Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04522

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04520 and MPMX20_04521 are separated by 78 nucleotidesMPMX20_04521 and MPMX20_04522 are separated by 9 nucleotidesMPMX20_04522 and MPMX20_04523 are separated by 88 nucleotides MPMX20_04520: MPMX20_04520 - Argininosuccinate lyase, at 4,728,160 to 4,729,533 _04520 MPMX20_04521: MPMX20_04521 - Acetylglutamate kinase, at 4,729,612 to 4,730,385 _04521 MPMX20_04522: MPMX20_04522 - N-acetyl-gamma-glutamyl-phosphate reductase, at 4,730,395 to 4,731,399 _04522 MPMX20_04523: MPMX20_04523 - Acetylornithine deacetylase, at 4,731,488 to 4,732,639 _04523 Position (kb) 4730 4731 4732Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 4729.399 kb on + strandat 4729.489 kb on + strandat 4729.508 kb on + strandat 4729.528 kb on - strandat 4729.579 kb on + strandat 4729.579 kb on + strandat 4729.582 kb on - strandat 4729.584 kb on + strandat 4729.587 kb on - strandat 4729.592 kb on - strandat 4729.651 kb on - strandat 4729.651 kb on - strandat 4729.760 kb on + strand, within MPMX20_04521at 4729.902 kb on + strand, within MPMX20_04521at 4729.949 kb on + strand, within MPMX20_04521at 4729.949 kb on - strand, within MPMX20_04521at 4729.949 kb on - strand, within MPMX20_04521at 4729.973 kb on + strand, within MPMX20_04521at 4729.995 kb on + strand, within MPMX20_04521at 4730.011 kb on - strand, within MPMX20_04521at 4730.017 kb on - strand, within MPMX20_04521at 4730.018 kb on + strand, within MPMX20_04521at 4730.021 kb on - strand, within MPMX20_04521at 4730.028 kb on + strand, within MPMX20_04521at 4730.055 kb on + strand, within MPMX20_04521at 4730.063 kb on - strand, within MPMX20_04521at 4730.079 kb on + strand, within MPMX20_04521at 4730.082 kb on - strand, within MPMX20_04521at 4730.083 kb on - strand, within MPMX20_04521at 4730.091 kb on - strand, within MPMX20_04521at 4730.091 kb on - strand, within MPMX20_04521at 4730.175 kb on + strand, within MPMX20_04521at 4730.183 kb on + strand, within MPMX20_04521at 4730.191 kb on - strand, within MPMX20_04521at 4730.220 kb on + strand, within MPMX20_04521at 4730.326 kb on + strandat 4730.334 kb on + strandat 4730.334 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.344 kb on + strandat 4730.349 kb on + strandat 4730.349 kb on + strandat 4730.352 kb on + strandat 4730.352 kb on + strandat 4730.352 kb on - strandat 4730.433 kb on + strandat 4730.443 kb on + strandat 4730.452 kb on - strandat 4730.476 kb on + strandat 4730.606 kb on + strand, within MPMX20_04522at 4730.611 kb on + strand, within MPMX20_04522at 4730.624 kb on - strand, within MPMX20_04522at 4730.709 kb on - strand, within MPMX20_04522at 4730.709 kb on - strand, within MPMX20_04522at 4730.709 kb on - strand, within MPMX20_04522at 4730.719 kb on + strand, within MPMX20_04522at 4730.792 kb on - strand, within MPMX20_04522at 4730.792 kb on - strand, within MPMX20_04522at 4730.874 kb on + strand, within MPMX20_04522at 4730.897 kb on - strand, within MPMX20_04522at 4730.942 kb on - strand, within MPMX20_04522at 4730.983 kb on + strand, within MPMX20_04522at 4730.991 kb on + strand, within MPMX20_04522at 4730.999 kb on - strand, within MPMX20_04522at 4730.999 kb on - strand, within MPMX20_04522at 4731.001 kb on + strand, within MPMX20_04522at 4731.028 kb on + strand, within MPMX20_04522at 4731.030 kb on + strand, within MPMX20_04522at 4731.038 kb on - strand, within MPMX20_04522at 4731.038 kb on - strand, within MPMX20_04522at 4731.070 kb on + strand, within MPMX20_04522at 4731.094 kb on - strand, within MPMX20_04522at 4731.095 kb on + strand, within MPMX20_04522at 4731.185 kb on - strand, within MPMX20_04522at 4731.286 kb on + strand, within MPMX20_04522at 4731.286 kb on + strand, within MPMX20_04522at 4731.291 kb on + strand, within MPMX20_04522at 4731.291 kb on + strand, within MPMX20_04522at 4731.294 kb on - strand, within MPMX20_04522at 4731.343 kb on + strandat 4731.359 kb on - strandat 4731.406 kb on + strandat 4731.414 kb on - strandat 4731.469 kb on + strandat 4731.542 kb on + strandat 4731.550 kb on - strandat 4731.572 kb on + strandat 4731.640 kb on + strand, within MPMX20_04523at 4731.687 kb on + strand, within MPMX20_04523at 4731.687 kb on + strand, within MPMX20_04523at 4731.695 kb on - strand, within MPMX20_04523at 4731.697 kb on + strand, within MPMX20_04523at 4731.720 kb on - strand, within MPMX20_04523at 4731.771 kb on + strand, within MPMX20_04523at 4731.789 kb on - strand, within MPMX20_04523at 4731.807 kb on - strand, within MPMX20_04523at 4731.862 kb on - strand, within MPMX20_04523at 4731.867 kb on - strand, within MPMX20_04523at 4731.883 kb on + strand, within MPMX20_04523at 4731.886 kb on - strand, within MPMX20_04523at 4731.888 kb on - strand, within MPMX20_04523at 4732.070 kb on - strand, within MPMX20_04523at 4732.075 kb on - strand, within MPMX20_04523at 4732.189 kb on + strand, within MPMX20_04523at 4732.224 kb on + strand, within MPMX20_04523at 4732.232 kb on - strand, within MPMX20_04523at 4732.251 kb on - strand, within MPMX20_04523at 4732.298 kb on - strand, within MPMX20_04523at 4732.377 kb on + strand, within MPMX20_04523

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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4,729,399 + -4.4
4,729,489 + -3.5
4,729,508 + -4.4
4,729,528 - -1.2
4,729,579 + -0.7
4,729,579 + -2.4
4,729,582 - +0.9
4,729,584 + -2.6
4,729,587 - -1.0
4,729,592 - +3.5
4,729,651 - -0.9
4,729,651 - -2.7
4,729,760 + MPMX20_04521 0.19 -1.2
4,729,902 + MPMX20_04521 0.37 -1.5
4,729,949 + MPMX20_04521 0.44 -3.0
4,729,949 - MPMX20_04521 0.44 -0.9
4,729,949 - MPMX20_04521 0.44 -2.1
4,729,973 + MPMX20_04521 0.47 -3.2
4,729,995 + MPMX20_04521 0.49 -1.0
4,730,011 - MPMX20_04521 0.52 -2.9
4,730,017 - MPMX20_04521 0.52 -4.1
4,730,018 + MPMX20_04521 0.52 -0.1
4,730,021 - MPMX20_04521 0.53 -1.8
4,730,028 + MPMX20_04521 0.54 -1.1
4,730,055 + MPMX20_04521 0.57 -4.0
4,730,063 - MPMX20_04521 0.58 -4.1
4,730,079 + MPMX20_04521 0.60 -3.5
4,730,082 - MPMX20_04521 0.61 -3.2
4,730,083 - MPMX20_04521 0.61 -3.1
4,730,091 - MPMX20_04521 0.62 -3.4
4,730,091 - MPMX20_04521 0.62 -0.4
4,730,175 + MPMX20_04521 0.73 -2.9
4,730,183 + MPMX20_04521 0.74 -4.6
4,730,191 - MPMX20_04521 0.75 -4.3
4,730,220 + MPMX20_04521 0.79 -0.9
4,730,326 + -2.5
4,730,334 + -4.1
4,730,334 + -3.5
4,730,344 + -1.8
4,730,344 + -4.7
4,730,344 + -2.9
4,730,344 + -2.9
4,730,344 + -4.5
4,730,344 + -2.3
4,730,344 + -3.5
4,730,344 + -2.5
4,730,349 + -3.7
4,730,349 + -2.1
4,730,352 + -3.8
4,730,352 + -0.7
4,730,352 - -3.7
4,730,433 + -2.4
4,730,443 + -2.6
4,730,452 - -2.2
4,730,476 + -3.4
4,730,606 + MPMX20_04522 0.21 -4.4
4,730,611 + MPMX20_04522 0.21 -2.2
4,730,624 - MPMX20_04522 0.23 -3.8
4,730,709 - MPMX20_04522 0.31 -2.9
4,730,709 - MPMX20_04522 0.31 -1.4
4,730,709 - MPMX20_04522 0.31 -3.6
4,730,719 + MPMX20_04522 0.32 -2.9
4,730,792 - MPMX20_04522 0.40 -0.9
4,730,792 - MPMX20_04522 0.40 -1.8
4,730,874 + MPMX20_04522 0.48 -0.1
4,730,897 - MPMX20_04522 0.50 -4.1
4,730,942 - MPMX20_04522 0.54 -3.8
4,730,983 + MPMX20_04522 0.59 -1.2
4,730,991 + MPMX20_04522 0.59 -2.9
4,730,999 - MPMX20_04522 0.60 -0.9
4,730,999 - MPMX20_04522 0.60 -3.7
4,731,001 + MPMX20_04522 0.60 -4.8
4,731,028 + MPMX20_04522 0.63 -2.8
4,731,030 + MPMX20_04522 0.63 -3.2
4,731,038 - MPMX20_04522 0.64 -4.0
4,731,038 - MPMX20_04522 0.64 -1.8
4,731,070 + MPMX20_04522 0.67 -2.5
4,731,094 - MPMX20_04522 0.70 -3.8
4,731,095 + MPMX20_04522 0.70 -1.5
4,731,185 - MPMX20_04522 0.79 -3.9
4,731,286 + MPMX20_04522 0.89 -0.9
4,731,286 + MPMX20_04522 0.89 -2.0
4,731,291 + MPMX20_04522 0.89 -3.4
4,731,291 + MPMX20_04522 0.89 -1.6
4,731,294 - MPMX20_04522 0.89 -4.0
4,731,343 + -2.1
4,731,359 - -3.1
4,731,406 + -2.7
4,731,414 - -0.1
4,731,469 + -2.1
4,731,542 + -5.0
4,731,550 - -2.2
4,731,572 + -4.5
4,731,640 + MPMX20_04523 0.13 -0.9
4,731,687 + MPMX20_04523 0.17 -3.8
4,731,687 + MPMX20_04523 0.17 -2.4
4,731,695 - MPMX20_04523 0.18 -3.8
4,731,697 + MPMX20_04523 0.18 -1.8
4,731,720 - MPMX20_04523 0.20 -3.4
4,731,771 + MPMX20_04523 0.25 -3.9
4,731,789 - MPMX20_04523 0.26 -0.7
4,731,807 - MPMX20_04523 0.28 -3.5
4,731,862 - MPMX20_04523 0.32 -3.9
4,731,867 - MPMX20_04523 0.33 -3.6
4,731,883 + MPMX20_04523 0.34 -6.0
4,731,886 - MPMX20_04523 0.35 -2.5
4,731,888 - MPMX20_04523 0.35 -4.2
4,732,070 - MPMX20_04523 0.51 -1.4
4,732,075 - MPMX20_04523 0.51 -0.9
4,732,189 + MPMX20_04523 0.61 -4.4
4,732,224 + MPMX20_04523 0.64 -2.2
4,732,232 - MPMX20_04523 0.65 -0.7
4,732,251 - MPMX20_04523 0.66 -2.9
4,732,298 - MPMX20_04523 0.70 -3.2
4,732,377 + MPMX20_04523 0.77 -4.0

Or see this region's nucleotide sequence