Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04524

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04523 and MPMX20_04524 are separated by 270 nucleotidesMPMX20_04524 and MPMX20_04525 are separated by 63 nucleotidesMPMX20_04525 and MPMX20_04526 are separated by 128 nucleotides MPMX20_04523: MPMX20_04523 - Acetylornithine deacetylase, at 4,731,488 to 4,732,639 _04523 MPMX20_04524: MPMX20_04524 - Phosphoenolpyruvate carboxylase, at 4,732,910 to 4,735,561 _04524 MPMX20_04525: MPMX20_04525 - HTH-type transcriptional activator RhaR, at 4,735,625 to 4,736,389 _04525 MPMX20_04526: MPMX20_04526 - Fructose-6-phosphate aldolase 2, at 4,736,518 to 4,737,180 _04526 Position (kb) 4732 4733 4734 4735 4736Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 4732.070 kb on - strand, within MPMX20_04523at 4732.075 kb on - strand, within MPMX20_04523at 4732.189 kb on + strand, within MPMX20_04523at 4732.224 kb on + strand, within MPMX20_04523at 4732.232 kb on - strand, within MPMX20_04523at 4732.251 kb on - strand, within MPMX20_04523at 4732.298 kb on - strand, within MPMX20_04523at 4732.377 kb on + strand, within MPMX20_04523at 4732.482 kb on - strand, within MPMX20_04523at 4732.504 kb on + strand, within MPMX20_04523at 4732.509 kb on + strand, within MPMX20_04523at 4732.509 kb on + strand, within MPMX20_04523at 4732.509 kb on + strand, within MPMX20_04523at 4732.509 kb on + strand, within MPMX20_04523at 4732.517 kb on - strand, within MPMX20_04523at 4732.589 kb on - strandat 4732.593 kb on + strandat 4732.612 kb on + strandat 4732.674 kb on + strandat 4732.680 kb on + strandat 4732.680 kb on + strandat 4732.680 kb on + strandat 4732.680 kb on + strandat 4732.682 kb on - strandat 4732.688 kb on - strandat 4732.688 kb on - strandat 4732.688 kb on - strandat 4732.688 kb on - strandat 4732.688 kb on - strandat 4732.688 kb on - strandat 4732.727 kb on + strandat 4732.727 kb on + strandat 4732.779 kb on - strandat 4732.835 kb on - strandat 4732.941 kb on - strandat 4732.941 kb on - strandat 4732.970 kb on - strandat 4733.077 kb on + strandat 4733.085 kb on - strandat 4733.152 kb on + strandat 4733.165 kb on + strandat 4733.168 kb on - strandat 4733.282 kb on + strand, within MPMX20_04524at 4733.312 kb on - strand, within MPMX20_04524at 4733.316 kb on - strand, within MPMX20_04524at 4733.369 kb on + strand, within MPMX20_04524at 4733.369 kb on - strand, within MPMX20_04524at 4733.379 kb on + strand, within MPMX20_04524at 4733.456 kb on + strand, within MPMX20_04524at 4733.461 kb on + strand, within MPMX20_04524at 4733.461 kb on + strand, within MPMX20_04524at 4733.461 kb on + strand, within MPMX20_04524at 4733.469 kb on - strand, within MPMX20_04524at 4733.493 kb on + strand, within MPMX20_04524at 4733.493 kb on + strand, within MPMX20_04524at 4733.512 kb on + strand, within MPMX20_04524at 4733.523 kb on + strand, within MPMX20_04524at 4733.524 kb on - strand, within MPMX20_04524at 4733.548 kb on + strand, within MPMX20_04524at 4733.548 kb on + strand, within MPMX20_04524at 4733.590 kb on + strand, within MPMX20_04524at 4733.770 kb on - strand, within MPMX20_04524at 4733.777 kb on - strand, within MPMX20_04524at 4733.785 kb on + strand, within MPMX20_04524at 4733.796 kb on + strand, within MPMX20_04524at 4733.796 kb on + strand, within MPMX20_04524at 4733.796 kb on + strand, within MPMX20_04524at 4733.796 kb on + strand, within MPMX20_04524at 4733.796 kb on + strand, within MPMX20_04524at 4733.804 kb on - strand, within MPMX20_04524at 4733.804 kb on - strand, within MPMX20_04524at 4733.804 kb on - strand, within MPMX20_04524at 4733.804 kb on - strand, within MPMX20_04524at 4733.806 kb on - strand, within MPMX20_04524at 4733.828 kb on - strand, within MPMX20_04524at 4733.864 kb on - strand, within MPMX20_04524at 4733.883 kb on - strand, within MPMX20_04524at 4733.890 kb on + strand, within MPMX20_04524at 4733.970 kb on - strand, within MPMX20_04524at 4733.983 kb on - strand, within MPMX20_04524at 4734.037 kb on + strand, within MPMX20_04524at 4734.037 kb on + strand, within MPMX20_04524at 4734.045 kb on - strand, within MPMX20_04524at 4734.229 kb on + strand, within MPMX20_04524at 4734.248 kb on - strand, within MPMX20_04524at 4734.254 kb on + strand, within MPMX20_04524at 4734.269 kb on + strand, within MPMX20_04524at 4734.277 kb on - strand, within MPMX20_04524at 4734.279 kb on + strand, within MPMX20_04524at 4734.279 kb on + strand, within MPMX20_04524at 4734.279 kb on - strand, within MPMX20_04524at 4734.403 kb on - strand, within MPMX20_04524at 4734.445 kb on - strand, within MPMX20_04524at 4734.480 kb on - strand, within MPMX20_04524at 4734.480 kb on - strand, within MPMX20_04524at 4734.495 kb on + strand, within MPMX20_04524at 4734.495 kb on + strand, within MPMX20_04524at 4734.503 kb on - strand, within MPMX20_04524at 4734.640 kb on + strand, within MPMX20_04524at 4734.707 kb on - strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.814 kb on - strand, within MPMX20_04524at 4734.814 kb on - strand, within MPMX20_04524at 4734.814 kb on - strand, within MPMX20_04524at 4734.846 kb on + strand, within MPMX20_04524at 4734.870 kb on - strand, within MPMX20_04524at 4734.961 kb on + strand, within MPMX20_04524at 4734.980 kb on - strand, within MPMX20_04524at 4735.018 kb on - strand, within MPMX20_04524at 4735.039 kb on - strand, within MPMX20_04524at 4735.073 kb on + strand, within MPMX20_04524at 4735.073 kb on + strand, within MPMX20_04524at 4735.090 kb on - strand, within MPMX20_04524at 4735.204 kb on - strand, within MPMX20_04524at 4735.249 kb on + strand, within MPMX20_04524at 4735.293 kb on + strand, within MPMX20_04524at 4735.293 kb on + strand, within MPMX20_04524at 4735.293 kb on + strand, within MPMX20_04524at 4735.298 kb on + strandat 4735.299 kb on - strandat 4735.301 kb on - strandat 4735.392 kb on + strandat 4735.392 kb on + strandat 4735.417 kb on - strandat 4735.463 kb on - strandat 4735.546 kb on + strandat 4735.554 kb on - strandat 4735.554 kb on - strandat 4735.554 kb on - strandat 4735.556 kb on + strandat 4735.556 kb on + strandat 4735.556 kb on + strandat 4735.668 kb on - strandat 4735.668 kb on - strandat 4735.671 kb on + strandat 4735.679 kb on - strandat 4735.712 kb on - strand, within MPMX20_04525at 4735.725 kb on - strand, within MPMX20_04525at 4735.729 kb on + strand, within MPMX20_04525at 4735.835 kb on + strand, within MPMX20_04525at 4735.925 kb on - strand, within MPMX20_04525at 4736.007 kb on + strand, within MPMX20_04525at 4736.059 kb on + strand, within MPMX20_04525at 4736.059 kb on + strand, within MPMX20_04525at 4736.059 kb on + strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.097 kb on + strand, within MPMX20_04525at 4736.105 kb on - strand, within MPMX20_04525at 4736.110 kb on - strand, within MPMX20_04525at 4736.182 kb on + strand, within MPMX20_04525at 4736.223 kb on - strand, within MPMX20_04525at 4736.234 kb on - strand, within MPMX20_04525at 4736.477 kb on + strandat 4736.477 kb on + strandat 4736.480 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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4,732,070 - MPMX20_04523 0.51 -1.4
4,732,075 - MPMX20_04523 0.51 -0.9
4,732,189 + MPMX20_04523 0.61 -4.4
4,732,224 + MPMX20_04523 0.64 -2.2
4,732,232 - MPMX20_04523 0.65 -0.7
4,732,251 - MPMX20_04523 0.66 -2.9
4,732,298 - MPMX20_04523 0.70 -3.2
4,732,377 + MPMX20_04523 0.77 -4.0
4,732,482 - MPMX20_04523 0.86 -2.3
4,732,504 + MPMX20_04523 0.88 -4.3
4,732,509 + MPMX20_04523 0.89 -1.1
4,732,509 + MPMX20_04523 0.89 -3.0
4,732,509 + MPMX20_04523 0.89 -5.0
4,732,509 + MPMX20_04523 0.89 -4.6
4,732,517 - MPMX20_04523 0.89 -2.2
4,732,589 - -4.5
4,732,593 + -2.7
4,732,612 + +1.1
4,732,674 + -0.9
4,732,680 + -0.8
4,732,680 + +1.6
4,732,680 + +1.0
4,732,680 + +0.3
4,732,682 - +0.6
4,732,688 - -0.1
4,732,688 - -0.9
4,732,688 - -0.1
4,732,688 - -0.9
4,732,688 - +0.5
4,732,688 - -0.7
4,732,727 + +0.5
4,732,727 + +1.9
4,732,779 - -1.1
4,732,835 - -0.9
4,732,941 - -3.2
4,732,941 - -3.3
4,732,970 - -1.2
4,733,077 + -0.5
4,733,085 - -4.1
4,733,152 + -3.6
4,733,165 + -2.9
4,733,168 - -3.9
4,733,282 + MPMX20_04524 0.14 -4.5
4,733,312 - MPMX20_04524 0.15 -0.4
4,733,316 - MPMX20_04524 0.15 -3.8
4,733,369 + MPMX20_04524 0.17 -1.5
4,733,369 - MPMX20_04524 0.17 -1.9
4,733,379 + MPMX20_04524 0.18 -2.6
4,733,456 + MPMX20_04524 0.21 -2.7
4,733,461 + MPMX20_04524 0.21 -3.0
4,733,461 + MPMX20_04524 0.21 -2.6
4,733,461 + MPMX20_04524 0.21 -3.8
4,733,469 - MPMX20_04524 0.21 -4.3
4,733,493 + MPMX20_04524 0.22 -2.5
4,733,493 + MPMX20_04524 0.22 -3.0
4,733,512 + MPMX20_04524 0.23 -2.9
4,733,523 + MPMX20_04524 0.23 -3.3
4,733,524 - MPMX20_04524 0.23 -1.9
4,733,548 + MPMX20_04524 0.24 -2.2
4,733,548 + MPMX20_04524 0.24 -3.9
4,733,590 + MPMX20_04524 0.26 -2.8
4,733,770 - MPMX20_04524 0.32 -1.1
4,733,777 - MPMX20_04524 0.33 -3.9
4,733,785 + MPMX20_04524 0.33 -0.9
4,733,796 + MPMX20_04524 0.33 -2.9
4,733,796 + MPMX20_04524 0.33 -1.5
4,733,796 + MPMX20_04524 0.33 -2.6
4,733,796 + MPMX20_04524 0.33 -4.3
4,733,796 + MPMX20_04524 0.33 -0.7
4,733,804 - MPMX20_04524 0.34 -2.9
4,733,804 - MPMX20_04524 0.34 -3.8
4,733,804 - MPMX20_04524 0.34 -4.4
4,733,804 - MPMX20_04524 0.34 -4.0
4,733,806 - MPMX20_04524 0.34 -2.7
4,733,828 - MPMX20_04524 0.35 -3.2
4,733,864 - MPMX20_04524 0.36 -0.4
4,733,883 - MPMX20_04524 0.37 -2.9
4,733,890 + MPMX20_04524 0.37 -3.1
4,733,970 - MPMX20_04524 0.40 -3.5
4,733,983 - MPMX20_04524 0.40 -3.3
4,734,037 + MPMX20_04524 0.42 -2.2
4,734,037 + MPMX20_04524 0.42 -4.0
4,734,045 - MPMX20_04524 0.43 -2.8
4,734,229 + MPMX20_04524 0.50 -2.8
4,734,248 - MPMX20_04524 0.50 -1.8
4,734,254 + MPMX20_04524 0.51 -1.9
4,734,269 + MPMX20_04524 0.51 -2.6
4,734,277 - MPMX20_04524 0.52 -2.6
4,734,279 + MPMX20_04524 0.52 -1.2
4,734,279 + MPMX20_04524 0.52 -2.8
4,734,279 - MPMX20_04524 0.52 -2.0
4,734,403 - MPMX20_04524 0.56 -1.8
4,734,445 - MPMX20_04524 0.58 -1.4
4,734,480 - MPMX20_04524 0.59 -4.3
4,734,480 - MPMX20_04524 0.59 -3.3
4,734,495 + MPMX20_04524 0.60 -3.4
4,734,495 + MPMX20_04524 0.60 -1.1
4,734,503 - MPMX20_04524 0.60 -3.4
4,734,640 + MPMX20_04524 0.65 -4.2
4,734,707 - MPMX20_04524 0.68 -2.6
4,734,806 + MPMX20_04524 0.71 -3.4
4,734,806 + MPMX20_04524 0.71 -1.7
4,734,806 + MPMX20_04524 0.71 -2.0
4,734,806 + MPMX20_04524 0.71 -5.3
4,734,814 - MPMX20_04524 0.72 -2.8
4,734,814 - MPMX20_04524 0.72 -2.7
4,734,814 - MPMX20_04524 0.72 -3.9
4,734,846 + MPMX20_04524 0.73 -1.9
4,734,870 - MPMX20_04524 0.74 -4.7
4,734,961 + MPMX20_04524 0.77 -3.4
4,734,980 - MPMX20_04524 0.78 -0.7
4,735,018 - MPMX20_04524 0.79 -3.9
4,735,039 - MPMX20_04524 0.80 -2.8
4,735,073 + MPMX20_04524 0.82 -4.6
4,735,073 + MPMX20_04524 0.82 -3.2
4,735,090 - MPMX20_04524 0.82 -2.3
4,735,204 - MPMX20_04524 0.87 -0.7
4,735,249 + MPMX20_04524 0.88 -2.7
4,735,293 + MPMX20_04524 0.90 -2.1
4,735,293 + MPMX20_04524 0.90 -2.1
4,735,293 + MPMX20_04524 0.90 -4.0
4,735,298 + -2.5
4,735,299 - -2.3
4,735,301 - -3.6
4,735,392 + -4.9
4,735,392 + -3.1
4,735,417 - -3.8
4,735,463 - -1.9
4,735,546 + -0.1
4,735,554 - -1.5
4,735,554 - -3.6
4,735,554 - -2.3
4,735,556 + +0.5
4,735,556 + +2.9
4,735,556 + +0.9
4,735,668 - -0.3
4,735,668 - -0.0
4,735,671 + -1.3
4,735,679 - -1.4
4,735,712 - MPMX20_04525 0.11 -0.2
4,735,725 - MPMX20_04525 0.13 -0.2
4,735,729 + MPMX20_04525 0.14 +0.6
4,735,835 + MPMX20_04525 0.27 -0.4
4,735,925 - MPMX20_04525 0.39 -0.7
4,736,007 + MPMX20_04525 0.50 +0.6
4,736,059 + MPMX20_04525 0.57 +0.1
4,736,059 + MPMX20_04525 0.57 -1.7
4,736,059 + MPMX20_04525 0.57 +1.2
4,736,067 - MPMX20_04525 0.58 +0.7
4,736,067 - MPMX20_04525 0.58 -0.4
4,736,067 - MPMX20_04525 0.58 -0.1
4,736,067 - MPMX20_04525 0.58 +0.7
4,736,067 - MPMX20_04525 0.58 -2.2
4,736,097 + MPMX20_04525 0.62 -0.2
4,736,105 - MPMX20_04525 0.63 +0.8
4,736,110 - MPMX20_04525 0.63 -0.0
4,736,182 + MPMX20_04525 0.73 -0.8
4,736,223 - MPMX20_04525 0.78 +0.9
4,736,234 - MPMX20_04525 0.80 -0.4
4,736,477 + +0.0
4,736,477 + -0.4
4,736,480 - -0.7

Or see this region's nucleotide sequence