Experiment: Beta-Lactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02561 and MPMX20_02562 are separated by 240 nucleotides MPMX20_02562 and MPMX20_02563 are separated by 243 nucleotides
MPMX20_02561: MPMX20_02561 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX, at 2,697,832 to 2,698,611
_02561
MPMX20_02562: MPMX20_02562 - hypothetical protein, at 2,698,852 to 2,699,400
_02562
MPMX20_02563: MPMX20_02563 - hypothetical protein, at 2,699,644 to 2,700,300
_02563
Position (kb)
2698
2699
2700 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2697.854 kb on + strand at 2697.898 kb on + strand at 2697.906 kb on - strand at 2697.947 kb on + strand, within MPMX20_02561 at 2697.957 kb on + strand, within MPMX20_02561 at 2697.965 kb on - strand, within MPMX20_02561 at 2697.967 kb on + strand, within MPMX20_02561 at 2697.972 kb on + strand, within MPMX20_02561 at 2697.975 kb on - strand, within MPMX20_02561 at 2697.975 kb on - strand, within MPMX20_02561 at 2698.076 kb on + strand, within MPMX20_02561 at 2698.112 kb on - strand, within MPMX20_02561 at 2698.112 kb on - strand, within MPMX20_02561 at 2698.118 kb on - strand, within MPMX20_02561 at 2698.153 kb on + strand, within MPMX20_02561 at 2698.161 kb on - strand, within MPMX20_02561 at 2698.204 kb on - strand, within MPMX20_02561 at 2698.209 kb on - strand, within MPMX20_02561 at 2698.237 kb on + strand, within MPMX20_02561 at 2698.237 kb on + strand, within MPMX20_02561 at 2698.264 kb on + strand, within MPMX20_02561 at 2698.267 kb on - strand, within MPMX20_02561 at 2698.305 kb on + strand, within MPMX20_02561 at 2698.305 kb on + strand, within MPMX20_02561 at 2698.352 kb on + strand, within MPMX20_02561 at 2698.397 kb on - strand, within MPMX20_02561 at 2698.430 kb on - strand, within MPMX20_02561 at 2698.514 kb on + strand, within MPMX20_02561 at 2698.518 kb on + strand, within MPMX20_02561 at 2698.522 kb on - strand, within MPMX20_02561 at 2698.546 kb on + strand at 2698.554 kb on - strand at 2698.554 kb on - strand at 2698.583 kb on + strand at 2698.583 kb on + strand at 2698.593 kb on + strand at 2698.593 kb on + strand at 2698.601 kb on - strand at 2698.601 kb on - strand at 2698.601 kb on - strand at 2698.642 kb on + strand at 2698.650 kb on - strand at 2698.650 kb on - strand at 2698.650 kb on - strand at 2698.660 kb on - strand at 2698.660 kb on - strand at 2698.660 kb on - strand at 2698.660 kb on - strand at 2698.660 kb on - strand at 2698.660 kb on - strand at 2698.707 kb on + strand at 2698.707 kb on + strand at 2698.715 kb on - strand at 2698.715 kb on - strand at 2698.715 kb on - strand at 2698.719 kb on + strand at 2698.726 kb on + strand at 2698.726 kb on + strand at 2698.727 kb on - strand at 2698.734 kb on - strand at 2698.734 kb on - strand at 2698.734 kb on - strand at 2698.954 kb on + strand, within MPMX20_02562 at 2698.954 kb on + strand, within MPMX20_02562 at 2698.956 kb on + strand, within MPMX20_02562 at 2698.962 kb on - strand, within MPMX20_02562 at 2698.962 kb on - strand, within MPMX20_02562 at 2698.964 kb on - strand, within MPMX20_02562 at 2698.972 kb on + strand, within MPMX20_02562 at 2698.973 kb on + strand, within MPMX20_02562 at 2698.979 kb on - strand, within MPMX20_02562 at 2698.981 kb on - strand, within MPMX20_02562 at 2698.981 kb on - strand, within MPMX20_02562 at 2699.020 kb on - strand, within MPMX20_02562 at 2699.025 kb on - strand, within MPMX20_02562 at 2699.040 kb on - strand, within MPMX20_02562 at 2699.040 kb on - strand, within MPMX20_02562 at 2699.074 kb on + strand, within MPMX20_02562 at 2699.074 kb on + strand, within MPMX20_02562 at 2699.082 kb on - strand, within MPMX20_02562 at 2699.100 kb on + strand, within MPMX20_02562 at 2699.138 kb on + strand, within MPMX20_02562 at 2699.141 kb on - strand, within MPMX20_02562 at 2699.146 kb on - strand, within MPMX20_02562 at 2699.155 kb on + strand, within MPMX20_02562 at 2699.155 kb on + strand, within MPMX20_02562 at 2699.155 kb on + strand, within MPMX20_02562 at 2699.155 kb on + strand, within MPMX20_02562 at 2699.163 kb on + strand, within MPMX20_02562 at 2699.163 kb on - strand, within MPMX20_02562 at 2699.163 kb on - strand, within MPMX20_02562 at 2699.163 kb on - strand, within MPMX20_02562 at 2699.163 kb on - strand, within MPMX20_02562 at 2699.163 kb on - strand, within MPMX20_02562 at 2699.163 kb on - strand, within MPMX20_02562 at 2699.169 kb on - strand, within MPMX20_02562 at 2699.171 kb on + strand, within MPMX20_02562 at 2699.181 kb on + strand, within MPMX20_02562 at 2699.181 kb on + strand, within MPMX20_02562 at 2699.181 kb on + strand, within MPMX20_02562 at 2699.189 kb on - strand, within MPMX20_02562 at 2699.258 kb on + strand, within MPMX20_02562 at 2699.258 kb on + strand, within MPMX20_02562 at 2699.268 kb on + strand, within MPMX20_02562 at 2699.269 kb on + strand, within MPMX20_02562 at 2699.269 kb on + strand, within MPMX20_02562 at 2699.276 kb on + strand, within MPMX20_02562 at 2699.276 kb on + strand, within MPMX20_02562 at 2699.277 kb on - strand, within MPMX20_02562 at 2699.279 kb on + strand, within MPMX20_02562 at 2699.284 kb on - strand, within MPMX20_02562 at 2699.287 kb on - strand, within MPMX20_02562 at 2699.289 kb on + strand, within MPMX20_02562 at 2699.296 kb on + strand, within MPMX20_02562 at 2699.296 kb on + strand, within MPMX20_02562 at 2699.296 kb on + strand, within MPMX20_02562 at 2699.296 kb on + strand, within MPMX20_02562 at 2699.296 kb on + strand, within MPMX20_02562 at 2699.296 kb on + strand, within MPMX20_02562 at 2699.297 kb on - strand, within MPMX20_02562 at 2699.302 kb on + strand, within MPMX20_02562 at 2699.302 kb on + strand, within MPMX20_02562 at 2699.302 kb on + strand, within MPMX20_02562 at 2699.302 kb on + strand, within MPMX20_02562 at 2699.304 kb on - strand, within MPMX20_02562 at 2699.304 kb on - strand, within MPMX20_02562 at 2699.304 kb on - strand, within MPMX20_02562 at 2699.307 kb on + strand, within MPMX20_02562 at 2699.307 kb on + strand, within MPMX20_02562 at 2699.307 kb on + strand, within MPMX20_02562 at 2699.310 kb on - strand, within MPMX20_02562 at 2699.322 kb on + strand, within MPMX20_02562 at 2699.327 kb on + strand, within MPMX20_02562 at 2699.327 kb on + strand, within MPMX20_02562 at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.366 kb on + strand at 2699.368 kb on + strand at 2699.376 kb on + strand at 2699.394 kb on + strand at 2699.411 kb on + strand at 2699.412 kb on + strand at 2699.423 kb on + strand at 2699.443 kb on + strand at 2699.449 kb on + strand at 2699.449 kb on + strand at 2699.449 kb on + strand at 2699.449 kb on + strand at 2699.456 kb on + strand at 2699.456 kb on + strand at 2699.465 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.473 kb on + strand at 2699.507 kb on + strand at 2699.507 kb on + strand at 2699.507 kb on + strand at 2699.507 kb on + strand at 2699.508 kb on + strand at 2699.518 kb on + strand at 2699.545 kb on + strand at 2699.545 kb on + strand at 2699.545 kb on + strand at 2699.550 kb on + strand at 2699.550 kb on + strand at 2699.556 kb on + strand at 2699.556 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.564 kb on + strand at 2699.571 kb on + strand at 2699.594 kb on + strand at 2699.604 kb on + strand at 2699.649 kb on - strand at 2699.650 kb on - strand at 2699.650 kb on - strand at 2699.656 kb on - strand at 2699.667 kb on - strand at 2699.681 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose (C) remove 2,697,854 + +0.8 2,697,898 + -0.8 2,697,906 - +0.2 2,697,947 + MPMX20_02561 0.15 -0.4 2,697,957 + MPMX20_02561 0.16 +0.0 2,697,965 - MPMX20_02561 0.17 +0.3 2,697,967 + MPMX20_02561 0.17 -0.6 2,697,972 + MPMX20_02561 0.18 +1.1 2,697,975 - MPMX20_02561 0.18 -2.2 2,697,975 - MPMX20_02561 0.18 +1.7 2,698,076 + MPMX20_02561 0.31 +0.0 2,698,112 - MPMX20_02561 0.36 -0.6 2,698,112 - MPMX20_02561 0.36 +1.2 2,698,118 - MPMX20_02561 0.37 +0.5 2,698,153 + MPMX20_02561 0.41 +0.3 2,698,161 - MPMX20_02561 0.42 +1.8 2,698,204 - MPMX20_02561 0.48 +1.0 2,698,209 - MPMX20_02561 0.48 +0.7 2,698,237 + MPMX20_02561 0.52 +0.2 2,698,237 + MPMX20_02561 0.52 -1.2 2,698,264 + MPMX20_02561 0.55 -0.3 2,698,267 - MPMX20_02561 0.56 -0.8 2,698,305 + MPMX20_02561 0.61 -0.4 2,698,305 + MPMX20_02561 0.61 +0.3 2,698,352 + MPMX20_02561 0.67 +0.6 2,698,397 - MPMX20_02561 0.72 -1.0 2,698,430 - MPMX20_02561 0.77 +0.4 2,698,514 + MPMX20_02561 0.87 +2.5 2,698,518 + MPMX20_02561 0.88 +0.9 2,698,522 - MPMX20_02561 0.88 -0.1 2,698,546 + +2.1 2,698,554 - +0.6 2,698,554 - -1.2 2,698,583 + +0.5 2,698,583 + -2.0 2,698,593 + -1.0 2,698,593 + +0.5 2,698,601 - -1.3 2,698,601 - +0.0 2,698,601 - +0.3 2,698,642 + -0.3 2,698,650 - -1.3 2,698,650 - +1.2 2,698,650 - -0.2 2,698,660 - -1.1 2,698,660 - -0.2 2,698,660 - -2.3 2,698,660 - +0.1 2,698,660 - -0.2 2,698,660 - -0.1 2,698,707 + +1.2 2,698,707 + +0.1 2,698,715 - -0.8 2,698,715 - -1.6 2,698,715 - +1.1 2,698,719 + -0.5 2,698,726 + -0.9 2,698,726 + +0.3 2,698,727 - -0.3 2,698,734 - -1.6 2,698,734 - +0.9 2,698,734 - -2.0 2,698,954 + MPMX20_02562 0.19 -1.6 2,698,954 + MPMX20_02562 0.19 -0.9 2,698,956 + MPMX20_02562 0.19 -0.6 2,698,962 - MPMX20_02562 0.20 -1.1 2,698,962 - MPMX20_02562 0.20 -2.2 2,698,964 - MPMX20_02562 0.20 -0.9 2,698,972 + MPMX20_02562 0.22 -3.3 2,698,973 + MPMX20_02562 0.22 +0.3 2,698,979 - MPMX20_02562 0.23 -1.5 2,698,981 - MPMX20_02562 0.23 -2.2 2,698,981 - MPMX20_02562 0.23 -0.3 2,699,020 - MPMX20_02562 0.31 -0.7 2,699,025 - MPMX20_02562 0.32 -1.2 2,699,040 - MPMX20_02562 0.34 -0.7 2,699,040 - MPMX20_02562 0.34 -2.0 2,699,074 + MPMX20_02562 0.40 -1.6 2,699,074 + MPMX20_02562 0.40 -1.1 2,699,082 - MPMX20_02562 0.42 +0.2 2,699,100 + MPMX20_02562 0.45 -1.7 2,699,138 + MPMX20_02562 0.52 -0.2 2,699,141 - MPMX20_02562 0.53 -3.7 2,699,146 - MPMX20_02562 0.54 -2.9 2,699,155 + MPMX20_02562 0.55 -0.8 2,699,155 + MPMX20_02562 0.55 -0.8 2,699,155 + MPMX20_02562 0.55 -0.4 2,699,155 + MPMX20_02562 0.55 +1.3 2,699,163 + MPMX20_02562 0.57 -2.9 2,699,163 - MPMX20_02562 0.57 -2.3 2,699,163 - MPMX20_02562 0.57 -0.4 2,699,163 - MPMX20_02562 0.57 -2.0 2,699,163 - MPMX20_02562 0.57 -1.0 2,699,163 - MPMX20_02562 0.57 +0.0 2,699,163 - MPMX20_02562 0.57 -2.1 2,699,169 - MPMX20_02562 0.58 -1.1 2,699,171 + MPMX20_02562 0.58 -2.5 2,699,181 + MPMX20_02562 0.60 -1.8 2,699,181 + MPMX20_02562 0.60 -2.3 2,699,181 + MPMX20_02562 0.60 -1.7 2,699,189 - MPMX20_02562 0.61 -0.5 2,699,258 + MPMX20_02562 0.74 -0.0 2,699,258 + MPMX20_02562 0.74 +0.9 2,699,268 + MPMX20_02562 0.76 -0.2 2,699,269 + MPMX20_02562 0.76 -0.0 2,699,269 + MPMX20_02562 0.76 -1.9 2,699,276 + MPMX20_02562 0.77 +1.2 2,699,276 + MPMX20_02562 0.77 -1.6 2,699,277 - MPMX20_02562 0.77 -1.7 2,699,279 + MPMX20_02562 0.78 -0.9 2,699,284 - MPMX20_02562 0.79 +0.0 2,699,287 - MPMX20_02562 0.79 -1.2 2,699,289 + MPMX20_02562 0.80 -1.4 2,699,296 + MPMX20_02562 0.81 -2.0 2,699,296 + MPMX20_02562 0.81 +2.5 2,699,296 + MPMX20_02562 0.81 -1.3 2,699,296 + MPMX20_02562 0.81 -2.2 2,699,296 + MPMX20_02562 0.81 -2.9 2,699,296 + MPMX20_02562 0.81 -1.5 2,699,297 - MPMX20_02562 0.81 +1.0 2,699,302 + MPMX20_02562 0.82 -0.6 2,699,302 + MPMX20_02562 0.82 -2.7 2,699,302 + MPMX20_02562 0.82 +1.0 2,699,302 + MPMX20_02562 0.82 +0.4 2,699,304 - MPMX20_02562 0.82 -2.3 2,699,304 - MPMX20_02562 0.82 +0.2 2,699,304 - MPMX20_02562 0.82 -0.7 2,699,307 + MPMX20_02562 0.83 -0.3 2,699,307 + MPMX20_02562 0.83 -1.4 2,699,307 + MPMX20_02562 0.83 -1.1 2,699,310 - MPMX20_02562 0.83 -0.5 2,699,322 + MPMX20_02562 0.86 -0.4 2,699,327 + MPMX20_02562 0.87 -0.7 2,699,327 + MPMX20_02562 0.87 -0.7 2,699,366 + +1.2 2,699,366 + -1.4 2,699,366 + -0.9 2,699,366 + +0.2 2,699,366 + +0.2 2,699,366 + -0.4 2,699,366 + +0.2 2,699,366 + +0.5 2,699,366 + -0.7 2,699,366 + +0.9 2,699,366 + -0.7 2,699,366 + -0.0 2,699,366 + -2.0 2,699,366 + +0.3 2,699,368 + -2.2 2,699,376 + +1.6 2,699,394 + -0.7 2,699,411 + -2.8 2,699,412 + +1.7 2,699,423 + +2.0 2,699,443 + -0.6 2,699,449 + +0.3 2,699,449 + +0.9 2,699,449 + -1.0 2,699,449 + +2.2 2,699,456 + -0.5 2,699,456 + +0.7 2,699,465 + +0.5 2,699,473 + -1.0 2,699,473 + +1.0 2,699,473 + +0.9 2,699,473 + +0.2 2,699,473 + +0.3 2,699,473 + +1.6 2,699,473 + -0.2 2,699,473 + -0.3 2,699,473 + +0.7 2,699,473 + -0.3 2,699,473 + +0.3 2,699,473 + -1.7 2,699,473 + +0.4 2,699,473 + +0.2 2,699,473 + -0.3 2,699,473 + -0.7 2,699,473 + +0.3 2,699,473 + +0.8 2,699,473 + +1.3 2,699,473 + -0.7 2,699,473 + -0.1 2,699,473 + -0.2 2,699,473 + +0.1 2,699,473 + -2.0 2,699,473 + +0.4 2,699,473 + -1.0 2,699,473 + -1.4 2,699,473 + +0.3 2,699,507 + -0.2 2,699,507 + -0.2 2,699,507 + +0.2 2,699,507 + +1.6 2,699,508 + -1.2 2,699,518 + -2.6 2,699,545 + -1.0 2,699,545 + +0.0 2,699,545 + +0.3 2,699,550 + +2.0 2,699,550 + -0.6 2,699,556 + -1.0 2,699,556 + -0.7 2,699,564 + -0.7 2,699,564 + -0.4 2,699,564 + -0.8 2,699,564 + +0.6 2,699,564 + -2.9 2,699,564 + +0.6 2,699,564 + -1.2 2,699,564 + -0.4 2,699,571 + +1.6 2,699,594 + -1.4 2,699,604 + +0.6 2,699,649 - -1.6 2,699,650 - +1.0 2,699,650 - -1.4 2,699,656 - -0.7 2,699,667 - +0.6 2,699,681 + +0.4
Or see this region's nucleotide sequence