Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01367

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01365 and MPMX20_01366 overlap by 4 nucleotidesMPMX20_01366 and MPMX20_01367 are separated by 3 nucleotidesMPMX20_01367 and MPMX20_01368 are separated by 28 nucleotides MPMX20_01365: MPMX20_01365 - Acyl-CoA thioester hydrolase YbgC, at 1,432,899 to 1,433,303 _01365 MPMX20_01366: MPMX20_01366 - Tol-Pal system protein TolQ, at 1,433,300 to 1,433,992 _01366 MPMX20_01367: MPMX20_01367 - Tol-Pal system protein TolR, at 1,433,996 to 1,434,424 _01367 MPMX20_01368: MPMX20_01368 - hypothetical protein, at 1,434,453 to 1,435,742 _01368 Position (kb) 1433 1434 1435Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1433.008 kb on + strand, within MPMX20_01365at 1433.045 kb on + strand, within MPMX20_01365at 1433.053 kb on - strand, within MPMX20_01365at 1433.064 kb on + strand, within MPMX20_01365at 1433.161 kb on + strand, within MPMX20_01365at 1433.213 kb on - strand, within MPMX20_01365at 1433.236 kb on + strand, within MPMX20_01365at 1433.244 kb on - strand, within MPMX20_01365at 1433.244 kb on - strand, within MPMX20_01365at 1433.297 kb on + strandat 1433.483 kb on - strand, within MPMX20_01366at 1433.483 kb on - strand, within MPMX20_01366at 1433.725 kb on + strand, within MPMX20_01366at 1433.725 kb on + strand, within MPMX20_01366at 1433.775 kb on - strand, within MPMX20_01366at 1433.797 kb on - strand, within MPMX20_01366at 1433.870 kb on + strand, within MPMX20_01366at 1433.878 kb on - strand, within MPMX20_01366at 1433.879 kb on + strand, within MPMX20_01366at 1433.880 kb on + strand, within MPMX20_01366at 1433.987 kb on + strandat 1433.995 kb on - strandat 1434.041 kb on - strand, within MPMX20_01367at 1434.108 kb on + strand, within MPMX20_01367at 1434.197 kb on - strand, within MPMX20_01367at 1434.204 kb on + strand, within MPMX20_01367at 1434.209 kb on + strand, within MPMX20_01367at 1434.209 kb on + strand, within MPMX20_01367at 1434.209 kb on + strand, within MPMX20_01367at 1434.209 kb on + strand, within MPMX20_01367at 1434.209 kb on + strand, within MPMX20_01367at 1434.217 kb on - strand, within MPMX20_01367at 1434.217 kb on - strand, within MPMX20_01367at 1434.217 kb on - strand, within MPMX20_01367at 1434.217 kb on - strand, within MPMX20_01367at 1434.217 kb on - strand, within MPMX20_01367at 1434.250 kb on + strand, within MPMX20_01367at 1434.265 kb on + strand, within MPMX20_01367at 1434.265 kb on + strand, within MPMX20_01367at 1434.287 kb on + strand, within MPMX20_01367at 1434.370 kb on - strand, within MPMX20_01367at 1434.490 kb on - strandat 1434.490 kb on - strandat 1434.539 kb on + strandat 1434.678 kb on - strand, within MPMX20_01368at 1434.726 kb on - strand, within MPMX20_01368at 1434.765 kb on - strand, within MPMX20_01368at 1434.861 kb on + strand, within MPMX20_01368at 1434.912 kb on + strand, within MPMX20_01368at 1434.985 kb on - strand, within MPMX20_01368at 1435.161 kb on + strand, within MPMX20_01368at 1435.370 kb on - strand, within MPMX20_01368

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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1,433,008 + MPMX20_01365 0.27 -0.6
1,433,045 + MPMX20_01365 0.36 -0.2
1,433,053 - MPMX20_01365 0.38 +0.3
1,433,064 + MPMX20_01365 0.41 -0.6
1,433,161 + MPMX20_01365 0.65 +0.2
1,433,213 - MPMX20_01365 0.78 -0.4
1,433,236 + MPMX20_01365 0.83 -0.2
1,433,244 - MPMX20_01365 0.85 -1.5
1,433,244 - MPMX20_01365 0.85 -2.0
1,433,297 + -0.4
1,433,483 - MPMX20_01366 0.26 -3.9
1,433,483 - MPMX20_01366 0.26 -2.4
1,433,725 + MPMX20_01366 0.61 -4.0
1,433,725 + MPMX20_01366 0.61 -1.2
1,433,775 - MPMX20_01366 0.69 -3.7
1,433,797 - MPMX20_01366 0.72 -1.2
1,433,870 + MPMX20_01366 0.82 -5.0
1,433,878 - MPMX20_01366 0.83 -5.7
1,433,879 + MPMX20_01366 0.84 -4.4
1,433,880 + MPMX20_01366 0.84 -1.7
1,433,987 + -0.7
1,433,995 - -0.5
1,434,041 - MPMX20_01367 0.10 -1.2
1,434,108 + MPMX20_01367 0.26 -2.9
1,434,197 - MPMX20_01367 0.47 -3.4
1,434,204 + MPMX20_01367 0.48 -3.7
1,434,209 + MPMX20_01367 0.50 -1.2
1,434,209 + MPMX20_01367 0.50 -4.8
1,434,209 + MPMX20_01367 0.50 -3.3
1,434,209 + MPMX20_01367 0.50 -3.2
1,434,209 + MPMX20_01367 0.50 -3.3
1,434,217 - MPMX20_01367 0.52 -4.0
1,434,217 - MPMX20_01367 0.52 -1.0
1,434,217 - MPMX20_01367 0.52 -1.7
1,434,217 - MPMX20_01367 0.52 -4.2
1,434,217 - MPMX20_01367 0.52 -2.7
1,434,250 + MPMX20_01367 0.59 -1.7
1,434,265 + MPMX20_01367 0.63 -3.7
1,434,265 + MPMX20_01367 0.63 -1.4
1,434,287 + MPMX20_01367 0.68 -3.3
1,434,370 - MPMX20_01367 0.87 -1.9
1,434,490 - -3.0
1,434,490 - -1.3
1,434,539 + -2.7
1,434,678 - MPMX20_01368 0.17 -3.9
1,434,726 - MPMX20_01368 0.21 -3.6
1,434,765 - MPMX20_01368 0.24 -4.8
1,434,861 + MPMX20_01368 0.32 -2.2
1,434,912 + MPMX20_01368 0.36 -3.6
1,434,985 - MPMX20_01368 0.41 -4.4
1,435,161 + MPMX20_01368 0.55 -2.7
1,435,370 - MPMX20_01368 0.71 -5.4

Or see this region's nucleotide sequence