Experiment: Beta-Lactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04037 and MPMX20_04038 are separated by 34 nucleotides MPMX20_04038 and MPMX20_04039 are separated by 251 nucleotides
MPMX20_04037: MPMX20_04037 - Galactarate dehydratase (L-threo-forming), at 4,234,274 to 4,235,845
_04037
MPMX20_04038: MPMX20_04038 - Glucitol operon repressor, at 4,235,880 to 4,236,689
_04038
MPMX20_04039: MPMX20_04039 - D-tagatose-1,6-bisphosphate aldolase subunit KbaZ, at 4,236,941 to 4,238,236
_04039
Position (kb)
4235
4236
4237 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4234.907 kb on + strand, within MPMX20_04037 at 4234.907 kb on + strand, within MPMX20_04037 at 4234.915 kb on - strand, within MPMX20_04037 at 4234.915 kb on - strand, within MPMX20_04037 at 4234.984 kb on + strand, within MPMX20_04037 at 4234.984 kb on + strand, within MPMX20_04037 at 4234.984 kb on + strand, within MPMX20_04037 at 4234.984 kb on + strand, within MPMX20_04037 at 4234.984 kb on + strand, within MPMX20_04037 at 4234.992 kb on - strand, within MPMX20_04037 at 4234.997 kb on - strand, within MPMX20_04037 at 4235.101 kb on - strand, within MPMX20_04037 at 4235.116 kb on - strand, within MPMX20_04037 at 4235.119 kb on + strand, within MPMX20_04037 at 4235.177 kb on + strand, within MPMX20_04037 at 4235.190 kb on + strand, within MPMX20_04037 at 4235.232 kb on - strand, within MPMX20_04037 at 4235.286 kb on + strand, within MPMX20_04037 at 4235.286 kb on + strand, within MPMX20_04037 at 4235.294 kb on - strand, within MPMX20_04037 at 4235.294 kb on - strand, within MPMX20_04037 at 4235.320 kb on + strand, within MPMX20_04037 at 4235.449 kb on + strand, within MPMX20_04037 at 4235.465 kb on + strand, within MPMX20_04037 at 4235.472 kb on + strand, within MPMX20_04037 at 4235.511 kb on - strand, within MPMX20_04037 at 4235.554 kb on - strand, within MPMX20_04037 at 4235.607 kb on + strand, within MPMX20_04037 at 4235.643 kb on + strand, within MPMX20_04037 at 4235.678 kb on - strand, within MPMX20_04037 at 4235.702 kb on - strand at 4235.713 kb on - strand at 4235.730 kb on + strand at 4235.758 kb on - strand at 4235.769 kb on + strand at 4235.789 kb on + strand at 4235.821 kb on + strand at 4235.829 kb on - strand at 4235.829 kb on - strand at 4235.829 kb on - strand at 4235.829 kb on - strand at 4235.829 kb on - strand at 4235.859 kb on + strand at 4235.900 kb on + strand at 4235.900 kb on + strand at 4235.911 kb on + strand at 4235.919 kb on - strand at 4235.938 kb on + strand at 4235.999 kb on + strand, within MPMX20_04038 at 4236.236 kb on + strand, within MPMX20_04038 at 4236.236 kb on + strand, within MPMX20_04038 at 4236.244 kb on - strand, within MPMX20_04038 at 4236.244 kb on - strand, within MPMX20_04038 at 4236.244 kb on - strand, within MPMX20_04038 at 4236.244 kb on - strand, within MPMX20_04038 at 4236.244 kb on - strand, within MPMX20_04038 at 4236.309 kb on - strand, within MPMX20_04038 at 4236.325 kb on - strand, within MPMX20_04038 at 4236.325 kb on - strand, within MPMX20_04038 at 4236.373 kb on + strand, within MPMX20_04038 at 4236.381 kb on - strand, within MPMX20_04038 at 4236.411 kb on - strand, within MPMX20_04038 at 4236.416 kb on + strand, within MPMX20_04038 at 4236.441 kb on - strand, within MPMX20_04038 at 4236.452 kb on + strand, within MPMX20_04038 at 4236.452 kb on + strand, within MPMX20_04038 at 4236.508 kb on + strand, within MPMX20_04038 at 4236.591 kb on - strand, within MPMX20_04038 at 4236.601 kb on - strand, within MPMX20_04038 at 4236.637 kb on - strand at 4236.692 kb on - strand at 4236.807 kb on - strand at 4236.937 kb on - strand at 4236.994 kb on + strand at 4237.057 kb on + strand at 4237.060 kb on - strand at 4237.086 kb on + strand, within MPMX20_04039 at 4237.170 kb on + strand, within MPMX20_04039 at 4237.219 kb on - strand, within MPMX20_04039 at 4237.271 kb on + strand, within MPMX20_04039 at 4237.276 kb on + strand, within MPMX20_04039 at 4237.290 kb on + strand, within MPMX20_04039 at 4237.293 kb on - strand, within MPMX20_04039 at 4237.313 kb on + strand, within MPMX20_04039 at 4237.332 kb on + strand, within MPMX20_04039 at 4237.434 kb on + strand, within MPMX20_04039 at 4237.439 kb on + strand, within MPMX20_04039 at 4237.447 kb on - strand, within MPMX20_04039 at 4237.447 kb on - strand, within MPMX20_04039 at 4237.447 kb on - strand, within MPMX20_04039 at 4237.447 kb on - strand, within MPMX20_04039 at 4237.452 kb on - strand, within MPMX20_04039 at 4237.452 kb on - strand, within MPMX20_04039 at 4237.480 kb on - strand, within MPMX20_04039 at 4237.527 kb on - strand, within MPMX20_04039 at 4237.539 kb on + strand, within MPMX20_04039 at 4237.548 kb on - strand, within MPMX20_04039 at 4237.560 kb on - strand, within MPMX20_04039 at 4237.626 kb on - strand, within MPMX20_04039 at 4237.646 kb on - strand, within MPMX20_04039
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose (C) remove 4,234,907 + MPMX20_04037 0.40 -1.1 4,234,907 + MPMX20_04037 0.40 +1.1 4,234,915 - MPMX20_04037 0.41 -1.2 4,234,915 - MPMX20_04037 0.41 +0.5 4,234,984 + MPMX20_04037 0.45 +1.4 4,234,984 + MPMX20_04037 0.45 -0.2 4,234,984 + MPMX20_04037 0.45 -0.7 4,234,984 + MPMX20_04037 0.45 +1.0 4,234,984 + MPMX20_04037 0.45 +0.2 4,234,992 - MPMX20_04037 0.46 +3.4 4,234,997 - MPMX20_04037 0.46 -1.0 4,235,101 - MPMX20_04037 0.53 -0.4 4,235,116 - MPMX20_04037 0.54 -0.6 4,235,119 + MPMX20_04037 0.54 +0.0 4,235,177 + MPMX20_04037 0.57 -2.1 4,235,190 + MPMX20_04037 0.58 -0.7 4,235,232 - MPMX20_04037 0.61 +0.7 4,235,286 + MPMX20_04037 0.64 +0.1 4,235,286 + MPMX20_04037 0.64 -1.6 4,235,294 - MPMX20_04037 0.65 +0.4 4,235,294 - MPMX20_04037 0.65 -1.6 4,235,320 + MPMX20_04037 0.67 +0.0 4,235,449 + MPMX20_04037 0.75 -2.1 4,235,465 + MPMX20_04037 0.76 -0.9 4,235,472 + MPMX20_04037 0.76 -0.3 4,235,511 - MPMX20_04037 0.79 +0.1 4,235,554 - MPMX20_04037 0.81 +0.2 4,235,607 + MPMX20_04037 0.85 -1.8 4,235,643 + MPMX20_04037 0.87 +0.0 4,235,678 - MPMX20_04037 0.89 +0.7 4,235,702 - -1.3 4,235,713 - +0.1 4,235,730 + +0.2 4,235,758 - +0.7 4,235,769 + +0.2 4,235,789 + -1.7 4,235,821 + +0.2 4,235,829 - +0.8 4,235,829 - +2.0 4,235,829 - +1.5 4,235,829 - -0.2 4,235,829 - +0.3 4,235,859 + -1.6 4,235,900 + -0.1 4,235,900 + +0.1 4,235,911 + -0.7 4,235,919 - +0.1 4,235,938 + -0.4 4,235,999 + MPMX20_04038 0.15 -1.0 4,236,236 + MPMX20_04038 0.44 -2.1 4,236,236 + MPMX20_04038 0.44 -1.5 4,236,244 - MPMX20_04038 0.45 -2.8 4,236,244 - MPMX20_04038 0.45 -1.2 4,236,244 - MPMX20_04038 0.45 -1.9 4,236,244 - MPMX20_04038 0.45 -0.1 4,236,244 - MPMX20_04038 0.45 -3.2 4,236,309 - MPMX20_04038 0.53 -2.5 4,236,325 - MPMX20_04038 0.55 -0.9 4,236,325 - MPMX20_04038 0.55 -0.1 4,236,373 + MPMX20_04038 0.61 -1.6 4,236,381 - MPMX20_04038 0.62 -0.6 4,236,411 - MPMX20_04038 0.66 -3.0 4,236,416 + MPMX20_04038 0.66 -1.6 4,236,441 - MPMX20_04038 0.69 -1.3 4,236,452 + MPMX20_04038 0.71 +0.1 4,236,452 + MPMX20_04038 0.71 -1.1 4,236,508 + MPMX20_04038 0.78 -2.8 4,236,591 - MPMX20_04038 0.88 -1.4 4,236,601 - MPMX20_04038 0.89 -1.6 4,236,637 - -1.8 4,236,692 - -2.1 4,236,807 - +1.2 4,236,937 - -0.3 4,236,994 + +0.1 4,237,057 + -3.0 4,237,060 - -0.1 4,237,086 + MPMX20_04039 0.11 -0.6 4,237,170 + MPMX20_04039 0.18 +0.8 4,237,219 - MPMX20_04039 0.21 +2.0 4,237,271 + MPMX20_04039 0.25 -0.3 4,237,276 + MPMX20_04039 0.26 -1.1 4,237,290 + MPMX20_04039 0.27 +0.3 4,237,293 - MPMX20_04039 0.27 +0.9 4,237,313 + MPMX20_04039 0.29 +0.9 4,237,332 + MPMX20_04039 0.30 -0.6 4,237,434 + MPMX20_04039 0.38 +0.3 4,237,439 + MPMX20_04039 0.38 +0.6 4,237,447 - MPMX20_04039 0.39 +1.4 4,237,447 - MPMX20_04039 0.39 -0.7 4,237,447 - MPMX20_04039 0.39 +1.2 4,237,447 - MPMX20_04039 0.39 +0.4 4,237,452 - MPMX20_04039 0.39 +0.7 4,237,452 - MPMX20_04039 0.39 +0.2 4,237,480 - MPMX20_04039 0.42 -0.8 4,237,527 - MPMX20_04039 0.45 -0.3 4,237,539 + MPMX20_04039 0.46 +1.1 4,237,548 - MPMX20_04039 0.47 +1.5 4,237,560 - MPMX20_04039 0.48 -0.9 4,237,626 - MPMX20_04039 0.53 +0.9 4,237,646 - MPMX20_04039 0.54 -0.2
Or see this region's nucleotide sequence