Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02562

Experiment: Beta-Lactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02561 and MPMX20_02562 are separated by 240 nucleotidesMPMX20_02562 and MPMX20_02563 are separated by 243 nucleotides MPMX20_02561: MPMX20_02561 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX, at 2,697,832 to 2,698,611 _02561 MPMX20_02562: MPMX20_02562 - hypothetical protein, at 2,698,852 to 2,699,400 _02562 MPMX20_02563: MPMX20_02563 - hypothetical protein, at 2,699,644 to 2,700,300 _02563 Position (kb) 2698 2699 2700Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2697.854 kb on + strandat 2697.898 kb on + strandat 2697.906 kb on - strandat 2697.947 kb on + strand, within MPMX20_02561at 2697.957 kb on + strand, within MPMX20_02561at 2697.965 kb on - strand, within MPMX20_02561at 2697.967 kb on + strand, within MPMX20_02561at 2697.972 kb on + strand, within MPMX20_02561at 2697.975 kb on - strand, within MPMX20_02561at 2697.975 kb on - strand, within MPMX20_02561at 2698.076 kb on + strand, within MPMX20_02561at 2698.112 kb on - strand, within MPMX20_02561at 2698.112 kb on - strand, within MPMX20_02561at 2698.118 kb on - strand, within MPMX20_02561at 2698.153 kb on + strand, within MPMX20_02561at 2698.161 kb on - strand, within MPMX20_02561at 2698.204 kb on - strand, within MPMX20_02561at 2698.209 kb on - strand, within MPMX20_02561at 2698.237 kb on + strand, within MPMX20_02561at 2698.237 kb on + strand, within MPMX20_02561at 2698.264 kb on + strand, within MPMX20_02561at 2698.267 kb on - strand, within MPMX20_02561at 2698.305 kb on + strand, within MPMX20_02561at 2698.305 kb on + strand, within MPMX20_02561at 2698.352 kb on + strand, within MPMX20_02561at 2698.397 kb on - strand, within MPMX20_02561at 2698.430 kb on - strand, within MPMX20_02561at 2698.514 kb on + strand, within MPMX20_02561at 2698.518 kb on + strand, within MPMX20_02561at 2698.522 kb on - strand, within MPMX20_02561at 2698.546 kb on + strandat 2698.554 kb on - strandat 2698.554 kb on - strandat 2698.583 kb on + strandat 2698.583 kb on + strandat 2698.593 kb on + strandat 2698.593 kb on + strandat 2698.601 kb on - strandat 2698.601 kb on - strandat 2698.601 kb on - strandat 2698.642 kb on + strandat 2698.650 kb on - strandat 2698.650 kb on - strandat 2698.650 kb on - strandat 2698.660 kb on - strandat 2698.660 kb on - strandat 2698.660 kb on - strandat 2698.660 kb on - strandat 2698.660 kb on - strandat 2698.660 kb on - strandat 2698.707 kb on + strandat 2698.707 kb on + strandat 2698.715 kb on - strandat 2698.715 kb on - strandat 2698.715 kb on - strandat 2698.719 kb on + strandat 2698.726 kb on + strandat 2698.726 kb on + strandat 2698.727 kb on - strandat 2698.734 kb on - strandat 2698.734 kb on - strandat 2698.734 kb on - strandat 2698.954 kb on + strand, within MPMX20_02562at 2698.954 kb on + strand, within MPMX20_02562at 2698.956 kb on + strand, within MPMX20_02562at 2698.962 kb on - strand, within MPMX20_02562at 2698.962 kb on - strand, within MPMX20_02562at 2698.964 kb on - strand, within MPMX20_02562at 2698.972 kb on + strand, within MPMX20_02562at 2698.973 kb on + strand, within MPMX20_02562at 2698.979 kb on - strand, within MPMX20_02562at 2698.981 kb on - strand, within MPMX20_02562at 2698.981 kb on - strand, within MPMX20_02562at 2699.020 kb on - strand, within MPMX20_02562at 2699.025 kb on - strand, within MPMX20_02562at 2699.040 kb on - strand, within MPMX20_02562at 2699.040 kb on - strand, within MPMX20_02562at 2699.074 kb on + strand, within MPMX20_02562at 2699.074 kb on + strand, within MPMX20_02562at 2699.082 kb on - strand, within MPMX20_02562at 2699.100 kb on + strand, within MPMX20_02562at 2699.138 kb on + strand, within MPMX20_02562at 2699.141 kb on - strand, within MPMX20_02562at 2699.146 kb on - strand, within MPMX20_02562at 2699.155 kb on + strand, within MPMX20_02562at 2699.155 kb on + strand, within MPMX20_02562at 2699.155 kb on + strand, within MPMX20_02562at 2699.155 kb on + strand, within MPMX20_02562at 2699.163 kb on + strand, within MPMX20_02562at 2699.163 kb on - strand, within MPMX20_02562at 2699.163 kb on - strand, within MPMX20_02562at 2699.163 kb on - strand, within MPMX20_02562at 2699.163 kb on - strand, within MPMX20_02562at 2699.163 kb on - strand, within MPMX20_02562at 2699.163 kb on - strand, within MPMX20_02562at 2699.169 kb on - strand, within MPMX20_02562at 2699.171 kb on + strand, within MPMX20_02562at 2699.181 kb on + strand, within MPMX20_02562at 2699.181 kb on + strand, within MPMX20_02562at 2699.181 kb on + strand, within MPMX20_02562at 2699.189 kb on - strand, within MPMX20_02562at 2699.258 kb on + strand, within MPMX20_02562at 2699.258 kb on + strand, within MPMX20_02562at 2699.268 kb on + strand, within MPMX20_02562at 2699.269 kb on + strand, within MPMX20_02562at 2699.269 kb on + strand, within MPMX20_02562at 2699.276 kb on + strand, within MPMX20_02562at 2699.276 kb on + strand, within MPMX20_02562at 2699.277 kb on - strand, within MPMX20_02562at 2699.279 kb on + strand, within MPMX20_02562at 2699.284 kb on - strand, within MPMX20_02562at 2699.287 kb on - strand, within MPMX20_02562at 2699.289 kb on + strand, within MPMX20_02562at 2699.296 kb on + strand, within MPMX20_02562at 2699.296 kb on + strand, within MPMX20_02562at 2699.296 kb on + strand, within MPMX20_02562at 2699.296 kb on + strand, within MPMX20_02562at 2699.296 kb on + strand, within MPMX20_02562at 2699.296 kb on + strand, within MPMX20_02562at 2699.297 kb on - strand, within MPMX20_02562at 2699.302 kb on + strand, within MPMX20_02562at 2699.302 kb on + strand, within MPMX20_02562at 2699.302 kb on + strand, within MPMX20_02562at 2699.302 kb on + strand, within MPMX20_02562at 2699.304 kb on - strand, within MPMX20_02562at 2699.304 kb on - strand, within MPMX20_02562at 2699.304 kb on - strand, within MPMX20_02562at 2699.307 kb on + strand, within MPMX20_02562at 2699.307 kb on + strand, within MPMX20_02562at 2699.307 kb on + strand, within MPMX20_02562at 2699.310 kb on - strand, within MPMX20_02562at 2699.322 kb on + strand, within MPMX20_02562at 2699.327 kb on + strand, within MPMX20_02562at 2699.327 kb on + strand, within MPMX20_02562at 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.366 kb on + strandat 2699.368 kb on + strandat 2699.376 kb on + strandat 2699.394 kb on + strandat 2699.411 kb on + strandat 2699.412 kb on + strandat 2699.423 kb on + strandat 2699.443 kb on + strandat 2699.449 kb on + strandat 2699.449 kb on + strandat 2699.449 kb on + strandat 2699.449 kb on + strandat 2699.456 kb on + strandat 2699.456 kb on + strandat 2699.465 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.473 kb on + strandat 2699.507 kb on + strandat 2699.507 kb on + strandat 2699.507 kb on + strandat 2699.507 kb on + strandat 2699.508 kb on + strandat 2699.518 kb on + strandat 2699.545 kb on + strandat 2699.545 kb on + strandat 2699.545 kb on + strandat 2699.550 kb on + strandat 2699.550 kb on + strandat 2699.556 kb on + strandat 2699.556 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.564 kb on + strandat 2699.571 kb on + strandat 2699.594 kb on + strandat 2699.604 kb on + strandat 2699.649 kb on - strandat 2699.650 kb on - strandat 2699.650 kb on - strandat 2699.656 kb on - strandat 2699.667 kb on - strandat 2699.681 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Beta-Lactose (C)
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2,697,854 + +0.8
2,697,898 + -0.8
2,697,906 - +0.2
2,697,947 + MPMX20_02561 0.15 -0.4
2,697,957 + MPMX20_02561 0.16 +0.0
2,697,965 - MPMX20_02561 0.17 +0.3
2,697,967 + MPMX20_02561 0.17 -0.6
2,697,972 + MPMX20_02561 0.18 +1.1
2,697,975 - MPMX20_02561 0.18 -2.2
2,697,975 - MPMX20_02561 0.18 +1.7
2,698,076 + MPMX20_02561 0.31 +0.0
2,698,112 - MPMX20_02561 0.36 -0.6
2,698,112 - MPMX20_02561 0.36 +1.2
2,698,118 - MPMX20_02561 0.37 +0.5
2,698,153 + MPMX20_02561 0.41 +0.3
2,698,161 - MPMX20_02561 0.42 +1.8
2,698,204 - MPMX20_02561 0.48 +1.0
2,698,209 - MPMX20_02561 0.48 +0.7
2,698,237 + MPMX20_02561 0.52 +0.2
2,698,237 + MPMX20_02561 0.52 -1.2
2,698,264 + MPMX20_02561 0.55 -0.3
2,698,267 - MPMX20_02561 0.56 -0.8
2,698,305 + MPMX20_02561 0.61 -0.4
2,698,305 + MPMX20_02561 0.61 +0.3
2,698,352 + MPMX20_02561 0.67 +0.6
2,698,397 - MPMX20_02561 0.72 -1.0
2,698,430 - MPMX20_02561 0.77 +0.4
2,698,514 + MPMX20_02561 0.87 +2.5
2,698,518 + MPMX20_02561 0.88 +0.9
2,698,522 - MPMX20_02561 0.88 -0.1
2,698,546 + +2.1
2,698,554 - +0.6
2,698,554 - -1.2
2,698,583 + +0.5
2,698,583 + -2.0
2,698,593 + -1.0
2,698,593 + +0.5
2,698,601 - -1.3
2,698,601 - +0.0
2,698,601 - +0.3
2,698,642 + -0.3
2,698,650 - -1.3
2,698,650 - +1.2
2,698,650 - -0.2
2,698,660 - -1.1
2,698,660 - -0.2
2,698,660 - -2.3
2,698,660 - +0.1
2,698,660 - -0.2
2,698,660 - -0.1
2,698,707 + +1.2
2,698,707 + +0.1
2,698,715 - -0.8
2,698,715 - -1.6
2,698,715 - +1.1
2,698,719 + -0.5
2,698,726 + -0.9
2,698,726 + +0.3
2,698,727 - -0.3
2,698,734 - -1.6
2,698,734 - +0.9
2,698,734 - -2.0
2,698,954 + MPMX20_02562 0.19 -1.6
2,698,954 + MPMX20_02562 0.19 -0.9
2,698,956 + MPMX20_02562 0.19 -0.6
2,698,962 - MPMX20_02562 0.20 -1.1
2,698,962 - MPMX20_02562 0.20 -2.2
2,698,964 - MPMX20_02562 0.20 -0.9
2,698,972 + MPMX20_02562 0.22 -3.3
2,698,973 + MPMX20_02562 0.22 +0.3
2,698,979 - MPMX20_02562 0.23 -1.5
2,698,981 - MPMX20_02562 0.23 -2.2
2,698,981 - MPMX20_02562 0.23 -0.3
2,699,020 - MPMX20_02562 0.31 -0.7
2,699,025 - MPMX20_02562 0.32 -1.2
2,699,040 - MPMX20_02562 0.34 -0.7
2,699,040 - MPMX20_02562 0.34 -2.0
2,699,074 + MPMX20_02562 0.40 -1.6
2,699,074 + MPMX20_02562 0.40 -1.1
2,699,082 - MPMX20_02562 0.42 +0.2
2,699,100 + MPMX20_02562 0.45 -1.7
2,699,138 + MPMX20_02562 0.52 -0.2
2,699,141 - MPMX20_02562 0.53 -3.7
2,699,146 - MPMX20_02562 0.54 -2.9
2,699,155 + MPMX20_02562 0.55 -0.8
2,699,155 + MPMX20_02562 0.55 -0.8
2,699,155 + MPMX20_02562 0.55 -0.4
2,699,155 + MPMX20_02562 0.55 +1.3
2,699,163 + MPMX20_02562 0.57 -2.9
2,699,163 - MPMX20_02562 0.57 -2.3
2,699,163 - MPMX20_02562 0.57 -0.4
2,699,163 - MPMX20_02562 0.57 -2.0
2,699,163 - MPMX20_02562 0.57 -1.0
2,699,163 - MPMX20_02562 0.57 +0.0
2,699,163 - MPMX20_02562 0.57 -2.1
2,699,169 - MPMX20_02562 0.58 -1.1
2,699,171 + MPMX20_02562 0.58 -2.5
2,699,181 + MPMX20_02562 0.60 -1.8
2,699,181 + MPMX20_02562 0.60 -2.3
2,699,181 + MPMX20_02562 0.60 -1.7
2,699,189 - MPMX20_02562 0.61 -0.5
2,699,258 + MPMX20_02562 0.74 -0.0
2,699,258 + MPMX20_02562 0.74 +0.9
2,699,268 + MPMX20_02562 0.76 -0.2
2,699,269 + MPMX20_02562 0.76 -0.0
2,699,269 + MPMX20_02562 0.76 -1.9
2,699,276 + MPMX20_02562 0.77 +1.2
2,699,276 + MPMX20_02562 0.77 -1.6
2,699,277 - MPMX20_02562 0.77 -1.7
2,699,279 + MPMX20_02562 0.78 -0.9
2,699,284 - MPMX20_02562 0.79 +0.0
2,699,287 - MPMX20_02562 0.79 -1.2
2,699,289 + MPMX20_02562 0.80 -1.4
2,699,296 + MPMX20_02562 0.81 -2.0
2,699,296 + MPMX20_02562 0.81 +2.5
2,699,296 + MPMX20_02562 0.81 -1.3
2,699,296 + MPMX20_02562 0.81 -2.2
2,699,296 + MPMX20_02562 0.81 -2.9
2,699,296 + MPMX20_02562 0.81 -1.5
2,699,297 - MPMX20_02562 0.81 +1.0
2,699,302 + MPMX20_02562 0.82 -0.6
2,699,302 + MPMX20_02562 0.82 -2.7
2,699,302 + MPMX20_02562 0.82 +1.0
2,699,302 + MPMX20_02562 0.82 +0.4
2,699,304 - MPMX20_02562 0.82 -2.3
2,699,304 - MPMX20_02562 0.82 +0.2
2,699,304 - MPMX20_02562 0.82 -0.7
2,699,307 + MPMX20_02562 0.83 -0.3
2,699,307 + MPMX20_02562 0.83 -1.4
2,699,307 + MPMX20_02562 0.83 -1.1
2,699,310 - MPMX20_02562 0.83 -0.5
2,699,322 + MPMX20_02562 0.86 -0.4
2,699,327 + MPMX20_02562 0.87 -0.7
2,699,327 + MPMX20_02562 0.87 -0.7
2,699,366 + +1.2
2,699,366 + -1.4
2,699,366 + -0.9
2,699,366 + +0.2
2,699,366 + +0.2
2,699,366 + -0.4
2,699,366 + +0.2
2,699,366 + +0.5
2,699,366 + -0.7
2,699,366 + +0.9
2,699,366 + -0.7
2,699,366 + -0.0
2,699,366 + -2.0
2,699,366 + +0.3
2,699,368 + -2.2
2,699,376 + +1.6
2,699,394 + -0.7
2,699,411 + -2.8
2,699,412 + +1.7
2,699,423 + +2.0
2,699,443 + -0.6
2,699,449 + +0.3
2,699,449 + +0.9
2,699,449 + -1.0
2,699,449 + +2.2
2,699,456 + -0.5
2,699,456 + +0.7
2,699,465 + +0.5
2,699,473 + -1.0
2,699,473 + +1.0
2,699,473 + +0.9
2,699,473 + +0.2
2,699,473 + +0.3
2,699,473 + +1.6
2,699,473 + -0.2
2,699,473 + -0.3
2,699,473 + +0.7
2,699,473 + -0.3
2,699,473 + +0.3
2,699,473 + -1.7
2,699,473 + +0.4
2,699,473 + +0.2
2,699,473 + -0.3
2,699,473 + -0.7
2,699,473 + +0.3
2,699,473 + +0.8
2,699,473 + +1.3
2,699,473 + -0.7
2,699,473 + -0.1
2,699,473 + -0.2
2,699,473 + +0.1
2,699,473 + -2.0
2,699,473 + +0.4
2,699,473 + -1.0
2,699,473 + -1.4
2,699,473 + +0.3
2,699,507 + -0.2
2,699,507 + -0.2
2,699,507 + +0.2
2,699,507 + +1.6
2,699,508 + -1.2
2,699,518 + -2.6
2,699,545 + -1.0
2,699,545 + +0.0
2,699,545 + +0.3
2,699,550 + +2.0
2,699,550 + -0.6
2,699,556 + -1.0
2,699,556 + -0.7
2,699,564 + -0.7
2,699,564 + -0.4
2,699,564 + -0.8
2,699,564 + +0.6
2,699,564 + -2.9
2,699,564 + +0.6
2,699,564 + -1.2
2,699,564 + -0.4
2,699,571 + +1.6
2,699,594 + -1.4
2,699,604 + +0.6
2,699,649 - -1.6
2,699,650 - +1.0
2,699,650 - -1.4
2,699,656 - -0.7
2,699,667 - +0.6
2,699,681 + +0.4

Or see this region's nucleotide sequence