 + MPMX20_04565 0.33 +0.9
4,777,837 + MPMX20_04565 0.36 -0.3
4,777,841 + MPMX20_04565 0.37 +0.6
4,777,841 + MPMX20_04565 0.37 -0.5
4,777,845 - MPMX20_04565 0.37 -0.8
4,777,876 - MPMX20_04565 0.41 -0.8
4,777,880 + MPMX20_04565 0.41 -1.1
4,777,880 + MPMX20_04565 0.41 +0.3
4,777,888 - MPMX20_04565 0.42 +0.5
4,777,888 - MPMX20_04565 0.42 +0.5
4,777,888 - MPMX20_04565 0.42 -0.3
4,777,899 + MPMX20_04565 0.44 +0.5
4,777,899 + MPMX20_04565 0.44 +0.4
4,777,899 + MPMX20_04565 0.44 +2.5
4,777,933 - MPMX20_04565 0.48 +0.5
4,777,951 + MPMX20_04565 0.50 +1.5
4,777,981 + MPMX20_04565 0.53 -0.5
4,777,989 - MPMX20_04565 0.54 +0.7
4,778,085 + MPMX20_04565 0.66 +1.2
4,778,116 + MPMX20_04565 0.70 -0.4
4,778,176 + MPMX20_04565 0.77 +0.9
4,778,176 + MPMX20_04565 0.77 -1.4
4,778,184 - MPMX20_04565 0.78 +0.2
4,778,184 - MPMX20_04565 0.78 -1.1
4,778,220 - MPMX20_04565 0.82 +1.4
4,778,245 - MPMX20_04565 0.85 +0.0
4,778,245 - MPMX20_04565 0.85 -0.0
4,778,281 - MPMX20_04565 0.90 +2.5
4,778,415 - +0.3
4,778,429 - MPMX20_04566 0.11 +0.5
4,778,457 + MPMX20_04566 0.20 -0.7
4,778,464 - MPMX20_04566 0.22 +0.6
4,778,465 - MPMX20_04566 0.22 -1.2
4,778,471 + MPMX20_04566 0.24 -1.4
4,778,479 - MPMX20_04566 0.27 -0.8
4,778,504 - MPMX20_04566 0.35 -0.7
4,778,511 + MPMX20_04566 0.37 -2.2
4,778,511 + MPMX20_04566 0.37 -0.7
4,778,511 + MPMX20_04566 0.37 -0.6
4,778,519 - MPMX20_04566 0.39 +0.9
4,778,636 - MPMX20_04566 0.77 +2.9
4,778,675 + MPMX20_04566 0.89 +2.9
4,778,703 + +0.8
4,778,703 + -0.9
4,778,705 + -0.2
4,778,711 + +0.8
4,778,757 - +0.2
4,778,808 - -0.1
4,778,816 - +0.3
4,778,860 + -0.0
4,778,868 - -2.3
4,779,041 + MPMX20_04567 0.23 -1.4
4,779,069 - MPMX20_04567 0.25 -0.1
4,779,154 + MPMX20_04567 0.32 -0.7
4,779,299 + MPMX20_04567 0.44 +0.2
4,779,307 - MPMX20_04567 0.44 +0.0
4,779,336 - MPMX20_04567 0.47 -0.1
4,779,352 + MPMX20_04567 0.48 -0.1
4,779,361 - MPMX20_04567 0.48 -1.2
4,779,361 - MPMX20_04567 0.48 -0.3
4,779,361 - MPMX20_04567 0.48 -1.9
4,779,361 - MPMX20_04567 0.48 -1.2
4,779,402 + MPMX20_04567 0.52 +0.3
4,779,402 + MPMX20_04567 0.52 -0.5
4,779,402 + MPMX20_04567 0.52 -1.5
4,779,410 - MPMX20_04567 0.52 -0.8
4,779,425 - MPMX20_04567 0.54 -1.6
4,779,515 - MPMX20_04567 0.61 +0.5
4,779,541 + MPMX20_04567 0.63 -1.6
4,779,541 + MPMX20_04567 0.63 +0.9
4,779,549 - MPMX20_04567 0.63 +0.6
4,779,593 + MPMX20_04567 0.67 -0.5
4,779,593 + MPMX20_04567 0.67 -1.1
4,779,617 + MPMX20_04567 0.69 -2.1
4,779,625 - MPMX20_04567 0.69 +0.5
4,779,746 + MPMX20_04567 0.79 +1.1
4,779,808 + MPMX20_04567 0.84 -1.1
4,779,824 - MPMX20_04567 0.85 -1.3
4,779,875 + MPMX20_04567 0.89 +0.0
4,779,876 - MPMX20_04567 0.89 +0.2
4,779,883 - MPMX20_04567 0.90 -2.7
4,779,966 - -2.7
4,779,983 + -2.0
4,780,048 - +11.5
4,780,054 - +12.9
4,780,183 - +15.4
4,780,202 + +1.6
4,780,217 - +15.9
4,780,343 - MPMX20_04568 0.13 +8.0
4,780,352 + MPMX20_04568 0.14 +1.5
4,780,360 - MPMX20_04568 0.14 +11.2
4,780,360 - MPMX20_04568 0.14 +10.5
4,780,390 - MPMX20_04568 0.16 +11.0
4,780,404 - MPMX20_04568 0.16 +8.5
4,780,404 - MPMX20_04568 0.16 +10.9
4,780,406 - MPMX20_04568 0.16 +9.7
4,780,440 + MPMX20_04568 0.18 +2.8
4,780,453 - MPMX20_04568 0.19 +10.8
4,780,453 - MPMX20_04568 0.19 +11.5
4,780,468 + MPMX20_04568 0.19 +1.7
4,780,470 + MPMX20_04568 0.19 +0.9
4,780,499 - MPMX20_04568 0.21 +11.8
4,780,502 + MPMX20_04568 0.21 +0.5
4,780,640 + MPMX20_04568 0.27 +1.6
4,780,693 + MPMX20_04568 0.30 -0.6
4,780,693 + MPMX20_04568 0.30 -2.4
4,780,693 + MPMX20_04568 0.30 +0.6
4,780,701 - MPMX20_04568 0.30 +4.2
4,780,701 - MPMX20_04568 0.30 +6.3
4,780,760 - MPMX20_04568 0.33 +3.6
4,780,773 + MPMX20_04568 0.34 -2.8
4,780,816 - MPMX20_04568 0.36 +4.3
4,780,839 + MPMX20_04568 0.37 -1.4
4,780,863 + MPMX20_04568 0.38 -1.5
4,780,871 - MPMX20_04568 0.38 +4.7
4,780,975 - MPMX20_04568 0.43 +3.6

Or see this region's nucleotide sequence