Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04077

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04075 and MPMX20_04076 are separated by 207 nucleotidesMPMX20_04076 and MPMX20_04077 are separated by 287 nucleotidesMPMX20_04077 and MPMX20_04078 are separated by 165 nucleotidesMPMX20_04078 and MPMX20_04079 are separated by 9 nucleotidesMPMX20_04079 and MPMX20_04080 are separated by 223 nucleotides MPMX20_04075: MPMX20_04075 - Ribosome maturation factor RimP, at 4,274,166 to 4,274,618 _04075 MPMX20_04076: MPMX20_04076 - tRNA-Met, at 4,274,826 to 4,274,902 _04076 MPMX20_04077: MPMX20_04077 - Argininosuccinate synthase, at 4,275,190 to 4,276,536 _04077 MPMX20_04078: MPMX20_04078 - tRNA-Leu, at 4,276,702 to 4,276,788 _04078 MPMX20_04079: MPMX20_04079 - Protein-export membrane protein SecG, at 4,276,798 to 4,277,130 _04079 MPMX20_04080: MPMX20_04080 - Phosphoglucosamine mutase, at 4,277,354 to 4,278,691 _04080 Position (kb) 4275 4276 4277Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 4274.364 kb on - strand, within MPMX20_04075at 4274.627 kb on - strandat 4274.787 kb on - strandat 4275.009 kb on + strandat 4275.028 kb on + strandat 4275.038 kb on + strandat 4275.082 kb on - strandat 4275.164 kb on - strandat 4275.220 kb on + strandat 4275.259 kb on - strandat 4275.261 kb on - strandat 4275.263 kb on + strandat 4275.271 kb on - strandat 4275.271 kb on - strandat 4275.271 kb on - strandat 4275.271 kb on - strandat 4275.271 kb on - strandat 4275.273 kb on + strandat 4275.273 kb on + strandat 4275.273 kb on + strandat 4275.273 kb on + strandat 4275.273 kb on + strandat 4275.273 kb on + strandat 4275.281 kb on - strandat 4275.293 kb on - strandat 4275.306 kb on + strandat 4275.314 kb on - strandat 4275.337 kb on - strand, within MPMX20_04077at 4275.383 kb on - strand, within MPMX20_04077at 4275.407 kb on + strand, within MPMX20_04077at 4275.439 kb on + strand, within MPMX20_04077at 4275.442 kb on + strand, within MPMX20_04077at 4275.455 kb on - strand, within MPMX20_04077at 4275.467 kb on - strand, within MPMX20_04077at 4275.499 kb on + strand, within MPMX20_04077at 4275.521 kb on + strand, within MPMX20_04077at 4275.521 kb on + strand, within MPMX20_04077at 4275.521 kb on + strand, within MPMX20_04077at 4275.521 kb on + strand, within MPMX20_04077at 4275.526 kb on + strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.529 kb on - strand, within MPMX20_04077at 4275.561 kb on + strand, within MPMX20_04077at 4275.561 kb on + strand, within MPMX20_04077at 4275.569 kb on - strand, within MPMX20_04077at 4275.569 kb on - strand, within MPMX20_04077at 4275.640 kb on - strand, within MPMX20_04077at 4275.655 kb on - strand, within MPMX20_04077at 4275.733 kb on + strand, within MPMX20_04077at 4275.799 kb on + strand, within MPMX20_04077at 4275.934 kb on - strand, within MPMX20_04077at 4275.980 kb on - strand, within MPMX20_04077at 4276.008 kb on + strand, within MPMX20_04077at 4276.076 kb on + strand, within MPMX20_04077at 4276.084 kb on + strand, within MPMX20_04077at 4276.144 kb on - strand, within MPMX20_04077at 4276.152 kb on + strand, within MPMX20_04077at 4276.185 kb on - strand, within MPMX20_04077at 4276.193 kb on - strand, within MPMX20_04077at 4276.211 kb on + strand, within MPMX20_04077at 4276.221 kb on + strand, within MPMX20_04077at 4276.221 kb on + strand, within MPMX20_04077at 4276.271 kb on + strand, within MPMX20_04077at 4276.352 kb on - strand, within MPMX20_04077at 4276.470 kb on + strandat 4276.511 kb on - strandat 4276.523 kb on + strandat 4276.795 kb on - strandat 4276.797 kb on - strandat 4277.027 kb on - strand, within MPMX20_04079at 4277.074 kb on - strand, within MPMX20_04079at 4277.267 kb on - strandat 4277.369 kb on - strandat 4277.384 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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4,274,364 - MPMX20_04075 0.44 +0.0
4,274,627 - +0.7
4,274,787 - -0.2
4,275,009 + -1.1
4,275,028 + +1.5
4,275,038 + +0.3
4,275,082 - -0.3
4,275,164 - -3.5
4,275,220 + -5.2
4,275,259 - -3.7
4,275,261 - -4.4
4,275,263 + -3.9
4,275,271 - -1.4
4,275,271 - -3.8
4,275,271 - -1.6
4,275,271 - -4.1
4,275,271 - -4.9
4,275,273 + -2.9
4,275,273 + -1.8
4,275,273 + -2.8
4,275,273 + -3.6
4,275,273 + -4.0
4,275,273 + -4.2
4,275,281 - -1.5
4,275,293 - -2.3
4,275,306 + -4.2
4,275,314 - -2.9
4,275,337 - MPMX20_04077 0.11 -4.1
4,275,383 - MPMX20_04077 0.14 -3.0
4,275,407 + MPMX20_04077 0.16 -2.7
4,275,439 + MPMX20_04077 0.18 -4.6
4,275,442 + MPMX20_04077 0.19 -1.2
4,275,455 - MPMX20_04077 0.20 -5.6
4,275,467 - MPMX20_04077 0.21 -1.2
4,275,499 + MPMX20_04077 0.23 -2.8
4,275,521 + MPMX20_04077 0.25 -3.1
4,275,521 + MPMX20_04077 0.25 -3.8
4,275,521 + MPMX20_04077 0.25 -4.6
4,275,521 + MPMX20_04077 0.25 -3.1
4,275,526 + MPMX20_04077 0.25 -4.3
4,275,529 - MPMX20_04077 0.25 -3.3
4,275,529 - MPMX20_04077 0.25 -4.0
4,275,529 - MPMX20_04077 0.25 -4.3
4,275,529 - MPMX20_04077 0.25 -4.1
4,275,529 - MPMX20_04077 0.25 -3.8
4,275,529 - MPMX20_04077 0.25 -1.6
4,275,529 - MPMX20_04077 0.25 -3.3
4,275,561 + MPMX20_04077 0.28 -4.3
4,275,561 + MPMX20_04077 0.28 -4.6
4,275,569 - MPMX20_04077 0.28 -5.0
4,275,569 - MPMX20_04077 0.28 -0.2
4,275,640 - MPMX20_04077 0.33 -4.2
4,275,655 - MPMX20_04077 0.35 -4.2
4,275,733 + MPMX20_04077 0.40 -3.5
4,275,799 + MPMX20_04077 0.45 -1.0
4,275,934 - MPMX20_04077 0.55 -1.4
4,275,980 - MPMX20_04077 0.59 -0.2
4,276,008 + MPMX20_04077 0.61 -4.6
4,276,076 + MPMX20_04077 0.66 -4.6
4,276,084 + MPMX20_04077 0.66 -3.9
4,276,144 - MPMX20_04077 0.71 -2.4
4,276,152 + MPMX20_04077 0.71 -2.3
4,276,185 - MPMX20_04077 0.74 -1.9
4,276,193 - MPMX20_04077 0.74 -3.1
4,276,211 + MPMX20_04077 0.76 -2.7
4,276,221 + MPMX20_04077 0.77 -2.4
4,276,221 + MPMX20_04077 0.77 -2.1
4,276,271 + MPMX20_04077 0.80 -5.0
4,276,352 - MPMX20_04077 0.86 -2.0
4,276,470 + -0.2
4,276,511 - -3.5
4,276,523 + +0.1
4,276,795 - +0.4
4,276,797 - -0.1
4,277,027 - MPMX20_04079 0.69 -0.5
4,277,074 - MPMX20_04079 0.83 -0.3
4,277,267 - +0.0
4,277,369 - +0.6
4,277,384 - +0.2

Or see this region's nucleotide sequence