Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03110

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03109 and MPMX20_03110 are separated by 136 nucleotidesMPMX20_03110 and MPMX20_03111 are separated by 166 nucleotides MPMX20_03109: MPMX20_03109 - PTS system beta-glucoside-specific EIIBCA component, at 3,263,675 to 3,265,528 _03109 MPMX20_03110: MPMX20_03110 - Cryptic beta-glucoside bgl operon antiterminator, at 3,265,665 to 3,266,498 _03110 MPMX20_03111: MPMX20_03111 - Porin B, at 3,266,665 to 3,268,023 _03111 Position (kb) 3265 3266 3267Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3264.693 kb on - strand, within MPMX20_03109at 3264.729 kb on + strand, within MPMX20_03109at 3264.732 kb on + strand, within MPMX20_03109at 3264.754 kb on - strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.763 kb on + strand, within MPMX20_03109at 3264.776 kb on - strand, within MPMX20_03109at 3264.874 kb on + strand, within MPMX20_03109at 3264.930 kb on + strand, within MPMX20_03109at 3264.960 kb on + strand, within MPMX20_03109at 3264.977 kb on + strand, within MPMX20_03109at 3264.985 kb on - strand, within MPMX20_03109at 3264.985 kb on - strand, within MPMX20_03109at 3265.043 kb on - strand, within MPMX20_03109at 3265.046 kb on - strand, within MPMX20_03109at 3265.046 kb on - strand, within MPMX20_03109at 3265.046 kb on - strand, within MPMX20_03109at 3265.117 kb on - strand, within MPMX20_03109at 3265.124 kb on - strand, within MPMX20_03109at 3265.135 kb on - strand, within MPMX20_03109at 3265.135 kb on - strand, within MPMX20_03109at 3265.174 kb on + strand, within MPMX20_03109at 3265.182 kb on - strand, within MPMX20_03109at 3265.185 kb on + strand, within MPMX20_03109at 3265.229 kb on + strand, within MPMX20_03109at 3265.237 kb on - strand, within MPMX20_03109at 3265.272 kb on - strand, within MPMX20_03109at 3265.272 kb on - strand, within MPMX20_03109at 3265.285 kb on + strand, within MPMX20_03109at 3265.288 kb on - strand, within MPMX20_03109at 3265.290 kb on + strand, within MPMX20_03109at 3265.349 kb on - strandat 3265.349 kb on - strandat 3265.376 kb on - strandat 3265.446 kb on + strandat 3265.447 kb on - strandat 3265.454 kb on + strandat 3265.454 kb on + strandat 3265.456 kb on + strandat 3265.456 kb on + strandat 3265.462 kb on + strandat 3265.464 kb on - strandat 3265.472 kb on + strandat 3265.497 kb on + strandat 3265.497 kb on + strandat 3265.507 kb on + strandat 3265.537 kb on + strandat 3265.557 kb on + strandat 3265.561 kb on + strandat 3265.561 kb on + strandat 3265.569 kb on - strandat 3265.569 kb on - strandat 3265.569 kb on - strandat 3265.569 kb on - strandat 3265.631 kb on - strandat 3265.678 kb on + strandat 3265.681 kb on - strandat 3265.688 kb on + strandat 3265.723 kb on + strandat 3265.744 kb on + strandat 3265.752 kb on - strand, within MPMX20_03110at 3265.787 kb on - strand, within MPMX20_03110at 3265.818 kb on - strand, within MPMX20_03110at 3265.910 kb on + strand, within MPMX20_03110at 3265.934 kb on + strand, within MPMX20_03110at 3265.935 kb on - strand, within MPMX20_03110at 3265.942 kb on - strand, within MPMX20_03110at 3265.949 kb on - strand, within MPMX20_03110at 3265.959 kb on + strand, within MPMX20_03110at 3265.964 kb on + strand, within MPMX20_03110at 3265.980 kb on + strand, within MPMX20_03110at 3266.007 kb on + strand, within MPMX20_03110at 3266.028 kb on - strand, within MPMX20_03110at 3266.044 kb on + strand, within MPMX20_03110at 3266.065 kb on + strand, within MPMX20_03110at 3266.067 kb on - strand, within MPMX20_03110at 3266.073 kb on - strand, within MPMX20_03110at 3266.102 kb on + strand, within MPMX20_03110at 3266.115 kb on - strand, within MPMX20_03110at 3266.115 kb on - strand, within MPMX20_03110at 3266.115 kb on - strand, within MPMX20_03110at 3266.117 kb on + strand, within MPMX20_03110at 3266.125 kb on - strand, within MPMX20_03110at 3266.125 kb on - strand, within MPMX20_03110at 3266.125 kb on - strand, within MPMX20_03110at 3266.125 kb on - strand, within MPMX20_03110at 3266.130 kb on - strand, within MPMX20_03110at 3266.148 kb on - strand, within MPMX20_03110at 3266.194 kb on + strand, within MPMX20_03110at 3266.202 kb on - strand, within MPMX20_03110at 3266.207 kb on + strand, within MPMX20_03110at 3266.215 kb on - strand, within MPMX20_03110at 3266.218 kb on + strand, within MPMX20_03110at 3266.260 kb on - strand, within MPMX20_03110at 3266.273 kb on + strand, within MPMX20_03110at 3266.282 kb on - strand, within MPMX20_03110at 3266.299 kb on - strand, within MPMX20_03110at 3266.300 kb on + strand, within MPMX20_03110at 3266.339 kb on - strand, within MPMX20_03110at 3266.374 kb on + strand, within MPMX20_03110at 3266.377 kb on + strand, within MPMX20_03110at 3266.382 kb on - strand, within MPMX20_03110at 3266.387 kb on - strand, within MPMX20_03110at 3266.409 kb on + strand, within MPMX20_03110at 3266.416 kb on - strandat 3266.425 kb on + strandat 3266.425 kb on + strandat 3266.425 kb on + strandat 3266.433 kb on - strandat 3266.433 kb on - strandat 3266.435 kb on + strandat 3266.435 kb on + strandat 3266.435 kb on + strandat 3266.441 kb on - strandat 3266.443 kb on - strandat 3266.443 kb on - strandat 3266.443 kb on - strandat 3266.443 kb on - strandat 3266.443 kb on - strandat 3266.443 kb on - strandat 3266.564 kb on + strandat 3266.691 kb on + strandat 3266.765 kb on + strandat 3266.765 kb on + strandat 3266.768 kb on - strandat 3266.773 kb on - strandat 3266.828 kb on - strand, within MPMX20_03111at 3266.868 kb on - strand, within MPMX20_03111at 3266.869 kb on + strand, within MPMX20_03111at 3266.879 kb on + strand, within MPMX20_03111at 3266.900 kb on - strand, within MPMX20_03111at 3266.902 kb on + strand, within MPMX20_03111at 3266.912 kb on + strand, within MPMX20_03111at 3266.915 kb on - strand, within MPMX20_03111at 3266.920 kb on - strand, within MPMX20_03111at 3266.920 kb on - strand, within MPMX20_03111at 3266.920 kb on - strand, within MPMX20_03111at 3266.968 kb on + strand, within MPMX20_03111at 3266.969 kb on - strand, within MPMX20_03111at 3266.984 kb on + strand, within MPMX20_03111at 3266.984 kb on + strand, within MPMX20_03111at 3266.984 kb on + strand, within MPMX20_03111at 3266.984 kb on + strand, within MPMX20_03111at 3266.984 kb on + strand, within MPMX20_03111at 3266.995 kb on - strand, within MPMX20_03111at 3267.002 kb on - strand, within MPMX20_03111at 3267.051 kb on - strand, within MPMX20_03111at 3267.095 kb on - strand, within MPMX20_03111at 3267.095 kb on - strand, within MPMX20_03111at 3267.105 kb on - strand, within MPMX20_03111at 3267.107 kb on + strand, within MPMX20_03111at 3267.172 kb on - strand, within MPMX20_03111at 3267.172 kb on - strand, within MPMX20_03111at 3267.199 kb on + strand, within MPMX20_03111at 3267.207 kb on - strand, within MPMX20_03111at 3267.207 kb on - strand, within MPMX20_03111at 3267.207 kb on - strand, within MPMX20_03111at 3267.224 kb on - strand, within MPMX20_03111at 3267.289 kb on + strand, within MPMX20_03111at 3267.289 kb on + strand, within MPMX20_03111at 3267.297 kb on - strand, within MPMX20_03111at 3267.297 kb on - strand, within MPMX20_03111at 3267.302 kb on - strand, within MPMX20_03111at 3267.304 kb on + strand, within MPMX20_03111at 3267.304 kb on + strand, within MPMX20_03111at 3267.304 kb on + strand, within MPMX20_03111at 3267.304 kb on + strand, within MPMX20_03111at 3267.304 kb on + strand, within MPMX20_03111at 3267.312 kb on - strand, within MPMX20_03111at 3267.312 kb on - strand, within MPMX20_03111at 3267.312 kb on - strand, within MPMX20_03111at 3267.316 kb on + strand, within MPMX20_03111at 3267.317 kb on - strand, within MPMX20_03111at 3267.317 kb on - strand, within MPMX20_03111at 3267.377 kb on - strand, within MPMX20_03111at 3267.380 kb on + strand, within MPMX20_03111at 3267.398 kb on - strand, within MPMX20_03111at 3267.401 kb on + strand, within MPMX20_03111at 3267.414 kb on - strand, within MPMX20_03111at 3267.414 kb on - strand, within MPMX20_03111at 3267.423 kb on + strand, within MPMX20_03111at 3267.425 kb on + strand, within MPMX20_03111

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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3,264,693 - MPMX20_03109 0.55 -2.2
3,264,729 + MPMX20_03109 0.57 -2.4
3,264,732 + MPMX20_03109 0.57 -2.1
3,264,754 - MPMX20_03109 0.58 -0.9
3,264,763 + MPMX20_03109 0.59 -0.8
3,264,763 + MPMX20_03109 0.59 -2.9
3,264,763 + MPMX20_03109 0.59 -2.4
3,264,763 + MPMX20_03109 0.59 -1.6
3,264,763 + MPMX20_03109 0.59 -3.3
3,264,763 + MPMX20_03109 0.59 -0.9
3,264,763 + MPMX20_03109 0.59 -0.6
3,264,776 - MPMX20_03109 0.59 -3.6
3,264,874 + MPMX20_03109 0.65 -1.2
3,264,930 + MPMX20_03109 0.68 -1.2
3,264,960 + MPMX20_03109 0.69 -3.7
3,264,977 + MPMX20_03109 0.70 -1.4
3,264,985 - MPMX20_03109 0.71 +0.5
3,264,985 - MPMX20_03109 0.71 -3.4
3,265,043 - MPMX20_03109 0.74 -3.9
3,265,046 - MPMX20_03109 0.74 +0.4
3,265,046 - MPMX20_03109 0.74 -4.3
3,265,046 - MPMX20_03109 0.74 -2.5
3,265,117 - MPMX20_03109 0.78 -1.8
3,265,124 - MPMX20_03109 0.78 -3.7
3,265,135 - MPMX20_03109 0.79 -3.8
3,265,135 - MPMX20_03109 0.79 -1.5
3,265,174 + MPMX20_03109 0.81 -2.3
3,265,182 - MPMX20_03109 0.81 -3.4
3,265,185 + MPMX20_03109 0.81 -4.0
3,265,229 + MPMX20_03109 0.84 -1.5
3,265,237 - MPMX20_03109 0.84 -3.4
3,265,272 - MPMX20_03109 0.86 -1.6
3,265,272 - MPMX20_03109 0.86 -2.9
3,265,285 + MPMX20_03109 0.87 -2.7
3,265,288 - MPMX20_03109 0.87 +0.8
3,265,290 + MPMX20_03109 0.87 -4.0
3,265,349 - -0.8
3,265,349 - -3.0
3,265,376 - -5.3
3,265,446 + -3.7
3,265,447 - -3.9
3,265,454 + -1.2
3,265,454 + -3.1
3,265,456 + -2.5
3,265,456 + -3.5
3,265,462 + -2.2
3,265,464 - -2.4
3,265,472 + -1.4
3,265,497 + -3.7
3,265,497 + -3.1
3,265,507 + -1.2
3,265,537 + -3.9
3,265,557 + -0.4
3,265,561 + -4.7
3,265,561 + -0.2
3,265,569 - -1.9
3,265,569 - -1.8
3,265,569 - -1.6
3,265,569 - -2.5
3,265,631 - -0.4
3,265,678 + -4.0
3,265,681 - -1.0
3,265,688 + -1.4
3,265,723 + -3.9
3,265,744 + -4.1
3,265,752 - MPMX20_03110 0.10 -2.5
3,265,787 - MPMX20_03110 0.15 +0.2
3,265,818 - MPMX20_03110 0.18 -2.2
3,265,910 + MPMX20_03110 0.29 -2.2
3,265,934 + MPMX20_03110 0.32 -1.2
3,265,935 - MPMX20_03110 0.32 -2.6
3,265,942 - MPMX20_03110 0.33 -0.2
3,265,949 - MPMX20_03110 0.34 -3.5
3,265,959 + MPMX20_03110 0.35 -2.1
3,265,964 + MPMX20_03110 0.36 -3.0
3,265,980 + MPMX20_03110 0.38 -2.9
3,266,007 + MPMX20_03110 0.41 -3.0
3,266,028 - MPMX20_03110 0.44 -2.4
3,266,044 + MPMX20_03110 0.45 -1.7
3,266,065 + MPMX20_03110 0.48 -2.4
3,266,067 - MPMX20_03110 0.48 -3.3
3,266,073 - MPMX20_03110 0.49 -3.2
3,266,102 + MPMX20_03110 0.52 -1.9
3,266,115 - MPMX20_03110 0.54 -0.2
3,266,115 - MPMX20_03110 0.54 -4.1
3,266,115 - MPMX20_03110 0.54 -1.6
3,266,117 + MPMX20_03110 0.54 -1.8
3,266,125 - MPMX20_03110 0.55 -2.2
3,266,125 - MPMX20_03110 0.55 -1.2
3,266,125 - MPMX20_03110 0.55 -5.3
3,266,125 - MPMX20_03110 0.55 -3.4
3,266,130 - MPMX20_03110 0.56 -1.6
3,266,148 - MPMX20_03110 0.58 -1.9
3,266,194 + MPMX20_03110 0.63 -2.4
3,266,202 - MPMX20_03110 0.64 -2.7
3,266,207 + MPMX20_03110 0.65 -2.2
3,266,215 - MPMX20_03110 0.66 -3.2
3,266,218 + MPMX20_03110 0.66 -2.3
3,266,260 - MPMX20_03110 0.71 -0.2
3,266,273 + MPMX20_03110 0.73 -1.6
3,266,282 - MPMX20_03110 0.74 -3.1
3,266,299 - MPMX20_03110 0.76 -2.3
3,266,300 + MPMX20_03110 0.76 -2.1
3,266,339 - MPMX20_03110 0.81 -3.9
3,266,374 + MPMX20_03110 0.85 -1.4
3,266,377 + MPMX20_03110 0.85 -0.2
3,266,382 - MPMX20_03110 0.86 -2.1
3,266,387 - MPMX20_03110 0.87 -0.6
3,266,409 + MPMX20_03110 0.89 -1.8
3,266,416 - -2.1
3,266,425 + -3.2
3,266,425 + -4.0
3,266,425 + -1.8
3,266,433 - -1.3
3,266,433 - -4.0
3,266,435 + -2.2
3,266,435 + -1.7
3,266,435 + -2.4
3,266,441 - -2.9
3,266,443 - -1.7
3,266,443 - -1.6
3,266,443 - -2.0
3,266,443 - -0.3
3,266,443 - -2.1
3,266,443 - -2.7
3,266,564 + -1.4
3,266,691 + -0.5
3,266,765 + +0.1
3,266,765 + -0.5
3,266,768 - -0.7
3,266,773 - -1.1
3,266,828 - MPMX20_03111 0.12 -0.4
3,266,868 - MPMX20_03111 0.15 -3.0
3,266,869 + MPMX20_03111 0.15 -0.1
3,266,879 + MPMX20_03111 0.16 +0.7
3,266,900 - MPMX20_03111 0.17 -2.1
3,266,902 + MPMX20_03111 0.17 +0.7
3,266,912 + MPMX20_03111 0.18 +0.2
3,266,915 - MPMX20_03111 0.18 -0.6
3,266,920 - MPMX20_03111 0.19 -0.2
3,266,920 - MPMX20_03111 0.19 -2.5
3,266,920 - MPMX20_03111 0.19 +0.9
3,266,968 + MPMX20_03111 0.22 +0.1
3,266,969 - MPMX20_03111 0.22 -0.5
3,266,984 + MPMX20_03111 0.23 +0.5
3,266,984 + MPMX20_03111 0.23 +1.0
3,266,984 + MPMX20_03111 0.23 +0.4
3,266,984 + MPMX20_03111 0.23 -2.1
3,266,984 + MPMX20_03111 0.23 -0.9
3,266,995 - MPMX20_03111 0.24 +0.2
3,267,002 - MPMX20_03111 0.25 -1.1
3,267,051 - MPMX20_03111 0.28 -1.4
3,267,095 - MPMX20_03111 0.32 -1.1
3,267,095 - MPMX20_03111 0.32 +0.1
3,267,105 - MPMX20_03111 0.32 -1.2
3,267,107 + MPMX20_03111 0.33 -0.9
3,267,172 - MPMX20_03111 0.37 -1.5
3,267,172 - MPMX20_03111 0.37 -0.6
3,267,199 + MPMX20_03111 0.39 -0.5
3,267,207 - MPMX20_03111 0.40 -1.5
3,267,207 - MPMX20_03111 0.40 -0.9
3,267,207 - MPMX20_03111 0.40 +0.1
3,267,224 - MPMX20_03111 0.41 -1.1
3,267,289 + MPMX20_03111 0.46 -0.3
3,267,289 + MPMX20_03111 0.46 -1.8
3,267,297 - MPMX20_03111 0.47 -1.6
3,267,297 - MPMX20_03111 0.47 +0.2
3,267,302 - MPMX20_03111 0.47 -0.3
3,267,304 + MPMX20_03111 0.47 -0.7
3,267,304 + MPMX20_03111 0.47 -0.7
3,267,304 + MPMX20_03111 0.47 -1.1
3,267,304 + MPMX20_03111 0.47 +0.2
3,267,304 + MPMX20_03111 0.47 -1.3
3,267,312 - MPMX20_03111 0.48 -1.3
3,267,312 - MPMX20_03111 0.48 -2.5
3,267,312 - MPMX20_03111 0.48 -2.7
3,267,316 + MPMX20_03111 0.48 -0.6
3,267,317 - MPMX20_03111 0.48 +0.2
3,267,317 - MPMX20_03111 0.48 -0.7
3,267,377 - MPMX20_03111 0.52 -0.6
3,267,380 + MPMX20_03111 0.53 -0.8
3,267,398 - MPMX20_03111 0.54 -1.0
3,267,401 + MPMX20_03111 0.54 +0.4
3,267,414 - MPMX20_03111 0.55 -2.1
3,267,414 - MPMX20_03111 0.55 -1.8
3,267,423 + MPMX20_03111 0.56 +1.7
3,267,425 + MPMX20_03111 0.56 -0.9

Or see this region's nucleotide sequence