Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02572 and MPMX20_02573 are separated by 25 nucleotides MPMX20_02573 and MPMX20_02574 are separated by 52 nucleotides MPMX20_02574 and MPMX20_02575 are separated by 104 nucleotides MPMX20_02575 and MPMX20_02576 are separated by 38 nucleotides
MPMX20_02572: MPMX20_02572 - hypothetical protein, at 2,710,153 to 2,710,557
_02572
MPMX20_02573: MPMX20_02573 - hypothetical protein, at 2,710,583 to 2,711,326
_02573
MPMX20_02574: MPMX20_02574 - putative intracellular septation protein A, at 2,711,379 to 2,711,918
_02574
MPMX20_02575: MPMX20_02575 - putative acyl-CoA thioester hydrolase, at 2,712,023 to 2,712,418
_02575
MPMX20_02576: MPMX20_02576 - Protein TonB, at 2,712,457 to 2,713,200
_02576
Position (kb)
2711
2712 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2710.390 kb on - strand, within MPMX20_02572 at 2710.427 kb on - strand, within MPMX20_02572 at 2710.428 kb on + strand, within MPMX20_02572 at 2710.428 kb on + strand, within MPMX20_02572 at 2710.432 kb on + strand, within MPMX20_02572 at 2710.440 kb on + strand, within MPMX20_02572 at 2710.520 kb on + strand at 2710.525 kb on + strand at 2710.525 kb on + strand at 2710.525 kb on + strand at 2710.525 kb on + strand at 2710.525 kb on + strand at 2710.525 kb on + strand at 2710.533 kb on - strand at 2710.533 kb on - strand at 2710.535 kb on + strand at 2710.535 kb on - strand at 2710.543 kb on - strand at 2710.577 kb on - strand at 2710.579 kb on + strand at 2710.579 kb on + strand at 2710.599 kb on + strand at 2710.639 kb on + strand at 2710.639 kb on + strand at 2710.678 kb on + strand, within MPMX20_02573 at 2710.678 kb on + strand, within MPMX20_02573 at 2710.686 kb on - strand, within MPMX20_02573 at 2710.688 kb on + strand, within MPMX20_02573 at 2710.739 kb on - strand, within MPMX20_02573 at 2710.769 kb on - strand, within MPMX20_02573 at 2710.769 kb on - strand, within MPMX20_02573 at 2710.804 kb on + strand, within MPMX20_02573 at 2710.832 kb on + strand, within MPMX20_02573 at 2710.968 kb on + strand, within MPMX20_02573 at 2710.977 kb on - strand, within MPMX20_02573 at 2711.013 kb on - strand, within MPMX20_02573 at 2711.018 kb on - strand, within MPMX20_02573 at 2711.018 kb on - strand, within MPMX20_02573 at 2711.058 kb on + strand, within MPMX20_02573 at 2711.068 kb on + strand, within MPMX20_02573 at 2711.068 kb on + strand, within MPMX20_02573 at 2711.076 kb on - strand, within MPMX20_02573 at 2711.091 kb on - strand, within MPMX20_02573 at 2711.118 kb on - strand, within MPMX20_02573 at 2711.139 kb on + strand, within MPMX20_02573 at 2711.159 kb on + strand, within MPMX20_02573 at 2711.226 kb on + strand, within MPMX20_02573 at 2711.282 kb on + strand at 2711.287 kb on + strand at 2711.342 kb on + strand at 2711.342 kb on + strand at 2711.352 kb on + strand at 2711.352 kb on + strand at 2711.352 kb on + strand at 2711.355 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.360 kb on - strand at 2711.539 kb on + strand, within MPMX20_02574 at 2711.539 kb on + strand, within MPMX20_02574 at 2711.539 kb on + strand, within MPMX20_02574 at 2711.571 kb on + strand, within MPMX20_02574 at 2711.630 kb on + strand, within MPMX20_02574 at 2711.630 kb on + strand, within MPMX20_02574 at 2711.630 kb on + strand, within MPMX20_02574 at 2711.711 kb on + strand, within MPMX20_02574 at 2711.721 kb on + strand, within MPMX20_02574 at 2711.821 kb on + strand, within MPMX20_02574 at 2711.829 kb on - strand, within MPMX20_02574 at 2711.844 kb on + strand, within MPMX20_02574 at 2711.867 kb on + strand at 2711.875 kb on - strand at 2711.875 kb on - strand at 2711.907 kb on + strand at 2711.912 kb on + strand at 2711.920 kb on - strand at 2711.937 kb on + strand at 2711.937 kb on + strand at 2711.937 kb on - strand at 2711.955 kb on + strand at 2711.955 kb on + strand at 2711.955 kb on + strand at 2711.960 kb on + strand at 2711.960 kb on + strand at 2711.963 kb on - strand at 2711.963 kb on - strand at 2711.992 kb on + strand at 2711.992 kb on + strand at 2711.992 kb on + strand at 2712.000 kb on - strand at 2712.000 kb on - strand at 2712.008 kb on - strand at 2712.021 kb on - strand at 2712.021 kb on - strand at 2712.049 kb on - strand at 2712.049 kb on - strand at 2712.049 kb on - strand at 2712.054 kb on - strand at 2712.064 kb on - strand, within MPMX20_02575 at 2712.142 kb on - strand, within MPMX20_02575 at 2712.192 kb on + strand, within MPMX20_02575 at 2712.208 kb on - strand, within MPMX20_02575 at 2712.219 kb on + strand, within MPMX20_02575 at 2712.227 kb on - strand, within MPMX20_02575 at 2712.258 kb on + strand, within MPMX20_02575 at 2712.258 kb on + strand, within MPMX20_02575 at 2712.285 kb on + strand, within MPMX20_02575 at 2712.292 kb on + strand, within MPMX20_02575 at 2712.327 kb on + strand, within MPMX20_02575 at 2712.337 kb on + strand, within MPMX20_02575 at 2712.337 kb on + strand, within MPMX20_02575 at 2712.345 kb on - strand, within MPMX20_02575 at 2712.374 kb on + strand, within MPMX20_02575 at 2712.389 kb on + strand at 2712.389 kb on + strand at 2712.397 kb on - strand at 2712.397 kb on - strand at 2712.407 kb on + strand at 2712.415 kb on - strand at 2712.415 kb on - strand at 2712.415 kb on - strand at 2712.476 kb on - strand at 2712.481 kb on - strand at 2712.629 kb on - strand, within MPMX20_02576 at 2712.655 kb on + strand, within MPMX20_02576 at 2712.663 kb on - strand, within MPMX20_02576 at 2712.699 kb on + strand, within MPMX20_02576 at 2712.707 kb on - strand, within MPMX20_02576 at 2712.817 kb on + strand, within MPMX20_02576 at 2712.819 kb on + strand, within MPMX20_02576 at 2712.880 kb on + strand, within MPMX20_02576
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 2,710,390 - MPMX20_02572 0.59 +0.3 2,710,427 - MPMX20_02572 0.68 +0.7 2,710,428 + MPMX20_02572 0.68 -0.5 2,710,428 + MPMX20_02572 0.68 +0.5 2,710,432 + MPMX20_02572 0.69 +0.7 2,710,440 + MPMX20_02572 0.71 -0.5 2,710,520 + +0.7 2,710,525 + -0.4 2,710,525 + -0.3 2,710,525 + -0.5 2,710,525 + +0.9 2,710,525 + -1.3 2,710,525 + -0.0 2,710,533 - -0.9 2,710,533 - -0.1 2,710,535 + -0.7 2,710,535 - +0.7 2,710,543 - +1.9 2,710,577 - +0.7 2,710,579 + -0.5 2,710,579 + +0.3 2,710,599 + +1.2 2,710,639 + +0.8 2,710,639 + +1.1 2,710,678 + MPMX20_02573 0.13 +0.3 2,710,678 + MPMX20_02573 0.13 +0.0 2,710,686 - MPMX20_02573 0.14 +0.6 2,710,688 + MPMX20_02573 0.14 +0.5 2,710,739 - MPMX20_02573 0.21 -2.5 2,710,769 - MPMX20_02573 0.25 -1.1 2,710,769 - MPMX20_02573 0.25 -0.3 2,710,804 + MPMX20_02573 0.30 -0.2 2,710,832 + MPMX20_02573 0.33 +0.2 2,710,968 + MPMX20_02573 0.52 -1.0 2,710,977 - MPMX20_02573 0.53 -1.1 2,711,013 - MPMX20_02573 0.58 -1.1 2,711,018 - MPMX20_02573 0.58 +1.0 2,711,018 - MPMX20_02573 0.58 +1.3 2,711,058 + MPMX20_02573 0.64 +1.3 2,711,068 + MPMX20_02573 0.65 -0.4 2,711,068 + MPMX20_02573 0.65 +0.5 2,711,076 - MPMX20_02573 0.66 -1.5 2,711,091 - MPMX20_02573 0.68 -1.4 2,711,118 - MPMX20_02573 0.72 -0.8 2,711,139 + MPMX20_02573 0.75 +0.5 2,711,159 + MPMX20_02573 0.77 +1.0 2,711,226 + MPMX20_02573 0.86 +0.6 2,711,282 + -0.1 2,711,287 + -0.7 2,711,342 + +0.3 2,711,342 + -0.5 2,711,352 + -0.7 2,711,352 + -2.3 2,711,352 + -0.4 2,711,355 - -2.3 2,711,360 - -1.8 2,711,360 - -1.7 2,711,360 - -0.3 2,711,360 - -0.3 2,711,360 - +1.0 2,711,360 - +0.8 2,711,360 - -2.3 2,711,360 - -0.8 2,711,360 - -0.1 2,711,539 + MPMX20_02574 0.30 -1.3 2,711,539 + MPMX20_02574 0.30 -2.0 2,711,539 + MPMX20_02574 0.30 -1.3 2,711,571 + MPMX20_02574 0.36 -1.3 2,711,630 + MPMX20_02574 0.46 -1.3 2,711,630 + MPMX20_02574 0.46 -2.4 2,711,630 + MPMX20_02574 0.46 -2.4 2,711,711 + MPMX20_02574 0.61 -2.7 2,711,721 + MPMX20_02574 0.63 -1.8 2,711,821 + MPMX20_02574 0.82 -2.1 2,711,829 - MPMX20_02574 0.83 -1.8 2,711,844 + MPMX20_02574 0.86 -1.7 2,711,867 + -2.1 2,711,875 - -3.5 2,711,875 - -3.5 2,711,907 + -1.8 2,711,912 + +0.7 2,711,920 - -1.3 2,711,937 + -1.2 2,711,937 + +0.8 2,711,937 - +1.3 2,711,955 + +0.3 2,711,955 + -1.6 2,711,955 + +0.3 2,711,960 + -0.8 2,711,960 + -0.5 2,711,963 - -1.6 2,711,963 - +0.5 2,711,992 + -0.8 2,711,992 + -0.0 2,711,992 + +1.9 2,712,000 - +0.3 2,712,000 - +2.1 2,712,008 - -0.4 2,712,021 - +0.0 2,712,021 - -2.0 2,712,049 - -1.1 2,712,049 - +1.6 2,712,049 - -0.1 2,712,054 - -2.5 2,712,064 - MPMX20_02575 0.10 -0.2 2,712,142 - MPMX20_02575 0.30 +0.4 2,712,192 + MPMX20_02575 0.43 +2.0 2,712,208 - MPMX20_02575 0.47 -1.3 2,712,219 + MPMX20_02575 0.49 +0.2 2,712,227 - MPMX20_02575 0.52 -0.6 2,712,258 + MPMX20_02575 0.59 +0.7 2,712,258 + MPMX20_02575 0.59 +0.0 2,712,285 + MPMX20_02575 0.66 -1.3 2,712,292 + MPMX20_02575 0.68 +1.6 2,712,327 + MPMX20_02575 0.77 +0.0 2,712,337 + MPMX20_02575 0.79 -0.0 2,712,337 + MPMX20_02575 0.79 +0.7 2,712,345 - MPMX20_02575 0.81 -1.5 2,712,374 + MPMX20_02575 0.89 -0.2 2,712,389 + +0.0 2,712,389 + +0.4 2,712,397 - -0.5 2,712,397 - +0.0 2,712,407 + +0.4 2,712,415 - -0.7 2,712,415 - -0.3 2,712,415 - -0.4 2,712,476 - -0.1 2,712,481 - -0.2 2,712,629 - MPMX20_02576 0.23 +0.7 2,712,655 + MPMX20_02576 0.27 +0.0 2,712,663 - MPMX20_02576 0.28 -0.5 2,712,699 + MPMX20_02576 0.33 +0.3 2,712,707 - MPMX20_02576 0.34 -0.4 2,712,817 + MPMX20_02576 0.48 +0.8 2,712,819 + MPMX20_02576 0.49 -0.6 2,712,880 + MPMX20_02576 0.57 -1.8
Or see this region's nucleotide sequence