Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02574

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02572 and MPMX20_02573 are separated by 25 nucleotidesMPMX20_02573 and MPMX20_02574 are separated by 52 nucleotidesMPMX20_02574 and MPMX20_02575 are separated by 104 nucleotidesMPMX20_02575 and MPMX20_02576 are separated by 38 nucleotides MPMX20_02572: MPMX20_02572 - hypothetical protein, at 2,710,153 to 2,710,557 _02572 MPMX20_02573: MPMX20_02573 - hypothetical protein, at 2,710,583 to 2,711,326 _02573 MPMX20_02574: MPMX20_02574 - putative intracellular septation protein A, at 2,711,379 to 2,711,918 _02574 MPMX20_02575: MPMX20_02575 - putative acyl-CoA thioester hydrolase, at 2,712,023 to 2,712,418 _02575 MPMX20_02576: MPMX20_02576 - Protein TonB, at 2,712,457 to 2,713,200 _02576 Position (kb) 2711 2712Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2710.390 kb on - strand, within MPMX20_02572at 2710.427 kb on - strand, within MPMX20_02572at 2710.428 kb on + strand, within MPMX20_02572at 2710.428 kb on + strand, within MPMX20_02572at 2710.432 kb on + strand, within MPMX20_02572at 2710.440 kb on + strand, within MPMX20_02572at 2710.520 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.533 kb on - strandat 2710.533 kb on - strandat 2710.535 kb on + strandat 2710.535 kb on - strandat 2710.543 kb on - strandat 2710.577 kb on - strandat 2710.579 kb on + strandat 2710.579 kb on + strandat 2710.599 kb on + strandat 2710.639 kb on + strandat 2710.639 kb on + strandat 2710.678 kb on + strand, within MPMX20_02573at 2710.678 kb on + strand, within MPMX20_02573at 2710.686 kb on - strand, within MPMX20_02573at 2710.688 kb on + strand, within MPMX20_02573at 2710.739 kb on - strand, within MPMX20_02573at 2710.769 kb on - strand, within MPMX20_02573at 2710.769 kb on - strand, within MPMX20_02573at 2710.804 kb on + strand, within MPMX20_02573at 2710.832 kb on + strand, within MPMX20_02573at 2710.968 kb on + strand, within MPMX20_02573at 2710.977 kb on - strand, within MPMX20_02573at 2711.013 kb on - strand, within MPMX20_02573at 2711.018 kb on - strand, within MPMX20_02573at 2711.018 kb on - strand, within MPMX20_02573at 2711.058 kb on + strand, within MPMX20_02573at 2711.068 kb on + strand, within MPMX20_02573at 2711.068 kb on + strand, within MPMX20_02573at 2711.076 kb on - strand, within MPMX20_02573at 2711.091 kb on - strand, within MPMX20_02573at 2711.118 kb on - strand, within MPMX20_02573at 2711.139 kb on + strand, within MPMX20_02573at 2711.159 kb on + strand, within MPMX20_02573at 2711.226 kb on + strand, within MPMX20_02573at 2711.282 kb on + strandat 2711.287 kb on + strandat 2711.342 kb on + strandat 2711.342 kb on + strandat 2711.352 kb on + strandat 2711.352 kb on + strandat 2711.352 kb on + strandat 2711.355 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.360 kb on - strandat 2711.539 kb on + strand, within MPMX20_02574at 2711.539 kb on + strand, within MPMX20_02574at 2711.539 kb on + strand, within MPMX20_02574at 2711.571 kb on + strand, within MPMX20_02574at 2711.630 kb on + strand, within MPMX20_02574at 2711.630 kb on + strand, within MPMX20_02574at 2711.630 kb on + strand, within MPMX20_02574at 2711.711 kb on + strand, within MPMX20_02574at 2711.721 kb on + strand, within MPMX20_02574at 2711.821 kb on + strand, within MPMX20_02574at 2711.829 kb on - strand, within MPMX20_02574at 2711.844 kb on + strand, within MPMX20_02574at 2711.867 kb on + strandat 2711.875 kb on - strandat 2711.875 kb on - strandat 2711.907 kb on + strandat 2711.912 kb on + strandat 2711.920 kb on - strandat 2711.937 kb on + strandat 2711.937 kb on + strandat 2711.937 kb on - strandat 2711.955 kb on + strandat 2711.955 kb on + strandat 2711.955 kb on + strandat 2711.960 kb on + strandat 2711.960 kb on + strandat 2711.963 kb on - strandat 2711.963 kb on - strandat 2711.992 kb on + strandat 2711.992 kb on + strandat 2711.992 kb on + strandat 2712.000 kb on - strandat 2712.000 kb on - strandat 2712.008 kb on - strandat 2712.021 kb on - strandat 2712.021 kb on - strandat 2712.049 kb on - strandat 2712.049 kb on - strandat 2712.049 kb on - strandat 2712.054 kb on - strandat 2712.064 kb on - strand, within MPMX20_02575at 2712.142 kb on - strand, within MPMX20_02575at 2712.192 kb on + strand, within MPMX20_02575at 2712.208 kb on - strand, within MPMX20_02575at 2712.219 kb on + strand, within MPMX20_02575at 2712.227 kb on - strand, within MPMX20_02575at 2712.258 kb on + strand, within MPMX20_02575at 2712.258 kb on + strand, within MPMX20_02575at 2712.285 kb on + strand, within MPMX20_02575at 2712.292 kb on + strand, within MPMX20_02575at 2712.327 kb on + strand, within MPMX20_02575at 2712.337 kb on + strand, within MPMX20_02575at 2712.337 kb on + strand, within MPMX20_02575at 2712.345 kb on - strand, within MPMX20_02575at 2712.374 kb on + strand, within MPMX20_02575at 2712.389 kb on + strandat 2712.389 kb on + strandat 2712.397 kb on - strandat 2712.397 kb on - strandat 2712.407 kb on + strandat 2712.415 kb on - strandat 2712.415 kb on - strandat 2712.415 kb on - strandat 2712.476 kb on - strandat 2712.481 kb on - strandat 2712.629 kb on - strand, within MPMX20_02576at 2712.655 kb on + strand, within MPMX20_02576at 2712.663 kb on - strand, within MPMX20_02576at 2712.699 kb on + strand, within MPMX20_02576at 2712.707 kb on - strand, within MPMX20_02576at 2712.817 kb on + strand, within MPMX20_02576at 2712.819 kb on + strand, within MPMX20_02576at 2712.880 kb on + strand, within MPMX20_02576

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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2,710,390 - MPMX20_02572 0.59 +0.3
2,710,427 - MPMX20_02572 0.68 +0.7
2,710,428 + MPMX20_02572 0.68 -0.5
2,710,428 + MPMX20_02572 0.68 +0.5
2,710,432 + MPMX20_02572 0.69 +0.7
2,710,440 + MPMX20_02572 0.71 -0.5
2,710,520 + +0.7
2,710,525 + -0.4
2,710,525 + -0.3
2,710,525 + -0.5
2,710,525 + +0.9
2,710,525 + -1.3
2,710,525 + -0.0
2,710,533 - -0.9
2,710,533 - -0.1
2,710,535 + -0.7
2,710,535 - +0.7
2,710,543 - +1.9
2,710,577 - +0.7
2,710,579 + -0.5
2,710,579 + +0.3
2,710,599 + +1.2
2,710,639 + +0.8
2,710,639 + +1.1
2,710,678 + MPMX20_02573 0.13 +0.3
2,710,678 + MPMX20_02573 0.13 +0.0
2,710,686 - MPMX20_02573 0.14 +0.6
2,710,688 + MPMX20_02573 0.14 +0.5
2,710,739 - MPMX20_02573 0.21 -2.5
2,710,769 - MPMX20_02573 0.25 -1.1
2,710,769 - MPMX20_02573 0.25 -0.3
2,710,804 + MPMX20_02573 0.30 -0.2
2,710,832 + MPMX20_02573 0.33 +0.2
2,710,968 + MPMX20_02573 0.52 -1.0
2,710,977 - MPMX20_02573 0.53 -1.1
2,711,013 - MPMX20_02573 0.58 -1.1
2,711,018 - MPMX20_02573 0.58 +1.0
2,711,018 - MPMX20_02573 0.58 +1.3
2,711,058 + MPMX20_02573 0.64 +1.3
2,711,068 + MPMX20_02573 0.65 -0.4
2,711,068 + MPMX20_02573 0.65 +0.5
2,711,076 - MPMX20_02573 0.66 -1.5
2,711,091 - MPMX20_02573 0.68 -1.4
2,711,118 - MPMX20_02573 0.72 -0.8
2,711,139 + MPMX20_02573 0.75 +0.5
2,711,159 + MPMX20_02573 0.77 +1.0
2,711,226 + MPMX20_02573 0.86 +0.6
2,711,282 + -0.1
2,711,287 + -0.7
2,711,342 + +0.3
2,711,342 + -0.5
2,711,352 + -0.7
2,711,352 + -2.3
2,711,352 + -0.4
2,711,355 - -2.3
2,711,360 - -1.8
2,711,360 - -1.7
2,711,360 - -0.3
2,711,360 - -0.3
2,711,360 - +1.0
2,711,360 - +0.8
2,711,360 - -2.3
2,711,360 - -0.8
2,711,360 - -0.1
2,711,539 + MPMX20_02574 0.30 -1.3
2,711,539 + MPMX20_02574 0.30 -2.0
2,711,539 + MPMX20_02574 0.30 -1.3
2,711,571 + MPMX20_02574 0.36 -1.3
2,711,630 + MPMX20_02574 0.46 -1.3
2,711,630 + MPMX20_02574 0.46 -2.4
2,711,630 + MPMX20_02574 0.46 -2.4
2,711,711 + MPMX20_02574 0.61 -2.7
2,711,721 + MPMX20_02574 0.63 -1.8
2,711,821 + MPMX20_02574 0.82 -2.1
2,711,829 - MPMX20_02574 0.83 -1.8
2,711,844 + MPMX20_02574 0.86 -1.7
2,711,867 + -2.1
2,711,875 - -3.5
2,711,875 - -3.5
2,711,907 + -1.8
2,711,912 + +0.7
2,711,920 - -1.3
2,711,937 + -1.2
2,711,937 + +0.8
2,711,937 - +1.3
2,711,955 + +0.3
2,711,955 + -1.6
2,711,955 + +0.3
2,711,960 + -0.8
2,711,960 + -0.5
2,711,963 - -1.6
2,711,963 - +0.5
2,711,992 + -0.8
2,711,992 + -0.0
2,711,992 + +1.9
2,712,000 - +0.3
2,712,000 - +2.1
2,712,008 - -0.4
2,712,021 - +0.0
2,712,021 - -2.0
2,712,049 - -1.1
2,712,049 - +1.6
2,712,049 - -0.1
2,712,054 - -2.5
2,712,064 - MPMX20_02575 0.10 -0.2
2,712,142 - MPMX20_02575 0.30 +0.4
2,712,192 + MPMX20_02575 0.43 +2.0
2,712,208 - MPMX20_02575 0.47 -1.3
2,712,219 + MPMX20_02575 0.49 +0.2
2,712,227 - MPMX20_02575 0.52 -0.6
2,712,258 + MPMX20_02575 0.59 +0.7
2,712,258 + MPMX20_02575 0.59 +0.0
2,712,285 + MPMX20_02575 0.66 -1.3
2,712,292 + MPMX20_02575 0.68 +1.6
2,712,327 + MPMX20_02575 0.77 +0.0
2,712,337 + MPMX20_02575 0.79 -0.0
2,712,337 + MPMX20_02575 0.79 +0.7
2,712,345 - MPMX20_02575 0.81 -1.5
2,712,374 + MPMX20_02575 0.89 -0.2
2,712,389 + +0.0
2,712,389 + +0.4
2,712,397 - -0.5
2,712,397 - +0.0
2,712,407 + +0.4
2,712,415 - -0.7
2,712,415 - -0.3
2,712,415 - -0.4
2,712,476 - -0.1
2,712,481 - -0.2
2,712,629 - MPMX20_02576 0.23 +0.7
2,712,655 + MPMX20_02576 0.27 +0.0
2,712,663 - MPMX20_02576 0.28 -0.5
2,712,699 + MPMX20_02576 0.33 +0.3
2,712,707 - MPMX20_02576 0.34 -0.4
2,712,817 + MPMX20_02576 0.48 +0.8
2,712,819 + MPMX20_02576 0.49 -0.6
2,712,880 + MPMX20_02576 0.57 -1.8

Or see this region's nucleotide sequence