Experiment: Cytidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02031 and MPMX20_02032 are separated by 10 nucleotides MPMX20_02032 and MPMX20_02033 are separated by 50 nucleotides
MPMX20_02031: MPMX20_02031 - NAD(P) transhydrogenase subunit alpha, at 2,123,148 to 2,124,677
_02031
MPMX20_02032: MPMX20_02032 - NAD(P) transhydrogenase subunit beta, at 2,124,688 to 2,126,076
_02032
MPMX20_02033: MPMX20_02033 - Universal stress protein E, at 2,126,127 to 2,127,077
_02033
Position (kb)
2124
2125
2126
2127 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2123.732 kb on + strand, within MPMX20_02031 at 2123.837 kb on - strand, within MPMX20_02031 at 2123.882 kb on + strand, within MPMX20_02031 at 2123.882 kb on + strand, within MPMX20_02031 at 2123.882 kb on + strand, within MPMX20_02031 at 2123.890 kb on - strand, within MPMX20_02031 at 2123.908 kb on + strand, within MPMX20_02031 at 2123.932 kb on - strand, within MPMX20_02031 at 2123.950 kb on + strand, within MPMX20_02031 at 2123.968 kb on - strand, within MPMX20_02031 at 2124.005 kb on + strand, within MPMX20_02031 at 2124.072 kb on + strand, within MPMX20_02031 at 2124.078 kb on + strand, within MPMX20_02031 at 2124.080 kb on - strand, within MPMX20_02031 at 2124.123 kb on - strand, within MPMX20_02031 at 2124.123 kb on - strand, within MPMX20_02031 at 2124.130 kb on + strand, within MPMX20_02031 at 2124.130 kb on + strand, within MPMX20_02031 at 2124.133 kb on - strand, within MPMX20_02031 at 2124.138 kb on - strand, within MPMX20_02031 at 2124.138 kb on - strand, within MPMX20_02031 at 2124.202 kb on + strand, within MPMX20_02031 at 2124.204 kb on + strand, within MPMX20_02031 at 2124.258 kb on - strand, within MPMX20_02031 at 2124.270 kb on - strand, within MPMX20_02031 at 2124.289 kb on - strand, within MPMX20_02031 at 2124.289 kb on - strand, within MPMX20_02031 at 2124.329 kb on + strand, within MPMX20_02031 at 2124.424 kb on + strand, within MPMX20_02031 at 2124.432 kb on - strand, within MPMX20_02031 at 2124.443 kb on + strand, within MPMX20_02031 at 2124.451 kb on - strand, within MPMX20_02031 at 2124.451 kb on - strand, within MPMX20_02031 at 2124.461 kb on - strand, within MPMX20_02031 at 2124.489 kb on - strand, within MPMX20_02031 at 2124.498 kb on + strand, within MPMX20_02031 at 2124.551 kb on + strand at 2124.574 kb on + strand at 2124.574 kb on + strand at 2124.640 kb on - strand at 2124.672 kb on + strand at 2124.680 kb on - strand at 2124.680 kb on - strand at 2124.680 kb on - strand at 2124.680 kb on - strand at 2124.680 kb on - strand at 2124.680 kb on - strand at 2124.687 kb on - strand at 2124.692 kb on - strand at 2124.702 kb on + strand at 2124.705 kb on - strand at 2124.710 kb on - strand at 2124.733 kb on - strand at 2124.744 kb on - strand at 2124.773 kb on + strand at 2124.781 kb on - strand at 2124.793 kb on - strand at 2124.817 kb on + strand at 2124.907 kb on - strand, within MPMX20_02032 at 2124.999 kb on + strand, within MPMX20_02032 at 2125.016 kb on - strand, within MPMX20_02032 at 2125.038 kb on + strand, within MPMX20_02032 at 2125.043 kb on + strand, within MPMX20_02032 at 2125.099 kb on + strand, within MPMX20_02032 at 2125.147 kb on + strand, within MPMX20_02032 at 2125.174 kb on - strand, within MPMX20_02032 at 2125.200 kb on - strand, within MPMX20_02032 at 2125.227 kb on + strand, within MPMX20_02032 at 2125.257 kb on - strand, within MPMX20_02032 at 2125.287 kb on - strand, within MPMX20_02032 at 2125.319 kb on - strand, within MPMX20_02032 at 2125.386 kb on + strand, within MPMX20_02032 at 2125.395 kb on + strand, within MPMX20_02032 at 2125.493 kb on + strand, within MPMX20_02032 at 2125.547 kb on + strand, within MPMX20_02032 at 2125.552 kb on + strand, within MPMX20_02032 at 2125.609 kb on - strand, within MPMX20_02032 at 2125.627 kb on + strand, within MPMX20_02032 at 2125.664 kb on - strand, within MPMX20_02032 at 2125.676 kb on + strand, within MPMX20_02032 at 2125.697 kb on + strand, within MPMX20_02032 at 2125.697 kb on + strand, within MPMX20_02032 at 2125.705 kb on - strand, within MPMX20_02032 at 2125.739 kb on + strand, within MPMX20_02032 at 2125.819 kb on + strand, within MPMX20_02032 at 2125.873 kb on - strand, within MPMX20_02032 at 2125.949 kb on - strand at 2126.051 kb on - strand at 2126.071 kb on + strand at 2126.159 kb on - strand at 2126.208 kb on + strand at 2126.266 kb on + strand, within MPMX20_02033 at 2126.274 kb on - strand, within MPMX20_02033 at 2126.276 kb on + strand, within MPMX20_02033 at 2126.292 kb on + strand, within MPMX20_02033 at 2126.432 kb on - strand, within MPMX20_02033 at 2126.432 kb on - strand, within MPMX20_02033 at 2126.443 kb on + strand, within MPMX20_02033 at 2126.446 kb on - strand, within MPMX20_02033 at 2126.488 kb on + strand, within MPMX20_02033 at 2126.512 kb on - strand, within MPMX20_02033 at 2126.513 kb on + strand, within MPMX20_02033 at 2126.519 kb on - strand, within MPMX20_02033 at 2126.637 kb on + strand, within MPMX20_02033 at 2126.645 kb on - strand, within MPMX20_02033 at 2126.693 kb on + strand, within MPMX20_02033 at 2126.741 kb on + strand, within MPMX20_02033 at 2126.755 kb on - strand, within MPMX20_02033 at 2126.756 kb on - strand, within MPMX20_02033 at 2126.800 kb on + strand, within MPMX20_02033 at 2126.802 kb on - strand, within MPMX20_02033 at 2126.845 kb on + strand, within MPMX20_02033 at 2126.853 kb on - strand, within MPMX20_02033 at 2126.862 kb on + strand, within MPMX20_02033 at 2126.898 kb on - strand, within MPMX20_02033 at 2126.898 kb on - strand, within MPMX20_02033 at 2126.898 kb on - strand, within MPMX20_02033 at 2126.936 kb on + strand, within MPMX20_02033 at 2126.957 kb on - strand, within MPMX20_02033 at 2127.012 kb on + strand at 2127.020 kb on - strand at 2127.035 kb on + strand at 2127.035 kb on + strand at 2127.038 kb on - strand at 2127.043 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine (C) remove 2,123,732 + MPMX20_02031 0.38 -1.2 2,123,837 - MPMX20_02031 0.45 -0.8 2,123,882 + MPMX20_02031 0.48 -0.2 2,123,882 + MPMX20_02031 0.48 -2.6 2,123,882 + MPMX20_02031 0.48 -1.1 2,123,890 - MPMX20_02031 0.48 -0.0 2,123,908 + MPMX20_02031 0.50 -1.2 2,123,932 - MPMX20_02031 0.51 -1.6 2,123,950 + MPMX20_02031 0.52 -1.7 2,123,968 - MPMX20_02031 0.54 +0.1 2,124,005 + MPMX20_02031 0.56 -0.9 2,124,072 + MPMX20_02031 0.60 -0.6 2,124,078 + MPMX20_02031 0.61 -1.3 2,124,080 - MPMX20_02031 0.61 -0.1 2,124,123 - MPMX20_02031 0.64 -0.7 2,124,123 - MPMX20_02031 0.64 +0.8 2,124,130 + MPMX20_02031 0.64 -0.4 2,124,130 + MPMX20_02031 0.64 -0.1 2,124,133 - MPMX20_02031 0.64 -0.7 2,124,138 - MPMX20_02031 0.65 -0.6 2,124,138 - MPMX20_02031 0.65 -0.1 2,124,202 + MPMX20_02031 0.69 -1.4 2,124,204 + MPMX20_02031 0.69 -1.6 2,124,258 - MPMX20_02031 0.73 -1.9 2,124,270 - MPMX20_02031 0.73 -3.1 2,124,289 - MPMX20_02031 0.75 -1.2 2,124,289 - MPMX20_02031 0.75 -1.6 2,124,329 + MPMX20_02031 0.77 -0.3 2,124,424 + MPMX20_02031 0.83 -2.2 2,124,432 - MPMX20_02031 0.84 -1.3 2,124,443 + MPMX20_02031 0.85 -1.1 2,124,451 - MPMX20_02031 0.85 -1.1 2,124,451 - MPMX20_02031 0.85 -0.9 2,124,461 - MPMX20_02031 0.86 -1.6 2,124,489 - MPMX20_02031 0.88 -1.4 2,124,498 + MPMX20_02031 0.88 -0.2 2,124,551 + +0.7 2,124,574 + -0.4 2,124,574 + -0.4 2,124,640 - -0.9 2,124,672 + +2.7 2,124,680 - -0.9 2,124,680 - -0.1 2,124,680 - -1.2 2,124,680 - +0.3 2,124,680 - +1.7 2,124,680 - -1.4 2,124,687 - -1.7 2,124,692 - -0.9 2,124,702 + -0.9 2,124,705 - -0.8 2,124,710 - +0.7 2,124,733 - -0.3 2,124,744 - -1.4 2,124,773 + +0.6 2,124,781 - -0.3 2,124,793 - -2.6 2,124,817 + +0.0 2,124,907 - MPMX20_02032 0.16 -0.8 2,124,999 + MPMX20_02032 0.22 -0.4 2,125,016 - MPMX20_02032 0.24 -2.0 2,125,038 + MPMX20_02032 0.25 -0.3 2,125,043 + MPMX20_02032 0.26 -1.9 2,125,099 + MPMX20_02032 0.30 -1.1 2,125,147 + MPMX20_02032 0.33 -0.3 2,125,174 - MPMX20_02032 0.35 -0.2 2,125,200 - MPMX20_02032 0.37 -1.7 2,125,227 + MPMX20_02032 0.39 -1.0 2,125,257 - MPMX20_02032 0.41 -1.6 2,125,287 - MPMX20_02032 0.43 +0.1 2,125,319 - MPMX20_02032 0.45 -0.6 2,125,386 + MPMX20_02032 0.50 -2.0 2,125,395 + MPMX20_02032 0.51 -1.2 2,125,493 + MPMX20_02032 0.58 -0.9 2,125,547 + MPMX20_02032 0.62 -1.2 2,125,552 + MPMX20_02032 0.62 -0.6 2,125,609 - MPMX20_02032 0.66 -1.1 2,125,627 + MPMX20_02032 0.68 -1.7 2,125,664 - MPMX20_02032 0.70 -1.4 2,125,676 + MPMX20_02032 0.71 +0.5 2,125,697 + MPMX20_02032 0.73 -0.4 2,125,697 + MPMX20_02032 0.73 -0.7 2,125,705 - MPMX20_02032 0.73 -1.2 2,125,739 + MPMX20_02032 0.76 -0.8 2,125,819 + MPMX20_02032 0.81 -0.6 2,125,873 - MPMX20_02032 0.85 -0.5 2,125,949 - -0.7 2,126,051 - +0.5 2,126,071 + -0.0 2,126,159 - -0.5 2,126,208 + -1.6 2,126,266 + MPMX20_02033 0.15 +3.7 2,126,274 - MPMX20_02033 0.15 +1.0 2,126,276 + MPMX20_02033 0.16 +0.0 2,126,292 + MPMX20_02033 0.17 +0.9 2,126,432 - MPMX20_02033 0.32 -1.2 2,126,432 - MPMX20_02033 0.32 -0.7 2,126,443 + MPMX20_02033 0.33 -0.6 2,126,446 - MPMX20_02033 0.34 +1.1 2,126,488 + MPMX20_02033 0.38 -0.5 2,126,512 - MPMX20_02033 0.40 -2.2 2,126,513 + MPMX20_02033 0.41 -1.2 2,126,519 - MPMX20_02033 0.41 -0.2 2,126,637 + MPMX20_02033 0.54 -0.3 2,126,645 - MPMX20_02033 0.54 +0.1 2,126,693 + MPMX20_02033 0.60 -0.3 2,126,741 + MPMX20_02033 0.65 +0.3 2,126,755 - MPMX20_02033 0.66 +0.0 2,126,756 - MPMX20_02033 0.66 -1.1 2,126,800 + MPMX20_02033 0.71 +0.7 2,126,802 - MPMX20_02033 0.71 +0.6 2,126,845 + MPMX20_02033 0.75 -0.3 2,126,853 - MPMX20_02033 0.76 -1.1 2,126,862 + MPMX20_02033 0.77 +1.3 2,126,898 - MPMX20_02033 0.81 +0.4 2,126,898 - MPMX20_02033 0.81 -0.6 2,126,898 - MPMX20_02033 0.81 -0.0 2,126,936 + MPMX20_02033 0.85 -0.1 2,126,957 - MPMX20_02033 0.87 -1.9 2,127,012 + +1.9 2,127,020 - +2.4 2,127,035 + -1.6 2,127,035 + -2.1 2,127,038 - +0.0 2,127,043 - -1.0
Or see this region's nucleotide sequence