Experiment: Beta-Lactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03214 and MPMX20_03215 overlap by 4 nucleotides MPMX20_03215 and MPMX20_03216 are separated by 2 nucleotides
MPMX20_03214: MPMX20_03214 - NADH-quinone oxidoreductase subunit F, at 3,385,174 to 3,386,511
_03214
MPMX20_03215: MPMX20_03215 - NADH-quinone oxidoreductase subunit E, at 3,386,508 to 3,387,008
_03215
MPMX20_03216: MPMX20_03216 - NADH-quinone oxidoreductase subunit C/D, at 3,387,011 to 3,388,813
_03216
Position (kb)
3386
3387
3388 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3385.593 kb on + strand, within MPMX20_03214 at 3385.848 kb on + strand, within MPMX20_03214 at 3385.857 kb on - strand, within MPMX20_03214 at 3385.895 kb on - strand, within MPMX20_03214 at 3385.923 kb on + strand, within MPMX20_03214 at 3385.946 kb on + strand, within MPMX20_03214 at 3385.954 kb on - strand, within MPMX20_03214 at 3385.973 kb on - strand, within MPMX20_03214 at 3385.973 kb on - strand, within MPMX20_03214 at 3385.988 kb on + strand, within MPMX20_03214 at 3385.988 kb on + strand, within MPMX20_03214 at 3385.996 kb on - strand, within MPMX20_03214 at 3386.005 kb on - strand, within MPMX20_03214 at 3386.104 kb on - strand, within MPMX20_03214 at 3386.131 kb on - strand, within MPMX20_03214 at 3386.211 kb on + strand, within MPMX20_03214 at 3386.219 kb on - strand, within MPMX20_03214 at 3386.240 kb on + strand, within MPMX20_03214 at 3386.240 kb on + strand, within MPMX20_03214 at 3386.240 kb on + strand, within MPMX20_03214 at 3386.248 kb on - strand, within MPMX20_03214 at 3386.248 kb on - strand, within MPMX20_03214 at 3386.352 kb on - strand, within MPMX20_03214 at 3386.390 kb on + strand at 3386.463 kb on + strand at 3386.463 kb on + strand at 3386.465 kb on + strand at 3386.473 kb on - strand at 3386.483 kb on - strand at 3386.533 kb on + strand at 3386.536 kb on - strand at 3386.536 kb on - strand at 3386.625 kb on - strand, within MPMX20_03215 at 3386.647 kb on - strand, within MPMX20_03215 at 3386.654 kb on + strand, within MPMX20_03215 at 3386.654 kb on + strand, within MPMX20_03215 at 3386.662 kb on - strand, within MPMX20_03215 at 3386.723 kb on - strand, within MPMX20_03215 at 3386.755 kb on - strand, within MPMX20_03215 at 3386.789 kb on + strand, within MPMX20_03215 at 3387.050 kb on - strand at 3387.119 kb on + strand at 3387.144 kb on - strand at 3387.172 kb on + strand at 3387.180 kb on - strand at 3387.283 kb on + strand, within MPMX20_03216 at 3387.291 kb on - strand, within MPMX20_03216 at 3387.330 kb on + strand, within MPMX20_03216 at 3387.365 kb on + strand, within MPMX20_03216 at 3387.365 kb on + strand, within MPMX20_03216 at 3387.367 kb on + strand, within MPMX20_03216 at 3387.367 kb on + strand, within MPMX20_03216 at 3387.367 kb on + strand, within MPMX20_03216 at 3387.375 kb on - strand, within MPMX20_03216 at 3387.375 kb on - strand, within MPMX20_03216 at 3387.375 kb on - strand, within MPMX20_03216 at 3387.375 kb on - strand, within MPMX20_03216 at 3387.480 kb on + strand, within MPMX20_03216 at 3387.532 kb on - strand, within MPMX20_03216 at 3387.538 kb on - strand, within MPMX20_03216 at 3387.540 kb on + strand, within MPMX20_03216 at 3387.540 kb on + strand, within MPMX20_03216 at 3387.546 kb on + strand, within MPMX20_03216 at 3387.548 kb on - strand, within MPMX20_03216 at 3387.548 kb on - strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.609 kb on + strand, within MPMX20_03216 at 3387.617 kb on - strand, within MPMX20_03216 at 3387.617 kb on - strand, within MPMX20_03216 at 3387.617 kb on - strand, within MPMX20_03216 at 3387.617 kb on - strand, within MPMX20_03216 at 3387.617 kb on - strand, within MPMX20_03216 at 3387.617 kb on - strand, within MPMX20_03216 at 3387.885 kb on - strand, within MPMX20_03216 at 3387.919 kb on + strand, within MPMX20_03216 at 3387.985 kb on + strand, within MPMX20_03216
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose (C) remove 3,385,593 + MPMX20_03214 0.31 -0.6 3,385,848 + MPMX20_03214 0.50 -2.1 3,385,857 - MPMX20_03214 0.51 -2.7 3,385,895 - MPMX20_03214 0.54 -2.5 3,385,923 + MPMX20_03214 0.56 -2.8 3,385,946 + MPMX20_03214 0.58 -4.1 3,385,954 - MPMX20_03214 0.58 -3.0 3,385,973 - MPMX20_03214 0.60 -2.0 3,385,973 - MPMX20_03214 0.60 -0.9 3,385,988 + MPMX20_03214 0.61 -1.8 3,385,988 + MPMX20_03214 0.61 -1.8 3,385,996 - MPMX20_03214 0.61 -2.8 3,386,005 - MPMX20_03214 0.62 -3.5 3,386,104 - MPMX20_03214 0.70 -2.5 3,386,131 - MPMX20_03214 0.72 -2.9 3,386,211 + MPMX20_03214 0.78 -3.7 3,386,219 - MPMX20_03214 0.78 -2.1 3,386,240 + MPMX20_03214 0.80 -1.5 3,386,240 + MPMX20_03214 0.80 -1.1 3,386,240 + MPMX20_03214 0.80 -0.4 3,386,248 - MPMX20_03214 0.80 -2.6 3,386,248 - MPMX20_03214 0.80 -0.9 3,386,352 - MPMX20_03214 0.88 -1.0 3,386,390 + -3.2 3,386,463 + -1.7 3,386,463 + -1.0 3,386,465 + -2.8 3,386,473 - -2.6 3,386,483 - -0.9 3,386,533 + -3.1 3,386,536 - -2.3 3,386,536 - -2.4 3,386,625 - MPMX20_03215 0.23 -2.7 3,386,647 - MPMX20_03215 0.28 -2.7 3,386,654 + MPMX20_03215 0.29 -2.2 3,386,654 + MPMX20_03215 0.29 -3.2 3,386,662 - MPMX20_03215 0.31 -1.7 3,386,723 - MPMX20_03215 0.43 -2.6 3,386,755 - MPMX20_03215 0.49 -0.9 3,386,789 + MPMX20_03215 0.56 -1.5 3,387,050 - -1.2 3,387,119 + -4.6 3,387,144 - -3.3 3,387,172 + -1.7 3,387,180 - -1.2 3,387,283 + MPMX20_03216 0.15 -2.4 3,387,291 - MPMX20_03216 0.16 -3.3 3,387,330 + MPMX20_03216 0.18 -1.1 3,387,365 + MPMX20_03216 0.20 -2.5 3,387,365 + MPMX20_03216 0.20 -1.0 3,387,367 + MPMX20_03216 0.20 -4.0 3,387,367 + MPMX20_03216 0.20 -2.4 3,387,367 + MPMX20_03216 0.20 -0.9 3,387,375 - MPMX20_03216 0.20 -1.6 3,387,375 - MPMX20_03216 0.20 -2.0 3,387,375 - MPMX20_03216 0.20 -2.4 3,387,375 - MPMX20_03216 0.20 +2.0 3,387,480 + MPMX20_03216 0.26 -2.0 3,387,532 - MPMX20_03216 0.29 -0.9 3,387,538 - MPMX20_03216 0.29 -3.0 3,387,540 + MPMX20_03216 0.29 -2.0 3,387,540 + MPMX20_03216 0.29 -2.3 3,387,546 + MPMX20_03216 0.30 -2.0 3,387,548 - MPMX20_03216 0.30 -2.4 3,387,548 - MPMX20_03216 0.30 -4.0 3,387,609 + MPMX20_03216 0.33 -2.0 3,387,609 + MPMX20_03216 0.33 -1.4 3,387,609 + MPMX20_03216 0.33 -2.5 3,387,609 + MPMX20_03216 0.33 -1.7 3,387,609 + MPMX20_03216 0.33 -3.3 3,387,609 + MPMX20_03216 0.33 -2.3 3,387,609 + MPMX20_03216 0.33 -1.7 3,387,609 + MPMX20_03216 0.33 -2.6 3,387,609 + MPMX20_03216 0.33 -4.0 3,387,609 + MPMX20_03216 0.33 -2.0 3,387,609 + MPMX20_03216 0.33 -2.3 3,387,617 - MPMX20_03216 0.34 -3.2 3,387,617 - MPMX20_03216 0.34 -2.1 3,387,617 - MPMX20_03216 0.34 -3.9 3,387,617 - MPMX20_03216 0.34 -2.8 3,387,617 - MPMX20_03216 0.34 -2.6 3,387,617 - MPMX20_03216 0.34 -0.8 3,387,885 - MPMX20_03216 0.48 -1.7 3,387,919 + MPMX20_03216 0.50 -2.0 3,387,985 + MPMX20_03216 0.54 -2.6
Or see this region's nucleotide sequence