Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04528 and MPMX20_04529 are separated by 209 nucleotides MPMX20_04529 and MPMX20_04530 are separated by 226 nucleotides
MPMX20_04528: MPMX20_04528 - Catalase-peroxidase, at 4,738,346 to 4,740,526
_04528
MPMX20_04529: MPMX20_04529 - 5,10-methylenetetrahydrofolate reductase, at 4,740,736 to 4,741,626
_04529
MPMX20_04530: MPMX20_04530 - Bifunctional aspartokinase/homoserine dehydrogenase 2, at 4,741,853 to 4,744,285
_04530
Position (kb)
4740
4741
4742 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4739.743 kb on + strand, within MPMX20_04528 at 4739.766 kb on + strand, within MPMX20_04528 at 4739.815 kb on + strand, within MPMX20_04528 at 4739.823 kb on - strand, within MPMX20_04528 at 4739.828 kb on - strand, within MPMX20_04528 at 4739.836 kb on + strand, within MPMX20_04528 at 4739.855 kb on - strand, within MPMX20_04528 at 4739.882 kb on - strand, within MPMX20_04528 at 4739.939 kb on + strand, within MPMX20_04528 at 4739.942 kb on - strand, within MPMX20_04528 at 4739.947 kb on - strand, within MPMX20_04528 at 4740.051 kb on - strand, within MPMX20_04528 at 4740.157 kb on - strand, within MPMX20_04528 at 4740.181 kb on - strand, within MPMX20_04528 at 4740.197 kb on - strand, within MPMX20_04528 at 4740.217 kb on - strand, within MPMX20_04528 at 4740.243 kb on - strand, within MPMX20_04528 at 4740.268 kb on + strand, within MPMX20_04528 at 4740.276 kb on - strand, within MPMX20_04528 at 4740.276 kb on - strand, within MPMX20_04528 at 4740.278 kb on + strand, within MPMX20_04528 at 4740.288 kb on + strand, within MPMX20_04528 at 4740.288 kb on + strand, within MPMX20_04528 at 4740.307 kb on + strand, within MPMX20_04528 at 4740.351 kb on - strand at 4740.365 kb on + strand at 4740.374 kb on + strand at 4740.402 kb on - strand at 4740.431 kb on + strand at 4740.454 kb on + strand at 4740.464 kb on + strand at 4740.464 kb on + strand at 4740.467 kb on - strand at 4740.511 kb on + strand at 4740.511 kb on + strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.526 kb on + strand at 4740.538 kb on + strand at 4740.538 kb on + strand at 4740.554 kb on - strand at 4740.587 kb on - strand at 4740.937 kb on + strand, within MPMX20_04529 at 4741.029 kb on + strand, within MPMX20_04529 at 4741.070 kb on + strand, within MPMX20_04529 at 4741.088 kb on - strand, within MPMX20_04529 at 4741.093 kb on + strand, within MPMX20_04529 at 4741.134 kb on - strand, within MPMX20_04529 at 4741.163 kb on + strand, within MPMX20_04529 at 4741.164 kb on + strand, within MPMX20_04529 at 4741.213 kb on - strand, within MPMX20_04529 at 4741.317 kb on + strand, within MPMX20_04529 at 4741.320 kb on - strand, within MPMX20_04529 at 4741.360 kb on - strand, within MPMX20_04529 at 4741.363 kb on + strand, within MPMX20_04529 at 4741.365 kb on - strand, within MPMX20_04529 at 4741.365 kb on - strand, within MPMX20_04529 at 4741.408 kb on - strand, within MPMX20_04529 at 4741.421 kb on + strand, within MPMX20_04529 at 4741.488 kb on - strand, within MPMX20_04529 at 4741.506 kb on - strand, within MPMX20_04529 at 4741.595 kb on - strand at 4741.634 kb on - strand at 4741.763 kb on + strand at 4741.776 kb on - strand at 4741.809 kb on + strand at 4741.811 kb on - strand at 4741.816 kb on - strand at 4741.819 kb on + strand at 4741.827 kb on + strand at 4741.837 kb on - strand at 4742.011 kb on + strand at 4742.083 kb on - strand at 4742.083 kb on - strand at 4742.094 kb on - strand at 4742.134 kb on + strand, within MPMX20_04530 at 4742.137 kb on - strand, within MPMX20_04530 at 4742.305 kb on + strand, within MPMX20_04530 at 4742.305 kb on + strand, within MPMX20_04530 at 4742.449 kb on + strand, within MPMX20_04530 at 4742.449 kb on + strand, within MPMX20_04530 at 4742.449 kb on + strand, within MPMX20_04530 at 4742.449 kb on + strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.457 kb on - strand, within MPMX20_04530 at 4742.492 kb on - strand, within MPMX20_04530 at 4742.542 kb on + strand, within MPMX20_04530 at 4742.542 kb on + strand, within MPMX20_04530
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 4,739,743 + MPMX20_04528 0.64 -0.5 4,739,766 + MPMX20_04528 0.65 +0.5 4,739,815 + MPMX20_04528 0.67 +2.5 4,739,823 - MPMX20_04528 0.68 -0.9 4,739,828 - MPMX20_04528 0.68 +0.6 4,739,836 + MPMX20_04528 0.68 -0.9 4,739,855 - MPMX20_04528 0.69 -0.8 4,739,882 - MPMX20_04528 0.70 -0.8 4,739,939 + MPMX20_04528 0.73 +0.2 4,739,942 - MPMX20_04528 0.73 +1.2 4,739,947 - MPMX20_04528 0.73 -0.7 4,740,051 - MPMX20_04528 0.78 +0.0 4,740,157 - MPMX20_04528 0.83 -0.1 4,740,181 - MPMX20_04528 0.84 -0.6 4,740,197 - MPMX20_04528 0.85 -0.2 4,740,217 - MPMX20_04528 0.86 -0.7 4,740,243 - MPMX20_04528 0.87 +0.3 4,740,268 + MPMX20_04528 0.88 +0.2 4,740,276 - MPMX20_04528 0.88 -0.1 4,740,276 - MPMX20_04528 0.88 +0.1 4,740,278 + MPMX20_04528 0.89 +0.3 4,740,288 + MPMX20_04528 0.89 -2.5 4,740,288 + MPMX20_04528 0.89 +0.5 4,740,307 + MPMX20_04528 0.90 +0.3 4,740,351 - +0.5 4,740,365 + -0.8 4,740,374 + +0.4 4,740,402 - +0.4 4,740,431 + +0.1 4,740,454 + -0.1 4,740,464 + +1.3 4,740,464 + -0.2 4,740,467 - +3.3 4,740,511 + -0.3 4,740,511 + -0.7 4,740,519 - -1.7 4,740,519 - +1.0 4,740,519 - -0.0 4,740,519 - -0.8 4,740,519 - -0.2 4,740,519 - -0.7 4,740,526 + -0.4 4,740,538 + -0.1 4,740,538 + -1.6 4,740,554 - +0.5 4,740,587 - +1.1 4,740,937 + MPMX20_04529 0.23 -0.7 4,741,029 + MPMX20_04529 0.33 -0.3 4,741,070 + MPMX20_04529 0.37 -0.1 4,741,088 - MPMX20_04529 0.40 -1.1 4,741,093 + MPMX20_04529 0.40 -2.1 4,741,134 - MPMX20_04529 0.45 -2.9 4,741,163 + MPMX20_04529 0.48 -2.4 4,741,164 + MPMX20_04529 0.48 -1.9 4,741,213 - MPMX20_04529 0.54 -2.9 4,741,317 + MPMX20_04529 0.65 -0.4 4,741,320 - MPMX20_04529 0.66 -3.3 4,741,360 - MPMX20_04529 0.70 -2.1 4,741,363 + MPMX20_04529 0.70 -3.5 4,741,365 - MPMX20_04529 0.71 -0.4 4,741,365 - MPMX20_04529 0.71 -1.9 4,741,408 - MPMX20_04529 0.75 -1.1 4,741,421 + MPMX20_04529 0.77 -1.2 4,741,488 - MPMX20_04529 0.84 -0.9 4,741,506 - MPMX20_04529 0.86 -1.5 4,741,595 - -1.4 4,741,634 - -2.1 4,741,763 + -0.7 4,741,776 - -0.3 4,741,809 + +1.2 4,741,811 - +0.5 4,741,816 - -0.3 4,741,819 + +0.5 4,741,827 + -0.3 4,741,837 - +0.4 4,742,011 + -1.9 4,742,083 - -0.2 4,742,083 - -0.5 4,742,094 - -1.6 4,742,134 + MPMX20_04530 0.12 -1.7 4,742,137 - MPMX20_04530 0.12 -2.2 4,742,305 + MPMX20_04530 0.19 -3.6 4,742,305 + MPMX20_04530 0.19 -3.2 4,742,449 + MPMX20_04530 0.24 -1.5 4,742,449 + MPMX20_04530 0.24 -4.1 4,742,449 + MPMX20_04530 0.24 -3.7 4,742,449 + MPMX20_04530 0.24 -0.4 4,742,457 - MPMX20_04530 0.25 +0.3 4,742,457 - MPMX20_04530 0.25 -2.9 4,742,457 - MPMX20_04530 0.25 -1.3 4,742,457 - MPMX20_04530 0.25 +1.2 4,742,457 - MPMX20_04530 0.25 -0.1 4,742,457 - MPMX20_04530 0.25 -1.4 4,742,457 - MPMX20_04530 0.25 -1.3 4,742,492 - MPMX20_04530 0.26 -2.2 4,742,542 + MPMX20_04530 0.28 -2.8 4,742,542 + MPMX20_04530 0.28 -2.6
Or see this region's nucleotide sequence