Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04529

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04528 and MPMX20_04529 are separated by 209 nucleotidesMPMX20_04529 and MPMX20_04530 are separated by 226 nucleotides MPMX20_04528: MPMX20_04528 - Catalase-peroxidase, at 4,738,346 to 4,740,526 _04528 MPMX20_04529: MPMX20_04529 - 5,10-methylenetetrahydrofolate reductase, at 4,740,736 to 4,741,626 _04529 MPMX20_04530: MPMX20_04530 - Bifunctional aspartokinase/homoserine dehydrogenase 2, at 4,741,853 to 4,744,285 _04530 Position (kb) 4740 4741 4742Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4739.743 kb on + strand, within MPMX20_04528at 4739.766 kb on + strand, within MPMX20_04528at 4739.815 kb on + strand, within MPMX20_04528at 4739.823 kb on - strand, within MPMX20_04528at 4739.828 kb on - strand, within MPMX20_04528at 4739.836 kb on + strand, within MPMX20_04528at 4739.855 kb on - strand, within MPMX20_04528at 4739.882 kb on - strand, within MPMX20_04528at 4739.939 kb on + strand, within MPMX20_04528at 4739.942 kb on - strand, within MPMX20_04528at 4739.947 kb on - strand, within MPMX20_04528at 4740.051 kb on - strand, within MPMX20_04528at 4740.157 kb on - strand, within MPMX20_04528at 4740.181 kb on - strand, within MPMX20_04528at 4740.197 kb on - strand, within MPMX20_04528at 4740.217 kb on - strand, within MPMX20_04528at 4740.243 kb on - strand, within MPMX20_04528at 4740.268 kb on + strand, within MPMX20_04528at 4740.276 kb on - strand, within MPMX20_04528at 4740.276 kb on - strand, within MPMX20_04528at 4740.278 kb on + strand, within MPMX20_04528at 4740.288 kb on + strand, within MPMX20_04528at 4740.288 kb on + strand, within MPMX20_04528at 4740.307 kb on + strand, within MPMX20_04528at 4740.351 kb on - strandat 4740.365 kb on + strandat 4740.374 kb on + strandat 4740.402 kb on - strandat 4740.431 kb on + strandat 4740.454 kb on + strandat 4740.464 kb on + strandat 4740.464 kb on + strandat 4740.467 kb on - strandat 4740.511 kb on + strandat 4740.511 kb on + strandat 4740.519 kb on - strandat 4740.519 kb on - strandat 4740.519 kb on - strandat 4740.519 kb on - strandat 4740.519 kb on - strandat 4740.519 kb on - strandat 4740.526 kb on + strandat 4740.538 kb on + strandat 4740.538 kb on + strandat 4740.554 kb on - strandat 4740.587 kb on - strandat 4740.937 kb on + strand, within MPMX20_04529at 4741.029 kb on + strand, within MPMX20_04529at 4741.070 kb on + strand, within MPMX20_04529at 4741.088 kb on - strand, within MPMX20_04529at 4741.093 kb on + strand, within MPMX20_04529at 4741.134 kb on - strand, within MPMX20_04529at 4741.163 kb on + strand, within MPMX20_04529at 4741.164 kb on + strand, within MPMX20_04529at 4741.213 kb on - strand, within MPMX20_04529at 4741.317 kb on + strand, within MPMX20_04529at 4741.320 kb on - strand, within MPMX20_04529at 4741.360 kb on - strand, within MPMX20_04529at 4741.363 kb on + strand, within MPMX20_04529at 4741.365 kb on - strand, within MPMX20_04529at 4741.365 kb on - strand, within MPMX20_04529at 4741.408 kb on - strand, within MPMX20_04529at 4741.421 kb on + strand, within MPMX20_04529at 4741.488 kb on - strand, within MPMX20_04529at 4741.506 kb on - strand, within MPMX20_04529at 4741.595 kb on - strandat 4741.634 kb on - strandat 4741.763 kb on + strandat 4741.776 kb on - strandat 4741.809 kb on + strandat 4741.811 kb on - strandat 4741.816 kb on - strandat 4741.819 kb on + strandat 4741.827 kb on + strandat 4741.837 kb on - strandat 4742.011 kb on + strandat 4742.083 kb on - strandat 4742.083 kb on - strandat 4742.094 kb on - strandat 4742.134 kb on + strand, within MPMX20_04530at 4742.137 kb on - strand, within MPMX20_04530at 4742.305 kb on + strand, within MPMX20_04530at 4742.305 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.449 kb on + strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.457 kb on - strand, within MPMX20_04530at 4742.492 kb on - strand, within MPMX20_04530at 4742.542 kb on + strand, within MPMX20_04530at 4742.542 kb on + strand, within MPMX20_04530

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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4,739,743 + MPMX20_04528 0.64 -0.5
4,739,766 + MPMX20_04528 0.65 +0.5
4,739,815 + MPMX20_04528 0.67 +2.5
4,739,823 - MPMX20_04528 0.68 -0.9
4,739,828 - MPMX20_04528 0.68 +0.6
4,739,836 + MPMX20_04528 0.68 -0.9
4,739,855 - MPMX20_04528 0.69 -0.8
4,739,882 - MPMX20_04528 0.70 -0.8
4,739,939 + MPMX20_04528 0.73 +0.2
4,739,942 - MPMX20_04528 0.73 +1.2
4,739,947 - MPMX20_04528 0.73 -0.7
4,740,051 - MPMX20_04528 0.78 +0.0
4,740,157 - MPMX20_04528 0.83 -0.1
4,740,181 - MPMX20_04528 0.84 -0.6
4,740,197 - MPMX20_04528 0.85 -0.2
4,740,217 - MPMX20_04528 0.86 -0.7
4,740,243 - MPMX20_04528 0.87 +0.3
4,740,268 + MPMX20_04528 0.88 +0.2
4,740,276 - MPMX20_04528 0.88 -0.1
4,740,276 - MPMX20_04528 0.88 +0.1
4,740,278 + MPMX20_04528 0.89 +0.3
4,740,288 + MPMX20_04528 0.89 -2.5
4,740,288 + MPMX20_04528 0.89 +0.5
4,740,307 + MPMX20_04528 0.90 +0.3
4,740,351 - +0.5
4,740,365 + -0.8
4,740,374 + +0.4
4,740,402 - +0.4
4,740,431 + +0.1
4,740,454 + -0.1
4,740,464 + +1.3
4,740,464 + -0.2
4,740,467 - +3.3
4,740,511 + -0.3
4,740,511 + -0.7
4,740,519 - -1.7
4,740,519 - +1.0
4,740,519 - -0.0
4,740,519 - -0.8
4,740,519 - -0.2
4,740,519 - -0.7
4,740,526 + -0.4
4,740,538 + -0.1
4,740,538 + -1.6
4,740,554 - +0.5
4,740,587 - +1.1
4,740,937 + MPMX20_04529 0.23 -0.7
4,741,029 + MPMX20_04529 0.33 -0.3
4,741,070 + MPMX20_04529 0.37 -0.1
4,741,088 - MPMX20_04529 0.40 -1.1
4,741,093 + MPMX20_04529 0.40 -2.1
4,741,134 - MPMX20_04529 0.45 -2.9
4,741,163 + MPMX20_04529 0.48 -2.4
4,741,164 + MPMX20_04529 0.48 -1.9
4,741,213 - MPMX20_04529 0.54 -2.9
4,741,317 + MPMX20_04529 0.65 -0.4
4,741,320 - MPMX20_04529 0.66 -3.3
4,741,360 - MPMX20_04529 0.70 -2.1
4,741,363 + MPMX20_04529 0.70 -3.5
4,741,365 - MPMX20_04529 0.71 -0.4
4,741,365 - MPMX20_04529 0.71 -1.9
4,741,408 - MPMX20_04529 0.75 -1.1
4,741,421 + MPMX20_04529 0.77 -1.2
4,741,488 - MPMX20_04529 0.84 -0.9
4,741,506 - MPMX20_04529 0.86 -1.5
4,741,595 - -1.4
4,741,634 - -2.1
4,741,763 + -0.7
4,741,776 - -0.3
4,741,809 + +1.2
4,741,811 - +0.5
4,741,816 - -0.3
4,741,819 + +0.5
4,741,827 + -0.3
4,741,837 - +0.4
4,742,011 + -1.9
4,742,083 - -0.2
4,742,083 - -0.5
4,742,094 - -1.6
4,742,134 + MPMX20_04530 0.12 -1.7
4,742,137 - MPMX20_04530 0.12 -2.2
4,742,305 + MPMX20_04530 0.19 -3.6
4,742,305 + MPMX20_04530 0.19 -3.2
4,742,449 + MPMX20_04530 0.24 -1.5
4,742,449 + MPMX20_04530 0.24 -4.1
4,742,449 + MPMX20_04530 0.24 -3.7
4,742,449 + MPMX20_04530 0.24 -0.4
4,742,457 - MPMX20_04530 0.25 +0.3
4,742,457 - MPMX20_04530 0.25 -2.9
4,742,457 - MPMX20_04530 0.25 -1.3
4,742,457 - MPMX20_04530 0.25 +1.2
4,742,457 - MPMX20_04530 0.25 -0.1
4,742,457 - MPMX20_04530 0.25 -1.4
4,742,457 - MPMX20_04530 0.25 -1.3
4,742,492 - MPMX20_04530 0.26 -2.2
4,742,542 + MPMX20_04530 0.28 -2.8
4,742,542 + MPMX20_04530 0.28 -2.6

Or see this region's nucleotide sequence