Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00765

Experiment: Thymine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00763 and MPMX20_00764 are separated by 88 nucleotidesMPMX20_00764 and MPMX20_00765 are separated by 119 nucleotidesMPMX20_00765 and MPMX20_00766 are separated by 201 nucleotidesMPMX20_00766 and MPMX20_00767 are separated by 10 nucleotides MPMX20_00763: MPMX20_00763 - HTH-type transcriptional regulator SgrR, at 794,488 to 796,143 _00763 MPMX20_00764: MPMX20_00764 - hypothetical protein, at 796,232 to 796,384 _00764 MPMX20_00765: MPMX20_00765 - Sugar efflux transporter A, at 796,504 to 797,682 _00765 MPMX20_00766: MPMX20_00766 - 3-isopropylmalate dehydratase small subunit 1, at 797,884 to 798,489 _00766 MPMX20_00767: MPMX20_00767 - 3-isopropylmalate dehydratase large subunit 1, at 798,500 to 799,900 _00767 Position (kb) 796 797 798Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 795.548 kb on + strand, within MPMX20_00763at 795.553 kb on + strand, within MPMX20_00763at 795.560 kb on - strand, within MPMX20_00763at 795.622 kb on - strand, within MPMX20_00763at 795.724 kb on + strand, within MPMX20_00763at 795.732 kb on - strand, within MPMX20_00763at 795.732 kb on - strand, within MPMX20_00763at 795.837 kb on + strand, within MPMX20_00763at 795.883 kb on - strand, within MPMX20_00763at 795.937 kb on - strand, within MPMX20_00763at 795.937 kb on - strand, within MPMX20_00763at 795.940 kb on + strand, within MPMX20_00763at 795.953 kb on - strand, within MPMX20_00763at 795.975 kb on - strand, within MPMX20_00763at 795.977 kb on + strand, within MPMX20_00763at 795.994 kb on - strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.007 kb on + strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.015 kb on - strandat 796.040 kb on + strandat 796.040 kb on - strandat 796.042 kb on + strandat 796.050 kb on - strandat 796.068 kb on + strandat 796.214 kb on + strandat 796.291 kb on + strand, within MPMX20_00764at 796.309 kb on - strand, within MPMX20_00764at 796.311 kb on + strand, within MPMX20_00764at 796.393 kb on + strandat 796.506 kb on + strandat 796.513 kb on - strandat 796.531 kb on + strandat 796.645 kb on - strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.662 kb on + strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.670 kb on - strand, within MPMX20_00765at 796.677 kb on + strand, within MPMX20_00765at 796.700 kb on + strand, within MPMX20_00765at 796.700 kb on + strand, within MPMX20_00765at 796.771 kb on + strand, within MPMX20_00765at 796.811 kb on + strand, within MPMX20_00765at 796.819 kb on + strand, within MPMX20_00765at 796.962 kb on - strand, within MPMX20_00765at 796.967 kb on - strand, within MPMX20_00765at 796.978 kb on + strand, within MPMX20_00765at 796.985 kb on + strand, within MPMX20_00765at 796.996 kb on + strand, within MPMX20_00765at 797.054 kb on + strand, within MPMX20_00765at 797.054 kb on + strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.074 kb on + strand, within MPMX20_00765at 797.074 kb on + strand, within MPMX20_00765at 797.079 kb on + strand, within MPMX20_00765at 797.081 kb on + strand, within MPMX20_00765at 797.082 kb on - strand, within MPMX20_00765at 797.087 kb on - strand, within MPMX20_00765at 797.087 kb on - strand, within MPMX20_00765at 797.110 kb on + strand, within MPMX20_00765at 797.116 kb on - strand, within MPMX20_00765at 797.117 kb on - strand, within MPMX20_00765at 797.120 kb on + strand, within MPMX20_00765at 797.122 kb on + strand, within MPMX20_00765at 797.130 kb on - strand, within MPMX20_00765at 797.130 kb on - strand, within MPMX20_00765at 797.236 kb on + strand, within MPMX20_00765at 797.255 kb on + strand, within MPMX20_00765at 797.276 kb on - strand, within MPMX20_00765at 797.439 kb on + strand, within MPMX20_00765at 797.447 kb on - strand, within MPMX20_00765at 797.447 kb on - strand, within MPMX20_00765at 797.471 kb on + strand, within MPMX20_00765at 797.479 kb on - strand, within MPMX20_00765at 797.479 kb on - strand, within MPMX20_00765at 797.515 kb on + strand, within MPMX20_00765at 797.543 kb on + strand, within MPMX20_00765at 797.611 kb on + strandat 797.636 kb on + strandat 797.660 kb on - strandat 797.675 kb on - strandat 797.724 kb on + strandat 797.735 kb on + strandat 797.758 kb on + strandat 797.759 kb on - strandat 797.808 kb on - strandat 797.823 kb on - strandat 797.882 kb on + strandat 797.883 kb on - strandat 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.957 kb on - strand, within MPMX20_00766at 797.959 kb on + strand, within MPMX20_00766at 797.967 kb on - strand, within MPMX20_00766at 797.967 kb on - strand, within MPMX20_00766at 798.077 kb on + strand, within MPMX20_00766at 798.085 kb on - strand, within MPMX20_00766at 798.192 kb on + strand, within MPMX20_00766at 798.220 kb on + strand, within MPMX20_00766at 798.324 kb on - strand, within MPMX20_00766at 798.392 kb on - strand, within MPMX20_00766at 798.564 kb on - strandat 798.566 kb on + strandat 798.566 kb on + strandat 798.574 kb on - strandat 798.626 kb on + strandat 798.659 kb on + strand, within MPMX20_00767

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine (C)
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795,548 + MPMX20_00763 0.64 +1.0
795,553 + MPMX20_00763 0.64 -3.0
795,560 - MPMX20_00763 0.65 -0.2
795,622 - MPMX20_00763 0.68 -0.2
795,724 + MPMX20_00763 0.75 +0.4
795,732 - MPMX20_00763 0.75 -1.1
795,732 - MPMX20_00763 0.75 +1.2
795,837 + MPMX20_00763 0.81 +2.2
795,883 - MPMX20_00763 0.84 -0.9
795,937 - MPMX20_00763 0.88 +0.9
795,937 - MPMX20_00763 0.88 -0.0
795,940 + MPMX20_00763 0.88 -0.3
795,953 - MPMX20_00763 0.88 -2.0
795,975 - MPMX20_00763 0.90 +0.4
795,977 + MPMX20_00763 0.90 -1.5
795,994 - -1.0
796,007 + +1.4
796,007 + -0.8
796,007 + -1.5
796,007 + +0.6
796,007 + +0.6
796,007 + +0.1
796,007 + -0.3
796,007 + -1.0
796,007 + -1.8
796,007 + -0.5
796,007 + -0.1
796,007 + +0.1
796,007 + -0.8
796,007 + +2.1
796,007 + -0.3
796,015 - -0.0
796,015 - +2.3
796,015 - +0.6
796,015 - +1.5
796,015 - +0.8
796,015 - +0.7
796,015 - +0.8
796,015 - -1.4
796,015 - +0.4
796,015 - -0.8
796,015 - +0.4
796,040 + +1.0
796,040 - -0.2
796,042 + +1.5
796,050 - +0.3
796,068 + +0.9
796,214 + -0.5
796,291 + MPMX20_00764 0.39 -0.6
796,309 - MPMX20_00764 0.50 +1.0
796,311 + MPMX20_00764 0.52 +0.2
796,393 + +2.6
796,506 + +0.1
796,513 - +2.2
796,531 + +0.0
796,645 - MPMX20_00765 0.12 +0.0
796,662 + MPMX20_00765 0.13 +0.3
796,662 + MPMX20_00765 0.13 +0.4
796,662 + MPMX20_00765 0.13 -0.7
796,662 + MPMX20_00765 0.13 -0.3
796,662 + MPMX20_00765 0.13 -2.2
796,662 + MPMX20_00765 0.13 +0.9
796,670 - MPMX20_00765 0.14 -0.9
796,670 - MPMX20_00765 0.14 -3.2
796,670 - MPMX20_00765 0.14 -0.6
796,670 - MPMX20_00765 0.14 +1.1
796,670 - MPMX20_00765 0.14 +1.3
796,670 - MPMX20_00765 0.14 -0.1
796,677 + MPMX20_00765 0.15 -0.8
796,700 + MPMX20_00765 0.17 -0.2
796,700 + MPMX20_00765 0.17 +1.8
796,771 + MPMX20_00765 0.23 -1.7
796,811 + MPMX20_00765 0.26 +0.7
796,819 + MPMX20_00765 0.27 +0.7
796,962 - MPMX20_00765 0.39 +0.8
796,967 - MPMX20_00765 0.39 +0.3
796,978 + MPMX20_00765 0.40 -0.9
796,985 + MPMX20_00765 0.41 -0.2
796,996 + MPMX20_00765 0.42 +0.6
797,054 + MPMX20_00765 0.47 -1.8
797,054 + MPMX20_00765 0.47 -0.0
797,062 - MPMX20_00765 0.47 +0.6
797,062 - MPMX20_00765 0.47 +1.5
797,062 - MPMX20_00765 0.47 -0.9
797,062 - MPMX20_00765 0.47 +0.8
797,074 + MPMX20_00765 0.48 +1.2
797,074 + MPMX20_00765 0.48 +0.6
797,079 + MPMX20_00765 0.49 +1.8
797,081 + MPMX20_00765 0.49 +0.8
797,082 - MPMX20_00765 0.49 +2.1
797,087 - MPMX20_00765 0.49 -2.2
797,087 - MPMX20_00765 0.49 +2.2
797,110 + MPMX20_00765 0.51 -2.2
797,116 - MPMX20_00765 0.52 +0.2
797,117 - MPMX20_00765 0.52 +1.2
797,120 + MPMX20_00765 0.52 +0.1
797,122 + MPMX20_00765 0.52 -0.1
797,130 - MPMX20_00765 0.53 +1.3
797,130 - MPMX20_00765 0.53 -1.0
797,236 + MPMX20_00765 0.62 +0.3
797,255 + MPMX20_00765 0.64 +1.3
797,276 - MPMX20_00765 0.65 -1.8
797,439 + MPMX20_00765 0.79 -0.1
797,447 - MPMX20_00765 0.80 +0.0
797,447 - MPMX20_00765 0.80 -0.3
797,471 + MPMX20_00765 0.82 +0.2
797,479 - MPMX20_00765 0.83 +0.7
797,479 - MPMX20_00765 0.83 +1.0
797,515 + MPMX20_00765 0.86 +1.2
797,543 + MPMX20_00765 0.88 -0.9
797,611 + -1.2
797,636 + +0.1
797,660 - +1.6
797,675 - -0.5
797,724 + -0.5
797,735 + +0.6
797,758 + -1.9
797,759 - -1.5
797,808 - +1.4
797,823 - -0.3
797,882 + -1.8
797,883 - +1.7
797,949 + MPMX20_00766 0.11 +0.3
797,949 + MPMX20_00766 0.11 -2.1
797,949 + MPMX20_00766 0.11 +2.0
797,949 + MPMX20_00766 0.11 -1.5
797,949 + MPMX20_00766 0.11 -0.9
797,949 + MPMX20_00766 0.11 +0.9
797,957 - MPMX20_00766 0.12 +2.1
797,959 + MPMX20_00766 0.12 -2.1
797,967 - MPMX20_00766 0.14 -0.9
797,967 - MPMX20_00766 0.14 -1.2
798,077 + MPMX20_00766 0.32 +0.2
798,085 - MPMX20_00766 0.33 -1.8
798,192 + MPMX20_00766 0.51 +1.7
798,220 + MPMX20_00766 0.55 +2.2
798,324 - MPMX20_00766 0.73 +1.9
798,392 - MPMX20_00766 0.84 +1.8
798,564 - +0.6
798,566 + -0.5
798,566 + -1.0
798,574 - -0.8
798,626 + -0.8
798,659 + MPMX20_00767 0.11 +1.0

Or see this region's nucleotide sequence