Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04523 and MPMX20_04524 are separated by 270 nucleotides MPMX20_04524 and MPMX20_04525 are separated by 63 nucleotides MPMX20_04525 and MPMX20_04526 are separated by 128 nucleotides
MPMX20_04523: MPMX20_04523 - Acetylornithine deacetylase, at 4,731,488 to 4,732,639
_04523
MPMX20_04524: MPMX20_04524 - Phosphoenolpyruvate carboxylase, at 4,732,910 to 4,735,561
_04524
MPMX20_04525: MPMX20_04525 - HTH-type transcriptional activator RhaR, at 4,735,625 to 4,736,389
_04525
MPMX20_04526: MPMX20_04526 - Fructose-6-phosphate aldolase 2, at 4,736,518 to 4,737,180
_04526
Position (kb)
4732
4733
4734
4735
4736 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 4732.070 kb on - strand, within MPMX20_04523 at 4732.075 kb on - strand, within MPMX20_04523 at 4732.189 kb on + strand, within MPMX20_04523 at 4732.224 kb on + strand, within MPMX20_04523 at 4732.232 kb on - strand, within MPMX20_04523 at 4732.251 kb on - strand, within MPMX20_04523 at 4732.298 kb on - strand, within MPMX20_04523 at 4732.377 kb on + strand, within MPMX20_04523 at 4732.482 kb on - strand, within MPMX20_04523 at 4732.504 kb on + strand, within MPMX20_04523 at 4732.509 kb on + strand, within MPMX20_04523 at 4732.509 kb on + strand, within MPMX20_04523 at 4732.509 kb on + strand, within MPMX20_04523 at 4732.509 kb on + strand, within MPMX20_04523 at 4732.517 kb on - strand, within MPMX20_04523 at 4732.589 kb on - strand at 4732.593 kb on + strand at 4732.612 kb on + strand at 4732.674 kb on + strand at 4732.680 kb on + strand at 4732.680 kb on + strand at 4732.680 kb on + strand at 4732.680 kb on + strand at 4732.682 kb on - strand at 4732.688 kb on - strand at 4732.688 kb on - strand at 4732.688 kb on - strand at 4732.688 kb on - strand at 4732.688 kb on - strand at 4732.688 kb on - strand at 4732.727 kb on + strand at 4732.727 kb on + strand at 4732.779 kb on - strand at 4732.835 kb on - strand at 4732.941 kb on - strand at 4732.941 kb on - strand at 4732.970 kb on - strand at 4733.077 kb on + strand at 4733.085 kb on - strand at 4733.152 kb on + strand at 4733.165 kb on + strand at 4733.168 kb on - strand at 4733.282 kb on + strand, within MPMX20_04524 at 4733.312 kb on - strand, within MPMX20_04524 at 4733.316 kb on - strand, within MPMX20_04524 at 4733.369 kb on + strand, within MPMX20_04524 at 4733.369 kb on - strand, within MPMX20_04524 at 4733.379 kb on + strand, within MPMX20_04524 at 4733.456 kb on + strand, within MPMX20_04524 at 4733.461 kb on + strand, within MPMX20_04524 at 4733.461 kb on + strand, within MPMX20_04524 at 4733.461 kb on + strand, within MPMX20_04524 at 4733.469 kb on - strand, within MPMX20_04524 at 4733.493 kb on + strand, within MPMX20_04524 at 4733.493 kb on + strand, within MPMX20_04524 at 4733.512 kb on + strand, within MPMX20_04524 at 4733.523 kb on + strand, within MPMX20_04524 at 4733.524 kb on - strand, within MPMX20_04524 at 4733.548 kb on + strand, within MPMX20_04524 at 4733.548 kb on + strand, within MPMX20_04524 at 4733.590 kb on + strand, within MPMX20_04524 at 4733.770 kb on - strand, within MPMX20_04524 at 4733.777 kb on - strand, within MPMX20_04524 at 4733.785 kb on + strand, within MPMX20_04524 at 4733.796 kb on + strand, within MPMX20_04524 at 4733.796 kb on + strand, within MPMX20_04524 at 4733.796 kb on + strand, within MPMX20_04524 at 4733.796 kb on + strand, within MPMX20_04524 at 4733.796 kb on + strand, within MPMX20_04524 at 4733.804 kb on - strand, within MPMX20_04524 at 4733.804 kb on - strand, within MPMX20_04524 at 4733.804 kb on - strand, within MPMX20_04524 at 4733.804 kb on - strand, within MPMX20_04524 at 4733.806 kb on - strand, within MPMX20_04524 at 4733.828 kb on - strand, within MPMX20_04524 at 4733.864 kb on - strand, within MPMX20_04524 at 4733.883 kb on - strand, within MPMX20_04524 at 4733.890 kb on + strand, within MPMX20_04524 at 4733.970 kb on - strand, within MPMX20_04524 at 4733.983 kb on - strand, within MPMX20_04524 at 4734.037 kb on + strand, within MPMX20_04524 at 4734.037 kb on + strand, within MPMX20_04524 at 4734.045 kb on - strand, within MPMX20_04524 at 4734.229 kb on + strand, within MPMX20_04524 at 4734.248 kb on - strand, within MPMX20_04524 at 4734.254 kb on + strand, within MPMX20_04524 at 4734.269 kb on + strand, within MPMX20_04524 at 4734.277 kb on - strand, within MPMX20_04524 at 4734.279 kb on + strand, within MPMX20_04524 at 4734.279 kb on + strand, within MPMX20_04524 at 4734.279 kb on - strand, within MPMX20_04524 at 4734.403 kb on - strand, within MPMX20_04524 at 4734.445 kb on - strand, within MPMX20_04524 at 4734.480 kb on - strand, within MPMX20_04524 at 4734.480 kb on - strand, within MPMX20_04524 at 4734.495 kb on + strand, within MPMX20_04524 at 4734.495 kb on + strand, within MPMX20_04524 at 4734.503 kb on - strand, within MPMX20_04524 at 4734.640 kb on + strand, within MPMX20_04524 at 4734.707 kb on - strand, within MPMX20_04524 at 4734.806 kb on + strand, within MPMX20_04524 at 4734.806 kb on + strand, within MPMX20_04524 at 4734.806 kb on + strand, within MPMX20_04524 at 4734.806 kb on + strand, within MPMX20_04524 at 4734.814 kb on - strand, within MPMX20_04524 at 4734.814 kb on - strand, within MPMX20_04524 at 4734.814 kb on - strand, within MPMX20_04524 at 4734.846 kb on + strand, within MPMX20_04524 at 4734.870 kb on - strand, within MPMX20_04524 at 4734.961 kb on + strand, within MPMX20_04524 at 4734.980 kb on - strand, within MPMX20_04524 at 4735.018 kb on - strand, within MPMX20_04524 at 4735.039 kb on - strand, within MPMX20_04524 at 4735.073 kb on + strand, within MPMX20_04524 at 4735.073 kb on + strand, within MPMX20_04524 at 4735.090 kb on - strand, within MPMX20_04524 at 4735.204 kb on - strand, within MPMX20_04524 at 4735.249 kb on + strand, within MPMX20_04524 at 4735.293 kb on + strand, within MPMX20_04524 at 4735.293 kb on + strand, within MPMX20_04524 at 4735.293 kb on + strand, within MPMX20_04524 at 4735.298 kb on + strand at 4735.299 kb on - strand at 4735.301 kb on - strand at 4735.392 kb on + strand at 4735.392 kb on + strand at 4735.417 kb on - strand at 4735.463 kb on - strand at 4735.546 kb on + strand at 4735.554 kb on - strand at 4735.554 kb on - strand at 4735.554 kb on - strand at 4735.556 kb on + strand at 4735.556 kb on + strand at 4735.556 kb on + strand at 4735.668 kb on - strand at 4735.668 kb on - strand at 4735.671 kb on + strand at 4735.679 kb on - strand at 4735.712 kb on - strand, within MPMX20_04525 at 4735.725 kb on - strand, within MPMX20_04525 at 4735.729 kb on + strand, within MPMX20_04525 at 4735.835 kb on + strand, within MPMX20_04525 at 4735.925 kb on - strand, within MPMX20_04525 at 4736.007 kb on + strand, within MPMX20_04525 at 4736.059 kb on + strand, within MPMX20_04525 at 4736.059 kb on + strand, within MPMX20_04525 at 4736.059 kb on + strand, within MPMX20_04525 at 4736.067 kb on - strand, within MPMX20_04525 at 4736.067 kb on - strand, within MPMX20_04525 at 4736.067 kb on - strand, within MPMX20_04525 at 4736.067 kb on - strand, within MPMX20_04525 at 4736.067 kb on - strand, within MPMX20_04525 at 4736.097 kb on + strand, within MPMX20_04525 at 4736.105 kb on - strand, within MPMX20_04525 at 4736.110 kb on - strand, within MPMX20_04525 at 4736.182 kb on + strand, within MPMX20_04525 at 4736.223 kb on - strand, within MPMX20_04525 at 4736.234 kb on - strand, within MPMX20_04525 at 4736.477 kb on + strand at 4736.477 kb on + strand at 4736.480 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 4,732,070 - MPMX20_04523 0.51 -1.4 4,732,075 - MPMX20_04523 0.51 -0.9 4,732,189 + MPMX20_04523 0.61 -4.4 4,732,224 + MPMX20_04523 0.64 -2.2 4,732,232 - MPMX20_04523 0.65 -0.7 4,732,251 - MPMX20_04523 0.66 -2.9 4,732,298 - MPMX20_04523 0.70 -3.2 4,732,377 + MPMX20_04523 0.77 -4.0 4,732,482 - MPMX20_04523 0.86 -2.3 4,732,504 + MPMX20_04523 0.88 -4.3 4,732,509 + MPMX20_04523 0.89 -1.1 4,732,509 + MPMX20_04523 0.89 -3.0 4,732,509 + MPMX20_04523 0.89 -5.0 4,732,509 + MPMX20_04523 0.89 -4.6 4,732,517 - MPMX20_04523 0.89 -2.2 4,732,589 - -4.5 4,732,593 + -2.7 4,732,612 + +1.1 4,732,674 + -0.9 4,732,680 + -0.8 4,732,680 + +1.6 4,732,680 + +1.0 4,732,680 + +0.3 4,732,682 - +0.6 4,732,688 - -0.1 4,732,688 - -0.9 4,732,688 - -0.1 4,732,688 - -0.9 4,732,688 - +0.5 4,732,688 - -0.7 4,732,727 + +0.5 4,732,727 + +1.9 4,732,779 - -1.1 4,732,835 - -0.9 4,732,941 - -3.2 4,732,941 - -3.3 4,732,970 - -1.2 4,733,077 + -0.5 4,733,085 - -4.1 4,733,152 + -3.6 4,733,165 + -2.9 4,733,168 - -3.9 4,733,282 + MPMX20_04524 0.14 -4.5 4,733,312 - MPMX20_04524 0.15 -0.4 4,733,316 - MPMX20_04524 0.15 -3.8 4,733,369 + MPMX20_04524 0.17 -1.5 4,733,369 - MPMX20_04524 0.17 -1.9 4,733,379 + MPMX20_04524 0.18 -2.6 4,733,456 + MPMX20_04524 0.21 -2.7 4,733,461 + MPMX20_04524 0.21 -3.0 4,733,461 + MPMX20_04524 0.21 -2.6 4,733,461 + MPMX20_04524 0.21 -3.8 4,733,469 - MPMX20_04524 0.21 -4.3 4,733,493 + MPMX20_04524 0.22 -2.5 4,733,493 + MPMX20_04524 0.22 -3.0 4,733,512 + MPMX20_04524 0.23 -2.9 4,733,523 + MPMX20_04524 0.23 -3.3 4,733,524 - MPMX20_04524 0.23 -1.9 4,733,548 + MPMX20_04524 0.24 -2.2 4,733,548 + MPMX20_04524 0.24 -3.9 4,733,590 + MPMX20_04524 0.26 -2.8 4,733,770 - MPMX20_04524 0.32 -1.1 4,733,777 - MPMX20_04524 0.33 -3.9 4,733,785 + MPMX20_04524 0.33 -0.9 4,733,796 + MPMX20_04524 0.33 -2.9 4,733,796 + MPMX20_04524 0.33 -1.5 4,733,796 + MPMX20_04524 0.33 -2.6 4,733,796 + MPMX20_04524 0.33 -4.3 4,733,796 + MPMX20_04524 0.33 -0.7 4,733,804 - MPMX20_04524 0.34 -2.9 4,733,804 - MPMX20_04524 0.34 -3.8 4,733,804 - MPMX20_04524 0.34 -4.4 4,733,804 - MPMX20_04524 0.34 -4.0 4,733,806 - MPMX20_04524 0.34 -2.7 4,733,828 - MPMX20_04524 0.35 -3.2 4,733,864 - MPMX20_04524 0.36 -0.4 4,733,883 - MPMX20_04524 0.37 -2.9 4,733,890 + MPMX20_04524 0.37 -3.1 4,733,970 - MPMX20_04524 0.40 -3.5 4,733,983 - MPMX20_04524 0.40 -3.3 4,734,037 + MPMX20_04524 0.42 -2.2 4,734,037 + MPMX20_04524 0.42 -4.0 4,734,045 - MPMX20_04524 0.43 -2.8 4,734,229 + MPMX20_04524 0.50 -2.8 4,734,248 - MPMX20_04524 0.50 -1.8 4,734,254 + MPMX20_04524 0.51 -1.9 4,734,269 + MPMX20_04524 0.51 -2.6 4,734,277 - MPMX20_04524 0.52 -2.6 4,734,279 + MPMX20_04524 0.52 -1.2 4,734,279 + MPMX20_04524 0.52 -2.8 4,734,279 - MPMX20_04524 0.52 -2.0 4,734,403 - MPMX20_04524 0.56 -1.8 4,734,445 - MPMX20_04524 0.58 -1.4 4,734,480 - MPMX20_04524 0.59 -4.3 4,734,480 - MPMX20_04524 0.59 -3.3 4,734,495 + MPMX20_04524 0.60 -3.4 4,734,495 + MPMX20_04524 0.60 -1.1 4,734,503 - MPMX20_04524 0.60 -3.4 4,734,640 + MPMX20_04524 0.65 -4.2 4,734,707 - MPMX20_04524 0.68 -2.6 4,734,806 + MPMX20_04524 0.71 -3.4 4,734,806 + MPMX20_04524 0.71 -1.7 4,734,806 + MPMX20_04524 0.71 -2.0 4,734,806 + MPMX20_04524 0.71 -5.3 4,734,814 - MPMX20_04524 0.72 -2.8 4,734,814 - MPMX20_04524 0.72 -2.7 4,734,814 - MPMX20_04524 0.72 -3.9 4,734,846 + MPMX20_04524 0.73 -1.9 4,734,870 - MPMX20_04524 0.74 -4.7 4,734,961 + MPMX20_04524 0.77 -3.4 4,734,980 - MPMX20_04524 0.78 -0.7 4,735,018 - MPMX20_04524 0.79 -3.9 4,735,039 - MPMX20_04524 0.80 -2.8 4,735,073 + MPMX20_04524 0.82 -4.6 4,735,073 + MPMX20_04524 0.82 -3.2 4,735,090 - MPMX20_04524 0.82 -2.3 4,735,204 - MPMX20_04524 0.87 -0.7 4,735,249 + MPMX20_04524 0.88 -2.7 4,735,293 + MPMX20_04524 0.90 -2.1 4,735,293 + MPMX20_04524 0.90 -2.1 4,735,293 + MPMX20_04524 0.90 -4.0 4,735,298 + -2.5 4,735,299 - -2.3 4,735,301 - -3.6 4,735,392 + -4.9 4,735,392 + -3.1 4,735,417 - -3.8 4,735,463 - -1.9 4,735,546 + -0.1 4,735,554 - -1.5 4,735,554 - -3.6 4,735,554 - -2.3 4,735,556 + +0.5 4,735,556 + +2.9 4,735,556 + +0.9 4,735,668 - -0.3 4,735,668 - -0.0 4,735,671 + -1.3 4,735,679 - -1.4 4,735,712 - MPMX20_04525 0.11 -0.2 4,735,725 - MPMX20_04525 0.13 -0.2 4,735,729 + MPMX20_04525 0.14 +0.6 4,735,835 + MPMX20_04525 0.27 -0.4 4,735,925 - MPMX20_04525 0.39 -0.7 4,736,007 + MPMX20_04525 0.50 +0.6 4,736,059 + MPMX20_04525 0.57 +0.1 4,736,059 + MPMX20_04525 0.57 -1.7 4,736,059 + MPMX20_04525 0.57 +1.2 4,736,067 - MPMX20_04525 0.58 +0.7 4,736,067 - MPMX20_04525 0.58 -0.4 4,736,067 - MPMX20_04525 0.58 -0.1 4,736,067 - MPMX20_04525 0.58 +0.7 4,736,067 - MPMX20_04525 0.58 -2.2 4,736,097 + MPMX20_04525 0.62 -0.2 4,736,105 - MPMX20_04525 0.63 +0.8 4,736,110 - MPMX20_04525 0.63 -0.0 4,736,182 + MPMX20_04525 0.73 -0.8 4,736,223 - MPMX20_04525 0.78 +0.9 4,736,234 - MPMX20_04525 0.80 -0.4 4,736,477 + +0.0 4,736,477 + -0.4 4,736,480 - -0.7
Or see this region's nucleotide sequence