Experiment: Thymine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03384 and MPMX20_03385 are separated by 0 nucleotides MPMX20_03385 and MPMX20_03386 overlap by 4 nucleotides MPMX20_03386 and MPMX20_03387 are separated by 52 nucleotides MPMX20_03387 and MPMX20_03388 are separated by 65 nucleotides
MPMX20_03384: MPMX20_03384 - Protease PrtS, at 3,564,295 to 3,565,314
_03384
MPMX20_03385: MPMX20_03385 - hypothetical protein, at 3,565,315 to 3,565,665
_03385
MPMX20_03386: MPMX20_03386 - putative protein YfgJ, at 3,565,662 to 3,565,883
_03386
MPMX20_03387: MPMX20_03387 - hypothetical protein, at 3,565,936 to 3,566,970
_03387
MPMX20_03388: MPMX20_03388 - Di-/tripeptide transporter, at 3,567,036 to 3,568,577
_03388
Position (kb)
3565
3566
3567 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3564.975 kb on - strand, within MPMX20_03384 at 3564.999 kb on - strand, within MPMX20_03384 at 3565.008 kb on + strand, within MPMX20_03384 at 3565.026 kb on + strand, within MPMX20_03384 at 3565.088 kb on - strand, within MPMX20_03384 at 3565.156 kb on + strand, within MPMX20_03384 at 3565.164 kb on - strand, within MPMX20_03384 at 3565.339 kb on + strand at 3565.414 kb on - strand, within MPMX20_03385 at 3565.414 kb on - strand, within MPMX20_03385 at 3565.500 kb on - strand, within MPMX20_03385 at 3565.513 kb on - strand, within MPMX20_03385 at 3565.560 kb on + strand, within MPMX20_03385 at 3565.570 kb on - strand, within MPMX20_03385 at 3565.618 kb on - strand, within MPMX20_03385 at 3565.650 kb on - strand at 3565.674 kb on - strand at 3565.813 kb on - strand, within MPMX20_03386 at 3565.908 kb on + strand at 3565.932 kb on + strand at 3565.945 kb on - strand at 3565.945 kb on - strand at 3565.961 kb on - strand at 3565.967 kb on - strand at 3566.038 kb on - strand at 3566.064 kb on + strand, within MPMX20_03387 at 3566.064 kb on + strand, within MPMX20_03387 at 3566.064 kb on + strand, within MPMX20_03387 at 3566.066 kb on + strand, within MPMX20_03387 at 3566.072 kb on - strand, within MPMX20_03387 at 3566.072 kb on - strand, within MPMX20_03387 at 3566.072 kb on - strand, within MPMX20_03387 at 3566.102 kb on - strand, within MPMX20_03387 at 3566.287 kb on + strand, within MPMX20_03387 at 3566.436 kb on - strand, within MPMX20_03387 at 3566.465 kb on - strand, within MPMX20_03387 at 3566.488 kb on + strand, within MPMX20_03387 at 3566.579 kb on + strand, within MPMX20_03387 at 3566.734 kb on + strand, within MPMX20_03387 at 3566.737 kb on - strand, within MPMX20_03387 at 3566.754 kb on + strand, within MPMX20_03387 at 3566.800 kb on - strand, within MPMX20_03387 at 3566.843 kb on + strand, within MPMX20_03387 at 3566.930 kb on + strand at 3567.052 kb on + strand at 3567.178 kb on + strand at 3567.178 kb on + strand at 3567.186 kb on - strand at 3567.203 kb on - strand, within MPMX20_03388 at 3567.211 kb on + strand, within MPMX20_03388 at 3567.229 kb on + strand, within MPMX20_03388 at 3567.252 kb on - strand, within MPMX20_03388 at 3567.387 kb on - strand, within MPMX20_03388 at 3567.566 kb on - strand, within MPMX20_03388 at 3567.567 kb on - strand, within MPMX20_03388 at 3567.601 kb on + strand, within MPMX20_03388 at 3567.609 kb on - strand, within MPMX20_03388 at 3567.652 kb on + strand, within MPMX20_03388 at 3567.688 kb on - strand, within MPMX20_03388 at 3567.690 kb on + strand, within MPMX20_03388 at 3567.698 kb on - strand, within MPMX20_03388 at 3567.792 kb on + strand, within MPMX20_03388 at 3567.844 kb on - strand, within MPMX20_03388 at 3567.856 kb on + strand, within MPMX20_03388 at 3567.912 kb on + strand, within MPMX20_03388
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (C) remove 3,564,975 - MPMX20_03384 0.67 -0.0 3,564,999 - MPMX20_03384 0.69 -0.6 3,565,008 + MPMX20_03384 0.70 -1.9 3,565,026 + MPMX20_03384 0.72 -0.3 3,565,088 - MPMX20_03384 0.78 +0.3 3,565,156 + MPMX20_03384 0.84 -1.1 3,565,164 - MPMX20_03384 0.85 +1.1 3,565,339 + -0.0 3,565,414 - MPMX20_03385 0.28 +0.2 3,565,414 - MPMX20_03385 0.28 -0.3 3,565,500 - MPMX20_03385 0.53 +0.0 3,565,513 - MPMX20_03385 0.56 -0.0 3,565,560 + MPMX20_03385 0.70 -1.7 3,565,570 - MPMX20_03385 0.73 +0.5 3,565,618 - MPMX20_03385 0.86 -2.2 3,565,650 - -0.5 3,565,674 - +1.1 3,565,813 - MPMX20_03386 0.68 -3.1 3,565,908 + +0.7 3,565,932 + +2.0 3,565,945 - +1.1 3,565,945 - +0.8 3,565,961 - +0.5 3,565,967 - +0.9 3,566,038 - +0.5 3,566,064 + MPMX20_03387 0.12 -1.3 3,566,064 + MPMX20_03387 0.12 +1.6 3,566,064 + MPMX20_03387 0.12 +2.0 3,566,066 + MPMX20_03387 0.13 +0.6 3,566,072 - MPMX20_03387 0.13 +0.3 3,566,072 - MPMX20_03387 0.13 -1.2 3,566,072 - MPMX20_03387 0.13 -0.6 3,566,102 - MPMX20_03387 0.16 +0.8 3,566,287 + MPMX20_03387 0.34 -0.2 3,566,436 - MPMX20_03387 0.48 -2.3 3,566,465 - MPMX20_03387 0.51 -0.6 3,566,488 + MPMX20_03387 0.53 -0.3 3,566,579 + MPMX20_03387 0.62 +1.1 3,566,734 + MPMX20_03387 0.77 -1.2 3,566,737 - MPMX20_03387 0.77 -0.8 3,566,754 + MPMX20_03387 0.79 -0.9 3,566,800 - MPMX20_03387 0.83 -0.8 3,566,843 + MPMX20_03387 0.88 -2.2 3,566,930 + -1.2 3,567,052 + -2.1 3,567,178 + +0.3 3,567,178 + +3.0 3,567,186 - +0.7 3,567,203 - MPMX20_03388 0.11 +0.4 3,567,211 + MPMX20_03388 0.11 -0.0 3,567,229 + MPMX20_03388 0.13 -1.5 3,567,252 - MPMX20_03388 0.14 +2.1 3,567,387 - MPMX20_03388 0.23 -1.1 3,567,566 - MPMX20_03388 0.34 +0.2 3,567,567 - MPMX20_03388 0.34 -0.3 3,567,601 + MPMX20_03388 0.37 -1.0 3,567,609 - MPMX20_03388 0.37 +2.0 3,567,652 + MPMX20_03388 0.40 -1.5 3,567,688 - MPMX20_03388 0.42 -2.9 3,567,690 + MPMX20_03388 0.42 -1.2 3,567,698 - MPMX20_03388 0.43 +2.8 3,567,792 + MPMX20_03388 0.49 -1.4 3,567,844 - MPMX20_03388 0.52 -1.0 3,567,856 + MPMX20_03388 0.53 -2.8 3,567,912 + MPMX20_03388 0.57 -2.9
Or see this region's nucleotide sequence