Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00710

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00709 and MPMX20_00710 are separated by 360 nucleotidesMPMX20_00710 and MPMX20_00711 are separated by 1 nucleotidesMPMX20_00711 and MPMX20_00712 are separated by 3 nucleotides MPMX20_00709: MPMX20_00709 - putative tRNA/rRNA methyltransferase, at 730,093 to 730,779 _00709 MPMX20_00710: MPMX20_00710 - Bifunctional aspartokinase/homoserine dehydrogenase 1, at 731,140 to 733,602 _00710 MPMX20_00711: MPMX20_00711 - Homoserine kinase, at 733,604 to 734,533 _00711 MPMX20_00712: MPMX20_00712 - Threonine synthase, at 734,537 to 735,823 _00712 Position (kb) 731 732 733 734Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 730.199 kb on + strand, within MPMX20_00709at 730.224 kb on + strand, within MPMX20_00709at 730.334 kb on + strand, within MPMX20_00709at 730.344 kb on + strand, within MPMX20_00709at 730.404 kb on - strand, within MPMX20_00709at 730.412 kb on + strand, within MPMX20_00709at 730.467 kb on - strand, within MPMX20_00709at 730.548 kb on - strand, within MPMX20_00709at 730.560 kb on - strand, within MPMX20_00709at 730.570 kb on - strand, within MPMX20_00709at 730.570 kb on - strand, within MPMX20_00709at 730.589 kb on - strand, within MPMX20_00709at 730.589 kb on - strand, within MPMX20_00709at 730.595 kb on - strand, within MPMX20_00709at 730.638 kb on - strand, within MPMX20_00709at 730.644 kb on - strand, within MPMX20_00709at 730.709 kb on + strand, within MPMX20_00709at 730.709 kb on + strand, within MPMX20_00709at 730.717 kb on - strandat 730.717 kb on - strandat 730.717 kb on - strandat 730.727 kb on - strandat 730.732 kb on + strandat 730.735 kb on - strandat 730.735 kb on - strandat 730.740 kb on - strandat 730.740 kb on - strandat 730.740 kb on - strandat 730.817 kb on + strandat 730.826 kb on + strandat 730.829 kb on - strandat 730.840 kb on - strandat 730.859 kb on - strandat 730.871 kb on + strandat 730.915 kb on + strandat 730.915 kb on + strandat 730.925 kb on + strandat 730.925 kb on + strandat 731.022 kb on - strandat 731.058 kb on + strandat 731.089 kb on + strandat 731.091 kb on + strandat 731.130 kb on + strandat 731.130 kb on + strandat 731.136 kb on - strandat 731.214 kb on - strandat 731.214 kb on - strandat 731.219 kb on + strandat 731.219 kb on + strandat 731.220 kb on + strandat 731.227 kb on - strandat 731.243 kb on - strandat 731.282 kb on - strandat 731.406 kb on + strand, within MPMX20_00710at 731.430 kb on - strand, within MPMX20_00710at 731.489 kb on + strand, within MPMX20_00710at 731.508 kb on - strand, within MPMX20_00710at 731.508 kb on - strand, within MPMX20_00710at 731.619 kb on - strand, within MPMX20_00710at 731.624 kb on + strand, within MPMX20_00710at 731.748 kb on - strand, within MPMX20_00710at 731.748 kb on - strand, within MPMX20_00710at 731.756 kb on + strand, within MPMX20_00710at 731.756 kb on + strand, within MPMX20_00710at 731.811 kb on + strand, within MPMX20_00710at 731.831 kb on + strand, within MPMX20_00710at 731.831 kb on + strand, within MPMX20_00710at 731.833 kb on + strand, within MPMX20_00710at 731.838 kb on - strand, within MPMX20_00710at 731.840 kb on + strand, within MPMX20_00710at 731.841 kb on - strand, within MPMX20_00710at 731.880 kb on + strand, within MPMX20_00710at 731.929 kb on - strand, within MPMX20_00710at 731.972 kb on + strand, within MPMX20_00710at 732.016 kb on - strand, within MPMX20_00710at 732.070 kb on + strand, within MPMX20_00710at 732.086 kb on - strand, within MPMX20_00710at 732.173 kb on + strand, within MPMX20_00710at 732.205 kb on - strand, within MPMX20_00710at 732.226 kb on + strand, within MPMX20_00710at 732.241 kb on - strand, within MPMX20_00710at 732.278 kb on - strand, within MPMX20_00710at 732.364 kb on - strand, within MPMX20_00710at 732.366 kb on + strand, within MPMX20_00710at 732.379 kb on + strand, within MPMX20_00710at 732.399 kb on + strand, within MPMX20_00710at 732.399 kb on + strand, within MPMX20_00710at 732.407 kb on - strand, within MPMX20_00710at 732.435 kb on + strand, within MPMX20_00710at 732.438 kb on - strand, within MPMX20_00710at 732.438 kb on - strand, within MPMX20_00710at 732.443 kb on - strand, within MPMX20_00710at 732.524 kb on - strand, within MPMX20_00710at 732.524 kb on - strand, within MPMX20_00710at 732.524 kb on - strand, within MPMX20_00710at 732.585 kb on - strand, within MPMX20_00710at 732.588 kb on + strand, within MPMX20_00710at 732.588 kb on + strand, within MPMX20_00710at 732.588 kb on + strand, within MPMX20_00710at 732.596 kb on - strand, within MPMX20_00710at 732.675 kb on + strand, within MPMX20_00710at 732.719 kb on + strand, within MPMX20_00710at 732.754 kb on - strand, within MPMX20_00710at 732.767 kb on + strand, within MPMX20_00710at 733.086 kb on + strand, within MPMX20_00710at 733.088 kb on - strand, within MPMX20_00710at 733.126 kb on - strand, within MPMX20_00710at 733.128 kb on + strand, within MPMX20_00710at 733.188 kb on + strand, within MPMX20_00710at 733.211 kb on + strand, within MPMX20_00710at 733.217 kb on + strand, within MPMX20_00710at 733.270 kb on - strand, within MPMX20_00710at 733.282 kb on - strand, within MPMX20_00710at 733.297 kb on - strand, within MPMX20_00710at 733.309 kb on - strand, within MPMX20_00710at 733.309 kb on - strand, within MPMX20_00710at 733.309 kb on - strand, within MPMX20_00710at 733.363 kb on + strandat 733.396 kb on + strandat 733.396 kb on + strandat 733.404 kb on - strandat 733.404 kb on - strandat 733.404 kb on - strandat 733.597 kb on + strandat 733.624 kb on + strandat 733.660 kb on + strandat 733.697 kb on - strand, within MPMX20_00711at 733.702 kb on - strand, within MPMX20_00711at 733.731 kb on + strand, within MPMX20_00711at 733.732 kb on - strand, within MPMX20_00711at 733.732 kb on - strand, within MPMX20_00711at 733.745 kb on + strand, within MPMX20_00711at 733.811 kb on + strand, within MPMX20_00711at 733.814 kb on - strand, within MPMX20_00711at 733.814 kb on - strand, within MPMX20_00711at 733.829 kb on - strand, within MPMX20_00711at 733.829 kb on - strand, within MPMX20_00711at 733.881 kb on + strand, within MPMX20_00711at 733.881 kb on + strand, within MPMX20_00711at 733.884 kb on - strand, within MPMX20_00711at 733.886 kb on + strand, within MPMX20_00711at 733.886 kb on + strand, within MPMX20_00711at 733.886 kb on + strand, within MPMX20_00711at 733.889 kb on - strand, within MPMX20_00711at 733.889 kb on - strand, within MPMX20_00711at 733.894 kb on - strand, within MPMX20_00711at 733.997 kb on - strand, within MPMX20_00711at 734.103 kb on + strand, within MPMX20_00711at 734.103 kb on + strand, within MPMX20_00711at 734.103 kb on + strand, within MPMX20_00711at 734.104 kb on - strand, within MPMX20_00711at 734.111 kb on - strand, within MPMX20_00711at 734.111 kb on - strand, within MPMX20_00711at 734.111 kb on - strand, within MPMX20_00711at 734.131 kb on - strand, within MPMX20_00711at 734.139 kb on + strand, within MPMX20_00711at 734.154 kb on - strand, within MPMX20_00711at 734.166 kb on + strand, within MPMX20_00711at 734.197 kb on + strand, within MPMX20_00711at 734.205 kb on - strand, within MPMX20_00711at 734.205 kb on - strand, within MPMX20_00711at 734.214 kb on + strand, within MPMX20_00711at 734.234 kb on + strand, within MPMX20_00711at 734.242 kb on - strand, within MPMX20_00711at 734.302 kb on + strand, within MPMX20_00711at 734.302 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.315 kb on - strand, within MPMX20_00711at 734.315 kb on - strand, within MPMX20_00711at 734.325 kb on + strand, within MPMX20_00711at 734.368 kb on + strand, within MPMX20_00711at 734.369 kb on - strand, within MPMX20_00711at 734.419 kb on + strand, within MPMX20_00711at 734.452 kb on - strandat 734.503 kb on + strandat 734.527 kb on - strandat 734.572 kb on + strandat 734.572 kb on + strandat 734.587 kb on + strandat 734.595 kb on + strandat 734.595 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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730,199 + MPMX20_00709 0.15 +0.8
730,224 + MPMX20_00709 0.19 +0.5
730,334 + MPMX20_00709 0.35 -0.3
730,344 + MPMX20_00709 0.37 -0.9
730,404 - MPMX20_00709 0.45 -1.0
730,412 + MPMX20_00709 0.46 +0.0
730,467 - MPMX20_00709 0.54 +0.4
730,548 - MPMX20_00709 0.66 -0.6
730,560 - MPMX20_00709 0.68 +0.3
730,570 - MPMX20_00709 0.69 +0.6
730,570 - MPMX20_00709 0.69 -0.5
730,589 - MPMX20_00709 0.72 +0.6
730,589 - MPMX20_00709 0.72 +0.4
730,595 - MPMX20_00709 0.73 -0.1
730,638 - MPMX20_00709 0.79 +0.4
730,644 - MPMX20_00709 0.80 -0.1
730,709 + MPMX20_00709 0.90 -1.0
730,709 + MPMX20_00709 0.90 +0.2
730,717 - -0.9
730,717 - +0.1
730,717 - -1.8
730,727 - -0.2
730,732 + +0.2
730,735 - +0.5
730,735 - -0.7
730,740 - -2.0
730,740 - +0.4
730,740 - -1.3
730,817 + +0.6
730,826 + -0.4
730,829 - +0.1
730,840 - +1.1
730,859 - -0.6
730,871 + -0.1
730,915 + -0.2
730,915 + -0.6
730,925 + -0.4
730,925 + -1.3
731,022 - -3.6
731,058 + -4.2
731,089 + -0.6
731,091 + -3.0
731,130 + -1.0
731,130 + -1.2
731,136 - -1.9
731,214 - -3.1
731,214 - -4.4
731,219 + -3.6
731,219 + -2.9
731,220 + -4.0
731,227 - -1.5
731,243 - -0.8
731,282 - -2.7
731,406 + MPMX20_00710 0.11 -3.5
731,430 - MPMX20_00710 0.12 -4.3
731,489 + MPMX20_00710 0.14 -3.3
731,508 - MPMX20_00710 0.15 -2.7
731,508 - MPMX20_00710 0.15 -3.8
731,619 - MPMX20_00710 0.19 -1.2
731,624 + MPMX20_00710 0.20 -4.5
731,748 - MPMX20_00710 0.25 -0.8
731,748 - MPMX20_00710 0.25 -2.1
731,756 + MPMX20_00710 0.25 -1.2
731,756 + MPMX20_00710 0.25 -3.3
731,811 + MPMX20_00710 0.27 -4.5
731,831 + MPMX20_00710 0.28 -4.5
731,831 + MPMX20_00710 0.28 -5.4
731,833 + MPMX20_00710 0.28 -3.9
731,838 - MPMX20_00710 0.28 -4.9
731,840 + MPMX20_00710 0.28 -4.4
731,841 - MPMX20_00710 0.28 -2.1
731,880 + MPMX20_00710 0.30 -4.7
731,929 - MPMX20_00710 0.32 -1.9
731,972 + MPMX20_00710 0.34 -4.0
732,016 - MPMX20_00710 0.36 -3.7
732,070 + MPMX20_00710 0.38 -2.0
732,086 - MPMX20_00710 0.38 -4.5
732,173 + MPMX20_00710 0.42 -3.1
732,205 - MPMX20_00710 0.43 -4.7
732,226 + MPMX20_00710 0.44 -3.6
732,241 - MPMX20_00710 0.45 -3.4
732,278 - MPMX20_00710 0.46 -3.2
732,364 - MPMX20_00710 0.50 -4.0
732,366 + MPMX20_00710 0.50 -4.6
732,379 + MPMX20_00710 0.50 -4.2
732,399 + MPMX20_00710 0.51 -3.8
732,399 + MPMX20_00710 0.51 -0.8
732,407 - MPMX20_00710 0.51 -1.8
732,435 + MPMX20_00710 0.53 -3.9
732,438 - MPMX20_00710 0.53 -1.8
732,438 - MPMX20_00710 0.53 -3.9
732,443 - MPMX20_00710 0.53 -3.2
732,524 - MPMX20_00710 0.56 -2.1
732,524 - MPMX20_00710 0.56 -3.9
732,524 - MPMX20_00710 0.56 -0.6
732,585 - MPMX20_00710 0.59 -1.8
732,588 + MPMX20_00710 0.59 -3.2
732,588 + MPMX20_00710 0.59 -3.0
732,588 + MPMX20_00710 0.59 -2.4
732,596 - MPMX20_00710 0.59 -2.6
732,675 + MPMX20_00710 0.62 -2.4
732,719 + MPMX20_00710 0.64 -3.2
732,754 - MPMX20_00710 0.66 -4.5
732,767 + MPMX20_00710 0.66 -1.2
733,086 + MPMX20_00710 0.79 -3.1
733,088 - MPMX20_00710 0.79 -4.3
733,126 - MPMX20_00710 0.81 -4.4
733,128 + MPMX20_00710 0.81 -4.9
733,188 + MPMX20_00710 0.83 -2.3
733,211 + MPMX20_00710 0.84 -0.8
733,217 + MPMX20_00710 0.84 -1.7
733,270 - MPMX20_00710 0.86 -3.1
733,282 - MPMX20_00710 0.87 -2.5
733,297 - MPMX20_00710 0.88 -1.6
733,309 - MPMX20_00710 0.88 -4.7
733,309 - MPMX20_00710 0.88 -2.5
733,309 - MPMX20_00710 0.88 -3.1
733,363 + -2.3
733,396 + -2.6
733,396 + -1.6
733,404 - -1.6
733,404 - -1.7
733,404 - -3.9
733,597 + -1.9
733,624 + -3.9
733,660 + -1.7
733,697 - MPMX20_00711 0.10 -1.6
733,702 - MPMX20_00711 0.11 -5.3
733,731 + MPMX20_00711 0.14 -4.6
733,732 - MPMX20_00711 0.14 -3.1
733,732 - MPMX20_00711 0.14 -0.8
733,745 + MPMX20_00711 0.15 -3.1
733,811 + MPMX20_00711 0.22 -2.8
733,814 - MPMX20_00711 0.23 +0.8
733,814 - MPMX20_00711 0.23 -2.5
733,829 - MPMX20_00711 0.24 -3.7
733,829 - MPMX20_00711 0.24 -2.9
733,881 + MPMX20_00711 0.30 -4.6
733,881 + MPMX20_00711 0.30 -4.5
733,884 - MPMX20_00711 0.30 -4.6
733,886 + MPMX20_00711 0.30 -3.4
733,886 + MPMX20_00711 0.30 -1.3
733,886 + MPMX20_00711 0.30 -2.6
733,889 - MPMX20_00711 0.31 -3.0
733,889 - MPMX20_00711 0.31 -3.8
733,894 - MPMX20_00711 0.31 -3.9
733,997 - MPMX20_00711 0.42 -3.3
734,103 + MPMX20_00711 0.54 -4.8
734,103 + MPMX20_00711 0.54 -3.1
734,103 + MPMX20_00711 0.54 -2.8
734,104 - MPMX20_00711 0.54 -3.8
734,111 - MPMX20_00711 0.55 -3.9
734,111 - MPMX20_00711 0.55 -1.9
734,111 - MPMX20_00711 0.55 -3.3
734,131 - MPMX20_00711 0.57 -3.7
734,139 + MPMX20_00711 0.58 -1.7
734,154 - MPMX20_00711 0.59 -4.2
734,166 + MPMX20_00711 0.60 -3.8
734,197 + MPMX20_00711 0.64 -3.7
734,205 - MPMX20_00711 0.65 -4.0
734,205 - MPMX20_00711 0.65 -4.0
734,214 + MPMX20_00711 0.66 -1.9
734,234 + MPMX20_00711 0.68 -0.6
734,242 - MPMX20_00711 0.69 -2.8
734,302 + MPMX20_00711 0.75 -3.5
734,302 + MPMX20_00711 0.75 -2.9
734,307 + MPMX20_00711 0.76 -2.0
734,307 + MPMX20_00711 0.76 -3.7
734,307 + MPMX20_00711 0.76 -3.2
734,307 + MPMX20_00711 0.76 -4.2
734,315 - MPMX20_00711 0.76 -2.0
734,315 - MPMX20_00711 0.76 -3.3
734,325 + MPMX20_00711 0.78 -2.2
734,368 + MPMX20_00711 0.82 -2.7
734,369 - MPMX20_00711 0.82 -0.8
734,419 + MPMX20_00711 0.88 -3.4
734,452 - -2.0
734,503 + -0.8
734,527 - -3.7
734,572 + -1.7
734,572 + -4.0
734,587 + -2.2
734,595 + -3.5
734,595 + -2.9

Or see this region's nucleotide sequence