Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04530 and MPMX20_04531 are separated by 2 nucleotides MPMX20_04531 and MPMX20_04532 are separated by 276 nucleotides MPMX20_04532 and MPMX20_04533 are separated by 48 nucleotides
MPMX20_04530: MPMX20_04530 - Bifunctional aspartokinase/homoserine dehydrogenase 2, at 4,741,853 to 4,744,285
_04530
MPMX20_04531: MPMX20_04531 - Cystathionine gamma-synthase, at 4,744,288 to 4,745,448
_04531
MPMX20_04532: MPMX20_04532 - Met repressor, at 4,745,725 to 4,746,042
_04532
MPMX20_04533: MPMX20_04533 - 50S ribosomal protein L31, at 4,746,091 to 4,746,303
_04533
Position (kb)
4744
4745
4746 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3
4 at 4743.331 kb on + strand, within MPMX20_04530 at 4743.390 kb on - strand, within MPMX20_04530 at 4743.395 kb on - strand, within MPMX20_04530 at 4743.405 kb on - strand, within MPMX20_04530 at 4743.423 kb on + strand, within MPMX20_04530 at 4743.431 kb on - strand, within MPMX20_04530 at 4743.568 kb on + strand, within MPMX20_04530 at 4743.573 kb on + strand, within MPMX20_04530 at 4743.573 kb on + strand, within MPMX20_04530 at 4743.576 kb on - strand, within MPMX20_04530 at 4743.576 kb on - strand, within MPMX20_04530 at 4743.576 kb on - strand, within MPMX20_04530 at 4743.576 kb on - strand, within MPMX20_04530 at 4743.635 kb on + strand, within MPMX20_04530 at 4743.645 kb on + strand, within MPMX20_04530 at 4743.653 kb on - strand, within MPMX20_04530 at 4743.653 kb on - strand, within MPMX20_04530 at 4743.660 kb on - strand, within MPMX20_04530 at 4743.666 kb on + strand, within MPMX20_04530 at 4743.674 kb on - strand, within MPMX20_04530 at 4743.718 kb on + strand, within MPMX20_04530 at 4743.726 kb on - strand, within MPMX20_04530 at 4743.726 kb on - strand, within MPMX20_04530 at 4743.770 kb on + strand, within MPMX20_04530 at 4743.773 kb on - strand, within MPMX20_04530 at 4743.784 kb on - strand, within MPMX20_04530 at 4743.829 kb on + strand, within MPMX20_04530 at 4743.837 kb on - strand, within MPMX20_04530 at 4743.841 kb on - strand, within MPMX20_04530 at 4743.896 kb on - strand, within MPMX20_04530 at 4743.901 kb on - strand, within MPMX20_04530 at 4743.917 kb on + strand, within MPMX20_04530 at 4743.917 kb on + strand, within MPMX20_04530 at 4743.917 kb on + strand, within MPMX20_04530 at 4743.917 kb on + strand, within MPMX20_04530 at 4743.917 kb on + strand, within MPMX20_04530 at 4743.921 kb on - strand, within MPMX20_04530 at 4743.925 kb on - strand, within MPMX20_04530 at 4744.058 kb on + strand at 4744.058 kb on + strand at 4744.058 kb on - strand at 4744.099 kb on + strand at 4744.107 kb on - strand at 4744.120 kb on + strand at 4744.157 kb on - strand at 4744.179 kb on + strand at 4744.187 kb on - strand at 4744.187 kb on - strand at 4744.208 kb on + strand at 4744.216 kb on - strand at 4744.254 kb on - strand at 4744.273 kb on - strand at 4744.285 kb on + strand at 4744.293 kb on - strand at 4744.293 kb on - strand at 4744.299 kb on - strand at 4744.355 kb on - strand at 4744.419 kb on - strand, within MPMX20_04531 at 4744.420 kb on + strand, within MPMX20_04531 at 4744.426 kb on + strand, within MPMX20_04531 at 4744.454 kb on - strand, within MPMX20_04531 at 4744.495 kb on - strand, within MPMX20_04531 at 4744.499 kb on - strand, within MPMX20_04531 at 4744.518 kb on + strand, within MPMX20_04531 at 4744.673 kb on + strand, within MPMX20_04531 at 4744.681 kb on - strand, within MPMX20_04531 at 4744.681 kb on - strand, within MPMX20_04531 at 4744.683 kb on + strand, within MPMX20_04531 at 4744.735 kb on + strand, within MPMX20_04531 at 4744.765 kb on - strand, within MPMX20_04531 at 4744.775 kb on + strand, within MPMX20_04531 at 4744.824 kb on - strand, within MPMX20_04531 at 4744.890 kb on + strand, within MPMX20_04531 at 4744.898 kb on - strand, within MPMX20_04531 at 4744.903 kb on + strand, within MPMX20_04531 at 4744.925 kb on + strand, within MPMX20_04531 at 4744.925 kb on + strand, within MPMX20_04531 at 4744.932 kb on + strand, within MPMX20_04531 at 4744.932 kb on + strand, within MPMX20_04531 at 4744.932 kb on - strand, within MPMX20_04531 at 4744.940 kb on - strand, within MPMX20_04531 at 4745.015 kb on + strand, within MPMX20_04531 at 4745.144 kb on + strand, within MPMX20_04531 at 4745.158 kb on - strand, within MPMX20_04531 at 4745.219 kb on + strand, within MPMX20_04531 at 4745.238 kb on - strand, within MPMX20_04531 at 4745.317 kb on - strand, within MPMX20_04531 at 4745.319 kb on - strand, within MPMX20_04531 at 4745.392 kb on - strand at 4745.394 kb on - strand at 4745.421 kb on + strand at 4745.436 kb on + strand at 4745.449 kb on + strand at 4745.457 kb on - strand at 4745.471 kb on - strand at 4745.633 kb on - strand at 4745.637 kb on + strand at 4745.667 kb on - strand at 4745.710 kb on + strand at 4745.710 kb on + strand at 4745.820 kb on - strand, within MPMX20_04532 at 4745.893 kb on + strand, within MPMX20_04532 at 4745.953 kb on - strand, within MPMX20_04532 at 4745.953 kb on - strand, within MPMX20_04532 at 4746.002 kb on - strand, within MPMX20_04532 at 4746.117 kb on - strand, within MPMX20_04533
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 4,743,331 + MPMX20_04530 0.61 -3.2 4,743,390 - MPMX20_04530 0.63 -2.7 4,743,395 - MPMX20_04530 0.63 -2.2 4,743,405 - MPMX20_04530 0.64 -3.7 4,743,423 + MPMX20_04530 0.65 -2.7 4,743,431 - MPMX20_04530 0.65 -2.8 4,743,568 + MPMX20_04530 0.70 -5.0 4,743,573 + MPMX20_04530 0.71 -1.5 4,743,573 + MPMX20_04530 0.71 -0.1 4,743,576 - MPMX20_04530 0.71 -2.2 4,743,576 - MPMX20_04530 0.71 -4.3 4,743,576 - MPMX20_04530 0.71 -3.5 4,743,576 - MPMX20_04530 0.71 -3.1 4,743,635 + MPMX20_04530 0.73 -3.4 4,743,645 + MPMX20_04530 0.74 -2.8 4,743,653 - MPMX20_04530 0.74 -4.0 4,743,653 - MPMX20_04530 0.74 -0.4 4,743,660 - MPMX20_04530 0.74 -5.4 4,743,666 + MPMX20_04530 0.75 -3.8 4,743,674 - MPMX20_04530 0.75 -0.1 4,743,718 + MPMX20_04530 0.77 -4.6 4,743,726 - MPMX20_04530 0.77 -2.2 4,743,726 - MPMX20_04530 0.77 +0.9 4,743,770 + MPMX20_04530 0.79 -3.1 4,743,773 - MPMX20_04530 0.79 +0.3 4,743,784 - MPMX20_04530 0.79 -0.1 4,743,829 + MPMX20_04530 0.81 -3.7 4,743,837 - MPMX20_04530 0.82 -2.8 4,743,841 - MPMX20_04530 0.82 -3.9 4,743,896 - MPMX20_04530 0.84 -3.5 4,743,901 - MPMX20_04530 0.84 -2.5 4,743,917 + MPMX20_04530 0.85 -3.9 4,743,917 + MPMX20_04530 0.85 -2.7 4,743,917 + MPMX20_04530 0.85 -4.3 4,743,917 + MPMX20_04530 0.85 -3.4 4,743,917 + MPMX20_04530 0.85 -2.7 4,743,921 - MPMX20_04530 0.85 -3.4 4,743,925 - MPMX20_04530 0.85 -0.4 4,744,058 + -4.5 4,744,058 + -3.4 4,744,058 - -3.4 4,744,099 + -4.3 4,744,107 - -1.5 4,744,120 + -0.1 4,744,157 - -0.7 4,744,179 + -0.1 4,744,187 - -3.7 4,744,187 - -2.5 4,744,208 + -1.8 4,744,216 - -3.4 4,744,254 - -1.2 4,744,273 - -4.0 4,744,285 + -1.5 4,744,293 - +2.5 4,744,293 - +3.9 4,744,299 - -3.5 4,744,355 - -0.9 4,744,419 - MPMX20_04531 0.11 -4.9 4,744,420 + MPMX20_04531 0.11 -4.5 4,744,426 + MPMX20_04531 0.12 -1.1 4,744,454 - MPMX20_04531 0.14 -2.1 4,744,495 - MPMX20_04531 0.18 -5.2 4,744,499 - MPMX20_04531 0.18 -3.9 4,744,518 + MPMX20_04531 0.20 -0.4 4,744,673 + MPMX20_04531 0.33 -2.8 4,744,681 - MPMX20_04531 0.34 +0.3 4,744,681 - MPMX20_04531 0.34 -1.9 4,744,683 + MPMX20_04531 0.34 -4.6 4,744,735 + MPMX20_04531 0.39 -4.5 4,744,765 - MPMX20_04531 0.41 -3.7 4,744,775 + MPMX20_04531 0.42 -1.4 4,744,824 - MPMX20_04531 0.46 -3.7 4,744,890 + MPMX20_04531 0.52 -4.3 4,744,898 - MPMX20_04531 0.53 -3.2 4,744,903 + MPMX20_04531 0.53 -2.5 4,744,925 + MPMX20_04531 0.55 -3.0 4,744,925 + MPMX20_04531 0.55 -2.1 4,744,932 + MPMX20_04531 0.55 -2.8 4,744,932 + MPMX20_04531 0.55 -5.8 4,744,932 - MPMX20_04531 0.55 -3.7 4,744,940 - MPMX20_04531 0.56 -2.3 4,745,015 + MPMX20_04531 0.63 -3.6 4,745,144 + MPMX20_04531 0.74 -2.2 4,745,158 - MPMX20_04531 0.75 -3.2 4,745,219 + MPMX20_04531 0.80 -3.8 4,745,238 - MPMX20_04531 0.82 -1.9 4,745,317 - MPMX20_04531 0.89 -4.3 4,745,319 - MPMX20_04531 0.89 -0.4 4,745,392 - -1.7 4,745,394 - -1.3 4,745,421 + -4.4 4,745,436 + -4.2 4,745,449 + -1.9 4,745,457 - -3.5 4,745,471 - -0.3 4,745,633 - -1.4 4,745,637 + -0.5 4,745,667 - +0.4 4,745,710 + -1.2 4,745,710 + +0.4 4,745,820 - MPMX20_04532 0.30 +0.1 4,745,893 + MPMX20_04532 0.53 -3.3 4,745,953 - MPMX20_04532 0.72 -1.5 4,745,953 - MPMX20_04532 0.72 -1.7 4,746,002 - MPMX20_04532 0.87 -2.0 4,746,117 - MPMX20_04533 0.12 -1.0
Or see this region's nucleotide sequence