Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01365 and MPMX20_01366 overlap by 4 nucleotides MPMX20_01366 and MPMX20_01367 are separated by 3 nucleotides MPMX20_01367 and MPMX20_01368 are separated by 28 nucleotides
MPMX20_01365: MPMX20_01365 - Acyl-CoA thioester hydrolase YbgC, at 1,432,899 to 1,433,303
_01365
MPMX20_01366: MPMX20_01366 - Tol-Pal system protein TolQ, at 1,433,300 to 1,433,992
_01366
MPMX20_01367: MPMX20_01367 - Tol-Pal system protein TolR, at 1,433,996 to 1,434,424
_01367
MPMX20_01368: MPMX20_01368 - hypothetical protein, at 1,434,453 to 1,435,742
_01368
Position (kb)
1433
1434
1435 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1433.008 kb on + strand, within MPMX20_01365 at 1433.045 kb on + strand, within MPMX20_01365 at 1433.053 kb on - strand, within MPMX20_01365 at 1433.064 kb on + strand, within MPMX20_01365 at 1433.161 kb on + strand, within MPMX20_01365 at 1433.213 kb on - strand, within MPMX20_01365 at 1433.236 kb on + strand, within MPMX20_01365 at 1433.244 kb on - strand, within MPMX20_01365 at 1433.244 kb on - strand, within MPMX20_01365 at 1433.297 kb on + strand at 1433.483 kb on - strand, within MPMX20_01366 at 1433.483 kb on - strand, within MPMX20_01366 at 1433.725 kb on + strand, within MPMX20_01366 at 1433.725 kb on + strand, within MPMX20_01366 at 1433.775 kb on - strand, within MPMX20_01366 at 1433.797 kb on - strand, within MPMX20_01366 at 1433.870 kb on + strand, within MPMX20_01366 at 1433.878 kb on - strand, within MPMX20_01366 at 1433.879 kb on + strand, within MPMX20_01366 at 1433.880 kb on + strand, within MPMX20_01366 at 1433.987 kb on + strand at 1433.995 kb on - strand at 1434.041 kb on - strand, within MPMX20_01367 at 1434.108 kb on + strand, within MPMX20_01367 at 1434.197 kb on - strand, within MPMX20_01367 at 1434.204 kb on + strand, within MPMX20_01367 at 1434.209 kb on + strand, within MPMX20_01367 at 1434.209 kb on + strand, within MPMX20_01367 at 1434.209 kb on + strand, within MPMX20_01367 at 1434.209 kb on + strand, within MPMX20_01367 at 1434.209 kb on + strand, within MPMX20_01367 at 1434.217 kb on - strand, within MPMX20_01367 at 1434.217 kb on - strand, within MPMX20_01367 at 1434.217 kb on - strand, within MPMX20_01367 at 1434.217 kb on - strand, within MPMX20_01367 at 1434.217 kb on - strand, within MPMX20_01367 at 1434.250 kb on + strand, within MPMX20_01367 at 1434.265 kb on + strand, within MPMX20_01367 at 1434.265 kb on + strand, within MPMX20_01367 at 1434.287 kb on + strand, within MPMX20_01367 at 1434.370 kb on - strand, within MPMX20_01367 at 1434.490 kb on - strand at 1434.490 kb on - strand at 1434.539 kb on + strand at 1434.678 kb on - strand, within MPMX20_01368 at 1434.726 kb on - strand, within MPMX20_01368 at 1434.765 kb on - strand, within MPMX20_01368 at 1434.861 kb on + strand, within MPMX20_01368 at 1434.912 kb on + strand, within MPMX20_01368 at 1434.985 kb on - strand, within MPMX20_01368 at 1435.161 kb on + strand, within MPMX20_01368 at 1435.370 kb on - strand, within MPMX20_01368
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 1,433,008 + MPMX20_01365 0.27 -0.6 1,433,045 + MPMX20_01365 0.36 -0.2 1,433,053 - MPMX20_01365 0.38 +0.3 1,433,064 + MPMX20_01365 0.41 -0.6 1,433,161 + MPMX20_01365 0.65 +0.2 1,433,213 - MPMX20_01365 0.78 -0.4 1,433,236 + MPMX20_01365 0.83 -0.2 1,433,244 - MPMX20_01365 0.85 -1.5 1,433,244 - MPMX20_01365 0.85 -2.0 1,433,297 + -0.4 1,433,483 - MPMX20_01366 0.26 -3.9 1,433,483 - MPMX20_01366 0.26 -2.4 1,433,725 + MPMX20_01366 0.61 -4.0 1,433,725 + MPMX20_01366 0.61 -1.2 1,433,775 - MPMX20_01366 0.69 -3.7 1,433,797 - MPMX20_01366 0.72 -1.2 1,433,870 + MPMX20_01366 0.82 -5.0 1,433,878 - MPMX20_01366 0.83 -5.7 1,433,879 + MPMX20_01366 0.84 -4.4 1,433,880 + MPMX20_01366 0.84 -1.7 1,433,987 + -0.7 1,433,995 - -0.5 1,434,041 - MPMX20_01367 0.10 -1.2 1,434,108 + MPMX20_01367 0.26 -2.9 1,434,197 - MPMX20_01367 0.47 -3.4 1,434,204 + MPMX20_01367 0.48 -3.7 1,434,209 + MPMX20_01367 0.50 -1.2 1,434,209 + MPMX20_01367 0.50 -4.8 1,434,209 + MPMX20_01367 0.50 -3.3 1,434,209 + MPMX20_01367 0.50 -3.2 1,434,209 + MPMX20_01367 0.50 -3.3 1,434,217 - MPMX20_01367 0.52 -4.0 1,434,217 - MPMX20_01367 0.52 -1.0 1,434,217 - MPMX20_01367 0.52 -1.7 1,434,217 - MPMX20_01367 0.52 -4.2 1,434,217 - MPMX20_01367 0.52 -2.7 1,434,250 + MPMX20_01367 0.59 -1.7 1,434,265 + MPMX20_01367 0.63 -3.7 1,434,265 + MPMX20_01367 0.63 -1.4 1,434,287 + MPMX20_01367 0.68 -3.3 1,434,370 - MPMX20_01367 0.87 -1.9 1,434,490 - -3.0 1,434,490 - -1.3 1,434,539 + -2.7 1,434,678 - MPMX20_01368 0.17 -3.9 1,434,726 - MPMX20_01368 0.21 -3.6 1,434,765 - MPMX20_01368 0.24 -4.8 1,434,861 + MPMX20_01368 0.32 -2.2 1,434,912 + MPMX20_01368 0.36 -3.6 1,434,985 - MPMX20_01368 0.41 -4.4 1,435,161 + MPMX20_01368 0.55 -2.7 1,435,370 - MPMX20_01368 0.71 -5.4
Or see this region's nucleotide sequence