Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04497 and MPMX20_04498 overlap by 4 nucleotides MPMX20_04498 and MPMX20_04499 overlap by 1 nucleotides
MPMX20_04497: MPMX20_04497 - HTH-type transcriptional regulator GltC, at 4,703,783 to 4,704,673
_04497
MPMX20_04498: MPMX20_04498 - L-threonine dehydratase biosynthetic IlvA, at 4,704,670 to 4,706,217
_04498
MPMX20_04499: MPMX20_04499 - Dihydroxy-acid dehydratase, at 4,706,217 to 4,708,067
_04499
Position (kb)
4704
4705
4706
4707 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4703.786 kb on + strand at 4703.786 kb on + strand at 4703.855 kb on + strand at 4703.855 kb on + strand at 4703.953 kb on + strand, within MPMX20_04497 at 4704.011 kb on - strand, within MPMX20_04497 at 4704.024 kb on + strand, within MPMX20_04497 at 4704.032 kb on - strand, within MPMX20_04497 at 4704.039 kb on + strand, within MPMX20_04497 at 4704.234 kb on - strand, within MPMX20_04497 at 4704.296 kb on + strand, within MPMX20_04497 at 4704.296 kb on + strand, within MPMX20_04497 at 4704.296 kb on + strand, within MPMX20_04497 at 4704.296 kb on + strand, within MPMX20_04497 at 4704.304 kb on - strand, within MPMX20_04497 at 4704.304 kb on - strand, within MPMX20_04497 at 4704.304 kb on - strand, within MPMX20_04497 at 4704.304 kb on - strand, within MPMX20_04497 at 4704.309 kb on - strand, within MPMX20_04497 at 4704.345 kb on + strand, within MPMX20_04497 at 4704.353 kb on - strand, within MPMX20_04497 at 4704.390 kb on + strand, within MPMX20_04497 at 4704.398 kb on - strand, within MPMX20_04497 at 4704.470 kb on + strand, within MPMX20_04497 at 4704.482 kb on + strand, within MPMX20_04497 at 4704.495 kb on - strand, within MPMX20_04497 at 4704.503 kb on - strand, within MPMX20_04497 at 4704.539 kb on - strand, within MPMX20_04497 at 4704.539 kb on - strand, within MPMX20_04497 at 4704.539 kb on - strand, within MPMX20_04497 at 4704.782 kb on - strand at 4704.782 kb on - strand at 4704.782 kb on - strand at 4704.782 kb on - strand at 4704.782 kb on - strand at 4704.838 kb on + strand, within MPMX20_04498 at 4704.907 kb on + strand, within MPMX20_04498 at 4704.915 kb on - strand, within MPMX20_04498 at 4704.990 kb on + strand, within MPMX20_04498 at 4704.994 kb on - strand, within MPMX20_04498 at 4705.044 kb on + strand, within MPMX20_04498 at 4705.065 kb on - strand, within MPMX20_04498 at 4705.070 kb on - strand, within MPMX20_04498 at 4705.096 kb on - strand, within MPMX20_04498 at 4705.168 kb on - strand, within MPMX20_04498 at 4705.226 kb on - strand, within MPMX20_04498 at 4705.283 kb on - strand, within MPMX20_04498 at 4705.314 kb on - strand, within MPMX20_04498 at 4705.608 kb on + strand, within MPMX20_04498 at 4705.623 kb on + strand, within MPMX20_04498 at 4705.623 kb on + strand, within MPMX20_04498 at 4705.680 kb on - strand, within MPMX20_04498 at 4705.688 kb on + strand, within MPMX20_04498 at 4705.719 kb on + strand, within MPMX20_04498 at 4705.731 kb on + strand, within MPMX20_04498 at 4705.759 kb on + strand, within MPMX20_04498 at 4705.812 kb on + strand, within MPMX20_04498 at 4705.820 kb on - strand, within MPMX20_04498 at 4705.833 kb on - strand, within MPMX20_04498 at 4705.833 kb on - strand, within MPMX20_04498 at 4706.028 kb on + strand, within MPMX20_04498 at 4706.028 kb on + strand, within MPMX20_04498 at 4706.036 kb on - strand, within MPMX20_04498 at 4706.036 kb on - strand, within MPMX20_04498 at 4706.036 kb on - strand, within MPMX20_04498 at 4706.036 kb on - strand, within MPMX20_04498 at 4706.043 kb on - strand, within MPMX20_04498 at 4706.080 kb on + strand at 4706.117 kb on + strand at 4706.117 kb on + strand at 4706.118 kb on + strand at 4706.125 kb on - strand at 4706.159 kb on + strand at 4706.162 kb on - strand at 4706.167 kb on - strand at 4706.167 kb on - strand at 4706.167 kb on - strand at 4706.291 kb on + strand at 4706.291 kb on + strand at 4706.331 kb on + strand at 4706.398 kb on - strand at 4706.407 kb on - strand, within MPMX20_04499 at 4706.415 kb on - strand, within MPMX20_04499 at 4706.492 kb on - strand, within MPMX20_04499 at 4706.555 kb on - strand, within MPMX20_04499 at 4706.622 kb on - strand, within MPMX20_04499 at 4706.634 kb on + strand, within MPMX20_04499 at 4706.691 kb on + strand, within MPMX20_04499 at 4706.691 kb on + strand, within MPMX20_04499 at 4706.699 kb on - strand, within MPMX20_04499 at 4706.772 kb on - strand, within MPMX20_04499 at 4706.799 kb on + strand, within MPMX20_04499 at 4706.814 kb on - strand, within MPMX20_04499 at 4706.828 kb on + strand, within MPMX20_04499 at 4706.836 kb on - strand, within MPMX20_04499 at 4706.850 kb on - strand, within MPMX20_04499 at 4706.898 kb on + strand, within MPMX20_04499 at 4706.898 kb on + strand, within MPMX20_04499 at 4706.898 kb on + strand, within MPMX20_04499 at 4706.906 kb on - strand, within MPMX20_04499 at 4706.906 kb on - strand, within MPMX20_04499 at 4706.985 kb on - strand, within MPMX20_04499 at 4707.036 kb on - strand, within MPMX20_04499 at 4707.038 kb on - strand, within MPMX20_04499 at 4707.048 kb on + strand, within MPMX20_04499 at 4707.095 kb on + strand, within MPMX20_04499 at 4707.127 kb on + strand, within MPMX20_04499 at 4707.127 kb on + strand, within MPMX20_04499 at 4707.135 kb on - strand, within MPMX20_04499 at 4707.135 kb on - strand, within MPMX20_04499 at 4707.205 kb on + strand, within MPMX20_04499
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 4,703,786 + -4.0 4,703,786 + -4.8 4,703,855 + -3.2 4,703,855 + -4.5 4,703,953 + MPMX20_04497 0.19 -0.9 4,704,011 - MPMX20_04497 0.26 -2.5 4,704,024 + MPMX20_04497 0.27 -4.0 4,704,032 - MPMX20_04497 0.28 -5.1 4,704,039 + MPMX20_04497 0.29 -2.6 4,704,234 - MPMX20_04497 0.51 -3.7 4,704,296 + MPMX20_04497 0.58 -2.8 4,704,296 + MPMX20_04497 0.58 -4.8 4,704,296 + MPMX20_04497 0.58 -4.4 4,704,296 + MPMX20_04497 0.58 -3.8 4,704,304 - MPMX20_04497 0.58 -2.8 4,704,304 - MPMX20_04497 0.58 -0.9 4,704,304 - MPMX20_04497 0.58 -1.8 4,704,304 - MPMX20_04497 0.58 -3.6 4,704,309 - MPMX20_04497 0.59 -3.2 4,704,345 + MPMX20_04497 0.63 -2.1 4,704,353 - MPMX20_04497 0.64 -2.7 4,704,390 + MPMX20_04497 0.68 -3.3 4,704,398 - MPMX20_04497 0.69 -3.9 4,704,470 + MPMX20_04497 0.77 -2.9 4,704,482 + MPMX20_04497 0.78 +0.9 4,704,495 - MPMX20_04497 0.80 -3.3 4,704,503 - MPMX20_04497 0.81 -2.6 4,704,539 - MPMX20_04497 0.85 -1.1 4,704,539 - MPMX20_04497 0.85 -3.1 4,704,539 - MPMX20_04497 0.85 -2.7 4,704,782 - -4.9 4,704,782 - -4.3 4,704,782 - -2.4 4,704,782 - -2.9 4,704,782 - -3.0 4,704,838 + MPMX20_04498 0.11 -3.0 4,704,907 + MPMX20_04498 0.15 -1.1 4,704,915 - MPMX20_04498 0.16 -1.8 4,704,990 + MPMX20_04498 0.21 -4.6 4,704,994 - MPMX20_04498 0.21 -5.0 4,705,044 + MPMX20_04498 0.24 -3.6 4,705,065 - MPMX20_04498 0.26 -4.9 4,705,070 - MPMX20_04498 0.26 +1.1 4,705,096 - MPMX20_04498 0.28 -1.2 4,705,168 - MPMX20_04498 0.32 -2.7 4,705,226 - MPMX20_04498 0.36 -3.5 4,705,283 - MPMX20_04498 0.40 -2.1 4,705,314 - MPMX20_04498 0.42 -1.0 4,705,608 + MPMX20_04498 0.61 -3.5 4,705,623 + MPMX20_04498 0.62 -2.2 4,705,623 + MPMX20_04498 0.62 -1.9 4,705,680 - MPMX20_04498 0.65 -2.6 4,705,688 + MPMX20_04498 0.66 -2.1 4,705,719 + MPMX20_04498 0.68 -2.4 4,705,731 + MPMX20_04498 0.69 -5.3 4,705,759 + MPMX20_04498 0.70 -3.7 4,705,812 + MPMX20_04498 0.74 -2.4 4,705,820 - MPMX20_04498 0.74 -0.9 4,705,833 - MPMX20_04498 0.75 -3.7 4,705,833 - MPMX20_04498 0.75 -3.5 4,706,028 + MPMX20_04498 0.88 -3.5 4,706,028 + MPMX20_04498 0.88 -4.7 4,706,036 - MPMX20_04498 0.88 -2.9 4,706,036 - MPMX20_04498 0.88 -1.7 4,706,036 - MPMX20_04498 0.88 -4.7 4,706,036 - MPMX20_04498 0.88 -3.8 4,706,043 - MPMX20_04498 0.89 -0.9 4,706,080 + -2.7 4,706,117 + -1.2 4,706,117 + -3.7 4,706,118 + -2.0 4,706,125 - -3.0 4,706,159 + -2.2 4,706,162 - -0.9 4,706,167 - -2.1 4,706,167 - -2.5 4,706,167 - -3.3 4,706,291 + -5.0 4,706,291 + -2.8 4,706,331 + -4.4 4,706,398 - -1.5 4,706,407 - MPMX20_04499 0.10 -1.7 4,706,415 - MPMX20_04499 0.11 -3.2 4,706,492 - MPMX20_04499 0.15 -4.0 4,706,555 - MPMX20_04499 0.18 -4.8 4,706,622 - MPMX20_04499 0.22 -2.7 4,706,634 + MPMX20_04499 0.23 -1.8 4,706,691 + MPMX20_04499 0.26 -2.1 4,706,691 + MPMX20_04499 0.26 -0.7 4,706,699 - MPMX20_04499 0.26 -4.0 4,706,772 - MPMX20_04499 0.30 -4.4 4,706,799 + MPMX20_04499 0.31 +0.9 4,706,814 - MPMX20_04499 0.32 -4.0 4,706,828 + MPMX20_04499 0.33 -5.4 4,706,836 - MPMX20_04499 0.33 -2.6 4,706,850 - MPMX20_04499 0.34 -4.7 4,706,898 + MPMX20_04499 0.37 -3.5 4,706,898 + MPMX20_04499 0.37 -4.3 4,706,898 + MPMX20_04499 0.37 -2.4 4,706,906 - MPMX20_04499 0.37 -4.0 4,706,906 - MPMX20_04499 0.37 -5.2 4,706,985 - MPMX20_04499 0.41 -2.7 4,707,036 - MPMX20_04499 0.44 -3.5 4,707,038 - MPMX20_04499 0.44 -4.4 4,707,048 + MPMX20_04499 0.45 -4.4 4,707,095 + MPMX20_04499 0.47 -3.6 4,707,127 + MPMX20_04499 0.49 -1.7 4,707,127 + MPMX20_04499 0.49 -1.8 4,707,135 - MPMX20_04499 0.50 -5.3 4,707,135 - MPMX20_04499 0.50 -3.9 4,707,205 + MPMX20_04499 0.53 -3.1
Or see this region's nucleotide sequence