Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03109 and MPMX20_03110 are separated by 136 nucleotides MPMX20_03110 and MPMX20_03111 are separated by 166 nucleotides
MPMX20_03109: MPMX20_03109 - PTS system beta-glucoside-specific EIIBCA component, at 3,263,675 to 3,265,528
_03109
MPMX20_03110: MPMX20_03110 - Cryptic beta-glucoside bgl operon antiterminator, at 3,265,665 to 3,266,498
_03110
MPMX20_03111: MPMX20_03111 - Porin B, at 3,266,665 to 3,268,023
_03111
Position (kb)
3265
3266
3267 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3264.693 kb on - strand, within MPMX20_03109 at 3264.729 kb on + strand, within MPMX20_03109 at 3264.732 kb on + strand, within MPMX20_03109 at 3264.754 kb on - strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.763 kb on + strand, within MPMX20_03109 at 3264.776 kb on - strand, within MPMX20_03109 at 3264.874 kb on + strand, within MPMX20_03109 at 3264.930 kb on + strand, within MPMX20_03109 at 3264.960 kb on + strand, within MPMX20_03109 at 3264.977 kb on + strand, within MPMX20_03109 at 3264.985 kb on - strand, within MPMX20_03109 at 3264.985 kb on - strand, within MPMX20_03109 at 3265.043 kb on - strand, within MPMX20_03109 at 3265.046 kb on - strand, within MPMX20_03109 at 3265.046 kb on - strand, within MPMX20_03109 at 3265.046 kb on - strand, within MPMX20_03109 at 3265.117 kb on - strand, within MPMX20_03109 at 3265.124 kb on - strand, within MPMX20_03109 at 3265.135 kb on - strand, within MPMX20_03109 at 3265.135 kb on - strand, within MPMX20_03109 at 3265.174 kb on + strand, within MPMX20_03109 at 3265.182 kb on - strand, within MPMX20_03109 at 3265.185 kb on + strand, within MPMX20_03109 at 3265.229 kb on + strand, within MPMX20_03109 at 3265.237 kb on - strand, within MPMX20_03109 at 3265.272 kb on - strand, within MPMX20_03109 at 3265.272 kb on - strand, within MPMX20_03109 at 3265.285 kb on + strand, within MPMX20_03109 at 3265.288 kb on - strand, within MPMX20_03109 at 3265.290 kb on + strand, within MPMX20_03109 at 3265.349 kb on - strand at 3265.349 kb on - strand at 3265.376 kb on - strand at 3265.446 kb on + strand at 3265.447 kb on - strand at 3265.454 kb on + strand at 3265.454 kb on + strand at 3265.456 kb on + strand at 3265.456 kb on + strand at 3265.462 kb on + strand at 3265.464 kb on - strand at 3265.472 kb on + strand at 3265.497 kb on + strand at 3265.497 kb on + strand at 3265.507 kb on + strand at 3265.537 kb on + strand at 3265.557 kb on + strand at 3265.561 kb on + strand at 3265.561 kb on + strand at 3265.569 kb on - strand at 3265.569 kb on - strand at 3265.569 kb on - strand at 3265.569 kb on - strand at 3265.631 kb on - strand at 3265.678 kb on + strand at 3265.681 kb on - strand at 3265.688 kb on + strand at 3265.723 kb on + strand at 3265.744 kb on + strand at 3265.752 kb on - strand, within MPMX20_03110 at 3265.787 kb on - strand, within MPMX20_03110 at 3265.818 kb on - strand, within MPMX20_03110 at 3265.910 kb on + strand, within MPMX20_03110 at 3265.934 kb on + strand, within MPMX20_03110 at 3265.935 kb on - strand, within MPMX20_03110 at 3265.942 kb on - strand, within MPMX20_03110 at 3265.949 kb on - strand, within MPMX20_03110 at 3265.959 kb on + strand, within MPMX20_03110 at 3265.964 kb on + strand, within MPMX20_03110 at 3265.980 kb on + strand, within MPMX20_03110 at 3266.007 kb on + strand, within MPMX20_03110 at 3266.028 kb on - strand, within MPMX20_03110 at 3266.044 kb on + strand, within MPMX20_03110 at 3266.065 kb on + strand, within MPMX20_03110 at 3266.067 kb on - strand, within MPMX20_03110 at 3266.073 kb on - strand, within MPMX20_03110 at 3266.102 kb on + strand, within MPMX20_03110 at 3266.115 kb on - strand, within MPMX20_03110 at 3266.115 kb on - strand, within MPMX20_03110 at 3266.115 kb on - strand, within MPMX20_03110 at 3266.117 kb on + strand, within MPMX20_03110 at 3266.125 kb on - strand, within MPMX20_03110 at 3266.125 kb on - strand, within MPMX20_03110 at 3266.125 kb on - strand, within MPMX20_03110 at 3266.125 kb on - strand, within MPMX20_03110 at 3266.130 kb on - strand, within MPMX20_03110 at 3266.148 kb on - strand, within MPMX20_03110 at 3266.194 kb on + strand, within MPMX20_03110 at 3266.202 kb on - strand, within MPMX20_03110 at 3266.207 kb on + strand, within MPMX20_03110 at 3266.215 kb on - strand, within MPMX20_03110 at 3266.218 kb on + strand, within MPMX20_03110 at 3266.260 kb on - strand, within MPMX20_03110 at 3266.273 kb on + strand, within MPMX20_03110 at 3266.282 kb on - strand, within MPMX20_03110 at 3266.299 kb on - strand, within MPMX20_03110 at 3266.300 kb on + strand, within MPMX20_03110 at 3266.339 kb on - strand, within MPMX20_03110 at 3266.374 kb on + strand, within MPMX20_03110 at 3266.377 kb on + strand, within MPMX20_03110 at 3266.382 kb on - strand, within MPMX20_03110 at 3266.387 kb on - strand, within MPMX20_03110 at 3266.409 kb on + strand, within MPMX20_03110 at 3266.416 kb on - strand at 3266.425 kb on + strand at 3266.425 kb on + strand at 3266.425 kb on + strand at 3266.433 kb on - strand at 3266.433 kb on - strand at 3266.435 kb on + strand at 3266.435 kb on + strand at 3266.435 kb on + strand at 3266.441 kb on - strand at 3266.443 kb on - strand at 3266.443 kb on - strand at 3266.443 kb on - strand at 3266.443 kb on - strand at 3266.443 kb on - strand at 3266.443 kb on - strand at 3266.564 kb on + strand at 3266.691 kb on + strand at 3266.765 kb on + strand at 3266.765 kb on + strand at 3266.768 kb on - strand at 3266.773 kb on - strand at 3266.828 kb on - strand, within MPMX20_03111 at 3266.868 kb on - strand, within MPMX20_03111 at 3266.869 kb on + strand, within MPMX20_03111 at 3266.879 kb on + strand, within MPMX20_03111 at 3266.900 kb on - strand, within MPMX20_03111 at 3266.902 kb on + strand, within MPMX20_03111 at 3266.912 kb on + strand, within MPMX20_03111 at 3266.915 kb on - strand, within MPMX20_03111 at 3266.920 kb on - strand, within MPMX20_03111 at 3266.920 kb on - strand, within MPMX20_03111 at 3266.920 kb on - strand, within MPMX20_03111 at 3266.968 kb on + strand, within MPMX20_03111 at 3266.969 kb on - strand, within MPMX20_03111 at 3266.984 kb on + strand, within MPMX20_03111 at 3266.984 kb on + strand, within MPMX20_03111 at 3266.984 kb on + strand, within MPMX20_03111 at 3266.984 kb on + strand, within MPMX20_03111 at 3266.984 kb on + strand, within MPMX20_03111 at 3266.995 kb on - strand, within MPMX20_03111 at 3267.002 kb on - strand, within MPMX20_03111 at 3267.051 kb on - strand, within MPMX20_03111 at 3267.095 kb on - strand, within MPMX20_03111 at 3267.095 kb on - strand, within MPMX20_03111 at 3267.105 kb on - strand, within MPMX20_03111 at 3267.107 kb on + strand, within MPMX20_03111 at 3267.172 kb on - strand, within MPMX20_03111 at 3267.172 kb on - strand, within MPMX20_03111 at 3267.199 kb on + strand, within MPMX20_03111 at 3267.207 kb on - strand, within MPMX20_03111 at 3267.207 kb on - strand, within MPMX20_03111 at 3267.207 kb on - strand, within MPMX20_03111 at 3267.224 kb on - strand, within MPMX20_03111 at 3267.289 kb on + strand, within MPMX20_03111 at 3267.289 kb on + strand, within MPMX20_03111 at 3267.297 kb on - strand, within MPMX20_03111 at 3267.297 kb on - strand, within MPMX20_03111 at 3267.302 kb on - strand, within MPMX20_03111 at 3267.304 kb on + strand, within MPMX20_03111 at 3267.304 kb on + strand, within MPMX20_03111 at 3267.304 kb on + strand, within MPMX20_03111 at 3267.304 kb on + strand, within MPMX20_03111 at 3267.304 kb on + strand, within MPMX20_03111 at 3267.312 kb on - strand, within MPMX20_03111 at 3267.312 kb on - strand, within MPMX20_03111 at 3267.312 kb on - strand, within MPMX20_03111 at 3267.316 kb on + strand, within MPMX20_03111 at 3267.317 kb on - strand, within MPMX20_03111 at 3267.317 kb on - strand, within MPMX20_03111 at 3267.377 kb on - strand, within MPMX20_03111 at 3267.380 kb on + strand, within MPMX20_03111 at 3267.398 kb on - strand, within MPMX20_03111 at 3267.401 kb on + strand, within MPMX20_03111 at 3267.414 kb on - strand, within MPMX20_03111 at 3267.414 kb on - strand, within MPMX20_03111 at 3267.423 kb on + strand, within MPMX20_03111 at 3267.425 kb on + strand, within MPMX20_03111
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 3,264,693 - MPMX20_03109 0.55 -2.2 3,264,729 + MPMX20_03109 0.57 -2.4 3,264,732 + MPMX20_03109 0.57 -2.1 3,264,754 - MPMX20_03109 0.58 -0.9 3,264,763 + MPMX20_03109 0.59 -0.8 3,264,763 + MPMX20_03109 0.59 -2.9 3,264,763 + MPMX20_03109 0.59 -2.4 3,264,763 + MPMX20_03109 0.59 -1.6 3,264,763 + MPMX20_03109 0.59 -3.3 3,264,763 + MPMX20_03109 0.59 -0.9 3,264,763 + MPMX20_03109 0.59 -0.6 3,264,776 - MPMX20_03109 0.59 -3.6 3,264,874 + MPMX20_03109 0.65 -1.2 3,264,930 + MPMX20_03109 0.68 -1.2 3,264,960 + MPMX20_03109 0.69 -3.7 3,264,977 + MPMX20_03109 0.70 -1.4 3,264,985 - MPMX20_03109 0.71 +0.5 3,264,985 - MPMX20_03109 0.71 -3.4 3,265,043 - MPMX20_03109 0.74 -3.9 3,265,046 - MPMX20_03109 0.74 +0.4 3,265,046 - MPMX20_03109 0.74 -4.3 3,265,046 - MPMX20_03109 0.74 -2.5 3,265,117 - MPMX20_03109 0.78 -1.8 3,265,124 - MPMX20_03109 0.78 -3.7 3,265,135 - MPMX20_03109 0.79 -3.8 3,265,135 - MPMX20_03109 0.79 -1.5 3,265,174 + MPMX20_03109 0.81 -2.3 3,265,182 - MPMX20_03109 0.81 -3.4 3,265,185 + MPMX20_03109 0.81 -4.0 3,265,229 + MPMX20_03109 0.84 -1.5 3,265,237 - MPMX20_03109 0.84 -3.4 3,265,272 - MPMX20_03109 0.86 -1.6 3,265,272 - MPMX20_03109 0.86 -2.9 3,265,285 + MPMX20_03109 0.87 -2.7 3,265,288 - MPMX20_03109 0.87 +0.8 3,265,290 + MPMX20_03109 0.87 -4.0 3,265,349 - -0.8 3,265,349 - -3.0 3,265,376 - -5.3 3,265,446 + -3.7 3,265,447 - -3.9 3,265,454 + -1.2 3,265,454 + -3.1 3,265,456 + -2.5 3,265,456 + -3.5 3,265,462 + -2.2 3,265,464 - -2.4 3,265,472 + -1.4 3,265,497 + -3.7 3,265,497 + -3.1 3,265,507 + -1.2 3,265,537 + -3.9 3,265,557 + -0.4 3,265,561 + -4.7 3,265,561 + -0.2 3,265,569 - -1.9 3,265,569 - -1.8 3,265,569 - -1.6 3,265,569 - -2.5 3,265,631 - -0.4 3,265,678 + -4.0 3,265,681 - -1.0 3,265,688 + -1.4 3,265,723 + -3.9 3,265,744 + -4.1 3,265,752 - MPMX20_03110 0.10 -2.5 3,265,787 - MPMX20_03110 0.15 +0.2 3,265,818 - MPMX20_03110 0.18 -2.2 3,265,910 + MPMX20_03110 0.29 -2.2 3,265,934 + MPMX20_03110 0.32 -1.2 3,265,935 - MPMX20_03110 0.32 -2.6 3,265,942 - MPMX20_03110 0.33 -0.2 3,265,949 - MPMX20_03110 0.34 -3.5 3,265,959 + MPMX20_03110 0.35 -2.1 3,265,964 + MPMX20_03110 0.36 -3.0 3,265,980 + MPMX20_03110 0.38 -2.9 3,266,007 + MPMX20_03110 0.41 -3.0 3,266,028 - MPMX20_03110 0.44 -2.4 3,266,044 + MPMX20_03110 0.45 -1.7 3,266,065 + MPMX20_03110 0.48 -2.4 3,266,067 - MPMX20_03110 0.48 -3.3 3,266,073 - MPMX20_03110 0.49 -3.2 3,266,102 + MPMX20_03110 0.52 -1.9 3,266,115 - MPMX20_03110 0.54 -0.2 3,266,115 - MPMX20_03110 0.54 -4.1 3,266,115 - MPMX20_03110 0.54 -1.6 3,266,117 + MPMX20_03110 0.54 -1.8 3,266,125 - MPMX20_03110 0.55 -2.2 3,266,125 - MPMX20_03110 0.55 -1.2 3,266,125 - MPMX20_03110 0.55 -5.3 3,266,125 - MPMX20_03110 0.55 -3.4 3,266,130 - MPMX20_03110 0.56 -1.6 3,266,148 - MPMX20_03110 0.58 -1.9 3,266,194 + MPMX20_03110 0.63 -2.4 3,266,202 - MPMX20_03110 0.64 -2.7 3,266,207 + MPMX20_03110 0.65 -2.2 3,266,215 - MPMX20_03110 0.66 -3.2 3,266,218 + MPMX20_03110 0.66 -2.3 3,266,260 - MPMX20_03110 0.71 -0.2 3,266,273 + MPMX20_03110 0.73 -1.6 3,266,282 - MPMX20_03110 0.74 -3.1 3,266,299 - MPMX20_03110 0.76 -2.3 3,266,300 + MPMX20_03110 0.76 -2.1 3,266,339 - MPMX20_03110 0.81 -3.9 3,266,374 + MPMX20_03110 0.85 -1.4 3,266,377 + MPMX20_03110 0.85 -0.2 3,266,382 - MPMX20_03110 0.86 -2.1 3,266,387 - MPMX20_03110 0.87 -0.6 3,266,409 + MPMX20_03110 0.89 -1.8 3,266,416 - -2.1 3,266,425 + -3.2 3,266,425 + -4.0 3,266,425 + -1.8 3,266,433 - -1.3 3,266,433 - -4.0 3,266,435 + -2.2 3,266,435 + -1.7 3,266,435 + -2.4 3,266,441 - -2.9 3,266,443 - -1.7 3,266,443 - -1.6 3,266,443 - -2.0 3,266,443 - -0.3 3,266,443 - -2.1 3,266,443 - -2.7 3,266,564 + -1.4 3,266,691 + -0.5 3,266,765 + +0.1 3,266,765 + -0.5 3,266,768 - -0.7 3,266,773 - -1.1 3,266,828 - MPMX20_03111 0.12 -0.4 3,266,868 - MPMX20_03111 0.15 -3.0 3,266,869 + MPMX20_03111 0.15 -0.1 3,266,879 + MPMX20_03111 0.16 +0.7 3,266,900 - MPMX20_03111 0.17 -2.1 3,266,902 + MPMX20_03111 0.17 +0.7 3,266,912 + MPMX20_03111 0.18 +0.2 3,266,915 - MPMX20_03111 0.18 -0.6 3,266,920 - MPMX20_03111 0.19 -0.2 3,266,920 - MPMX20_03111 0.19 -2.5 3,266,920 - MPMX20_03111 0.19 +0.9 3,266,968 + MPMX20_03111 0.22 +0.1 3,266,969 - MPMX20_03111 0.22 -0.5 3,266,984 + MPMX20_03111 0.23 +0.5 3,266,984 + MPMX20_03111 0.23 +1.0 3,266,984 + MPMX20_03111 0.23 +0.4 3,266,984 + MPMX20_03111 0.23 -2.1 3,266,984 + MPMX20_03111 0.23 -0.9 3,266,995 - MPMX20_03111 0.24 +0.2 3,267,002 - MPMX20_03111 0.25 -1.1 3,267,051 - MPMX20_03111 0.28 -1.4 3,267,095 - MPMX20_03111 0.32 -1.1 3,267,095 - MPMX20_03111 0.32 +0.1 3,267,105 - MPMX20_03111 0.32 -1.2 3,267,107 + MPMX20_03111 0.33 -0.9 3,267,172 - MPMX20_03111 0.37 -1.5 3,267,172 - MPMX20_03111 0.37 -0.6 3,267,199 + MPMX20_03111 0.39 -0.5 3,267,207 - MPMX20_03111 0.40 -1.5 3,267,207 - MPMX20_03111 0.40 -0.9 3,267,207 - MPMX20_03111 0.40 +0.1 3,267,224 - MPMX20_03111 0.41 -1.1 3,267,289 + MPMX20_03111 0.46 -0.3 3,267,289 + MPMX20_03111 0.46 -1.8 3,267,297 - MPMX20_03111 0.47 -1.6 3,267,297 - MPMX20_03111 0.47 +0.2 3,267,302 - MPMX20_03111 0.47 -0.3 3,267,304 + MPMX20_03111 0.47 -0.7 3,267,304 + MPMX20_03111 0.47 -0.7 3,267,304 + MPMX20_03111 0.47 -1.1 3,267,304 + MPMX20_03111 0.47 +0.2 3,267,304 + MPMX20_03111 0.47 -1.3 3,267,312 - MPMX20_03111 0.48 -1.3 3,267,312 - MPMX20_03111 0.48 -2.5 3,267,312 - MPMX20_03111 0.48 -2.7 3,267,316 + MPMX20_03111 0.48 -0.6 3,267,317 - MPMX20_03111 0.48 +0.2 3,267,317 - MPMX20_03111 0.48 -0.7 3,267,377 - MPMX20_03111 0.52 -0.6 3,267,380 + MPMX20_03111 0.53 -0.8 3,267,398 - MPMX20_03111 0.54 -1.0 3,267,401 + MPMX20_03111 0.54 +0.4 3,267,414 - MPMX20_03111 0.55 -2.1 3,267,414 - MPMX20_03111 0.55 -1.8 3,267,423 + MPMX20_03111 0.56 +1.7 3,267,425 + MPMX20_03111 0.56 -0.9
Or see this region's nucleotide sequence