Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03299

Experiment: Inosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03298 and MPMX20_03299 are separated by 68 nucleotidesMPMX20_03299 and MPMX20_03300 are separated by 51 nucleotides MPMX20_03298: MPMX20_03298 - Hca operon transcriptional activator HcaR, at 3,467,069 to 3,467,956 _03298 MPMX20_03299: MPMX20_03299 - Xanthosine permease, at 3,468,025 to 3,469,281 _03299 MPMX20_03300: MPMX20_03300 - Purine nucleoside phosphorylase 2, at 3,469,333 to 3,470,157 _03300 Position (kb) 3468 3469 3470Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3467.161 kb on + strand, within MPMX20_03298at 3467.207 kb on + strand, within MPMX20_03298at 3467.392 kb on + strand, within MPMX20_03298at 3467.392 kb on + strand, within MPMX20_03298at 3467.392 kb on + strand, within MPMX20_03298at 3467.421 kb on + strand, within MPMX20_03298at 3467.429 kb on - strand, within MPMX20_03298at 3467.429 kb on - strand, within MPMX20_03298at 3467.429 kb on - strand, within MPMX20_03298at 3467.621 kb on - strand, within MPMX20_03298at 3467.632 kb on + strand, within MPMX20_03298at 3467.638 kb on - strand, within MPMX20_03298at 3467.670 kb on + strand, within MPMX20_03298at 3467.670 kb on + strand, within MPMX20_03298at 3467.670 kb on + strand, within MPMX20_03298at 3467.678 kb on - strand, within MPMX20_03298at 3467.678 kb on - strand, within MPMX20_03298at 3467.678 kb on - strand, within MPMX20_03298at 3467.728 kb on - strand, within MPMX20_03298at 3467.765 kb on + strand, within MPMX20_03298at 3467.765 kb on + strand, within MPMX20_03298at 3467.765 kb on + strand, within MPMX20_03298at 3467.765 kb on + strand, within MPMX20_03298at 3467.773 kb on - strand, within MPMX20_03298at 3467.773 kb on - strand, within MPMX20_03298at 3467.805 kb on + strand, within MPMX20_03298at 3467.813 kb on - strand, within MPMX20_03298at 3467.825 kb on - strand, within MPMX20_03298at 3467.827 kb on + strand, within MPMX20_03298at 3467.933 kb on - strandat 3467.934 kb on - strandat 3467.959 kb on + strandat 3467.968 kb on - strandat 3467.972 kb on + strandat 3467.980 kb on + strandat 3467.992 kb on + strandat 3467.992 kb on + strandat 3468.000 kb on - strandat 3468.000 kb on - strandat 3468.000 kb on - strandat 3468.187 kb on + strand, within MPMX20_03299at 3468.187 kb on + strand, within MPMX20_03299at 3468.187 kb on + strand, within MPMX20_03299at 3468.195 kb on - strand, within MPMX20_03299at 3468.195 kb on - strand, within MPMX20_03299at 3468.195 kb on - strand, within MPMX20_03299at 3468.238 kb on - strand, within MPMX20_03299at 3468.248 kb on - strand, within MPMX20_03299at 3468.248 kb on - strand, within MPMX20_03299at 3468.326 kb on + strand, within MPMX20_03299at 3468.334 kb on - strand, within MPMX20_03299at 3468.336 kb on + strand, within MPMX20_03299at 3468.362 kb on - strand, within MPMX20_03299at 3468.393 kb on + strand, within MPMX20_03299at 3468.406 kb on + strand, within MPMX20_03299at 3468.414 kb on - strand, within MPMX20_03299at 3468.489 kb on + strand, within MPMX20_03299at 3468.489 kb on + strand, within MPMX20_03299at 3468.489 kb on + strand, within MPMX20_03299at 3468.497 kb on - strand, within MPMX20_03299at 3468.497 kb on - strand, within MPMX20_03299at 3468.497 kb on - strand, within MPMX20_03299at 3468.521 kb on + strand, within MPMX20_03299at 3468.617 kb on + strand, within MPMX20_03299at 3468.625 kb on - strand, within MPMX20_03299at 3468.656 kb on - strand, within MPMX20_03299at 3468.671 kb on - strand, within MPMX20_03299at 3468.695 kb on - strand, within MPMX20_03299at 3468.716 kb on + strand, within MPMX20_03299at 3468.724 kb on - strand, within MPMX20_03299at 3468.760 kb on - strand, within MPMX20_03299at 3468.813 kb on + strand, within MPMX20_03299at 3468.821 kb on - strand, within MPMX20_03299at 3468.831 kb on - strand, within MPMX20_03299at 3468.901 kb on + strand, within MPMX20_03299at 3468.909 kb on - strand, within MPMX20_03299at 3468.909 kb on - strand, within MPMX20_03299at 3468.909 kb on - strand, within MPMX20_03299at 3468.923 kb on - strand, within MPMX20_03299at 3468.923 kb on - strand, within MPMX20_03299at 3468.974 kb on + strand, within MPMX20_03299at 3468.974 kb on + strand, within MPMX20_03299at 3468.974 kb on + strand, within MPMX20_03299at 3468.982 kb on - strand, within MPMX20_03299at 3468.997 kb on - strand, within MPMX20_03299at 3469.010 kb on + strand, within MPMX20_03299at 3469.018 kb on - strand, within MPMX20_03299at 3469.028 kb on + strand, within MPMX20_03299at 3469.069 kb on + strand, within MPMX20_03299at 3469.073 kb on - strand, within MPMX20_03299at 3469.156 kb on - strandat 3469.159 kb on + strandat 3469.164 kb on + strandat 3469.164 kb on + strandat 3469.217 kb on - strandat 3469.290 kb on + strandat 3469.290 kb on + strandat 3469.365 kb on + strandat 3469.430 kb on - strand, within MPMX20_03300at 3469.432 kb on + strand, within MPMX20_03300at 3469.440 kb on - strand, within MPMX20_03300at 3469.449 kb on + strand, within MPMX20_03300at 3469.485 kb on - strand, within MPMX20_03300at 3469.564 kb on - strand, within MPMX20_03300at 3469.582 kb on - strand, within MPMX20_03300at 3469.600 kb on - strand, within MPMX20_03300at 3469.616 kb on - strand, within MPMX20_03300at 3469.646 kb on + strand, within MPMX20_03300at 3469.656 kb on - strand, within MPMX20_03300at 3469.831 kb on - strand, within MPMX20_03300at 3469.831 kb on - strand, within MPMX20_03300at 3469.836 kb on - strand, within MPMX20_03300at 3469.851 kb on - strand, within MPMX20_03300at 3469.898 kb on + strand, within MPMX20_03300at 3469.975 kb on + strand, within MPMX20_03300at 3470.022 kb on + strand, within MPMX20_03300at 3470.025 kb on - strand, within MPMX20_03300at 3470.030 kb on - strand, within MPMX20_03300at 3470.030 kb on - strand, within MPMX20_03300at 3470.064 kb on - strand, within MPMX20_03300at 3470.069 kb on - strand, within MPMX20_03300at 3470.202 kb on + strandat 3470.210 kb on - strandat 3470.210 kb on - strandat 3470.265 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine (C)
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3,467,161 + MPMX20_03298 0.10 +2.5
3,467,207 + MPMX20_03298 0.16 -0.3
3,467,392 + MPMX20_03298 0.36 -0.8
3,467,392 + MPMX20_03298 0.36 -0.8
3,467,392 + MPMX20_03298 0.36 -0.4
3,467,421 + MPMX20_03298 0.40 -0.2
3,467,429 - MPMX20_03298 0.41 +1.2
3,467,429 - MPMX20_03298 0.41 +0.2
3,467,429 - MPMX20_03298 0.41 -0.2
3,467,621 - MPMX20_03298 0.62 +2.2
3,467,632 + MPMX20_03298 0.63 -1.0
3,467,638 - MPMX20_03298 0.64 -0.4
3,467,670 + MPMX20_03298 0.68 -1.5
3,467,670 + MPMX20_03298 0.68 +0.5
3,467,670 + MPMX20_03298 0.68 -0.1
3,467,678 - MPMX20_03298 0.69 -1.2
3,467,678 - MPMX20_03298 0.69 +0.6
3,467,678 - MPMX20_03298 0.69 -0.8
3,467,728 - MPMX20_03298 0.74 -0.7
3,467,765 + MPMX20_03298 0.78 +0.7
3,467,765 + MPMX20_03298 0.78 -0.6
3,467,765 + MPMX20_03298 0.78 -0.4
3,467,765 + MPMX20_03298 0.78 +0.6
3,467,773 - MPMX20_03298 0.79 +2.1
3,467,773 - MPMX20_03298 0.79 +0.4
3,467,805 + MPMX20_03298 0.83 +0.3
3,467,813 - MPMX20_03298 0.84 +0.1
3,467,825 - MPMX20_03298 0.85 -0.2
3,467,827 + MPMX20_03298 0.85 +0.5
3,467,933 - +0.9
3,467,934 - +0.3
3,467,959 + -0.4
3,467,968 - +0.0
3,467,972 + -0.7
3,467,980 + -2.7
3,467,992 + -0.5
3,467,992 + +0.4
3,468,000 - -0.6
3,468,000 - +1.3
3,468,000 - -1.1
3,468,187 + MPMX20_03299 0.13 +0.5
3,468,187 + MPMX20_03299 0.13 -0.3
3,468,187 + MPMX20_03299 0.13 -0.1
3,468,195 - MPMX20_03299 0.14 +1.1
3,468,195 - MPMX20_03299 0.14 -0.2
3,468,195 - MPMX20_03299 0.14 +0.5
3,468,238 - MPMX20_03299 0.17 -0.5
3,468,248 - MPMX20_03299 0.18 +0.5
3,468,248 - MPMX20_03299 0.18 -0.8
3,468,326 + MPMX20_03299 0.24 +0.3
3,468,334 - MPMX20_03299 0.25 +0.2
3,468,336 + MPMX20_03299 0.25 -0.1
3,468,362 - MPMX20_03299 0.27 +0.1
3,468,393 + MPMX20_03299 0.29 +0.2
3,468,406 + MPMX20_03299 0.30 -0.2
3,468,414 - MPMX20_03299 0.31 +0.3
3,468,489 + MPMX20_03299 0.37 -0.1
3,468,489 + MPMX20_03299 0.37 -1.2
3,468,489 + MPMX20_03299 0.37 +0.7
3,468,497 - MPMX20_03299 0.38 -0.2
3,468,497 - MPMX20_03299 0.38 +0.1
3,468,497 - MPMX20_03299 0.38 -1.0
3,468,521 + MPMX20_03299 0.39 -0.0
3,468,617 + MPMX20_03299 0.47 +0.3
3,468,625 - MPMX20_03299 0.48 -1.2
3,468,656 - MPMX20_03299 0.50 +0.5
3,468,671 - MPMX20_03299 0.51 -0.0
3,468,695 - MPMX20_03299 0.53 +0.4
3,468,716 + MPMX20_03299 0.55 -0.2
3,468,724 - MPMX20_03299 0.56 +0.4
3,468,760 - MPMX20_03299 0.58 -0.9
3,468,813 + MPMX20_03299 0.63 -1.3
3,468,821 - MPMX20_03299 0.63 +0.5
3,468,831 - MPMX20_03299 0.64 +0.2
3,468,901 + MPMX20_03299 0.70 -0.9
3,468,909 - MPMX20_03299 0.70 +1.2
3,468,909 - MPMX20_03299 0.70 -0.5
3,468,909 - MPMX20_03299 0.70 -0.1
3,468,923 - MPMX20_03299 0.71 -0.0
3,468,923 - MPMX20_03299 0.71 +0.1
3,468,974 + MPMX20_03299 0.75 +0.7
3,468,974 + MPMX20_03299 0.75 +0.4
3,468,974 + MPMX20_03299 0.75 -0.4
3,468,982 - MPMX20_03299 0.76 -1.6
3,468,997 - MPMX20_03299 0.77 +0.2
3,469,010 + MPMX20_03299 0.78 +0.6
3,469,018 - MPMX20_03299 0.79 -0.5
3,469,028 + MPMX20_03299 0.80 +0.0
3,469,069 + MPMX20_03299 0.83 +0.8
3,469,073 - MPMX20_03299 0.83 +0.2
3,469,156 - +0.0
3,469,159 + +1.1
3,469,164 + -0.7
3,469,164 + +0.0
3,469,217 - +0.5
3,469,290 + -0.1
3,469,290 + -0.4
3,469,365 + -0.3
3,469,430 - MPMX20_03300 0.12 +3.4
3,469,432 + MPMX20_03300 0.12 -0.2
3,469,440 - MPMX20_03300 0.13 +3.0
3,469,449 + MPMX20_03300 0.14 +0.6
3,469,485 - MPMX20_03300 0.18 +3.0
3,469,564 - MPMX20_03300 0.28 +2.3
3,469,582 - MPMX20_03300 0.30 +2.5
3,469,600 - MPMX20_03300 0.32 +3.0
3,469,616 - MPMX20_03300 0.34 +2.7
3,469,646 + MPMX20_03300 0.38 -0.1
3,469,656 - MPMX20_03300 0.39 +2.4
3,469,831 - MPMX20_03300 0.60 +1.6
3,469,831 - MPMX20_03300 0.60 +1.4
3,469,836 - MPMX20_03300 0.61 +2.3
3,469,851 - MPMX20_03300 0.63 +1.7
3,469,898 + MPMX20_03300 0.68 +0.6
3,469,975 + MPMX20_03300 0.78 +0.4
3,470,022 + MPMX20_03300 0.84 -1.7
3,470,025 - MPMX20_03300 0.84 -0.3
3,470,030 - MPMX20_03300 0.84 +1.4
3,470,030 - MPMX20_03300 0.84 +1.3
3,470,064 - MPMX20_03300 0.89 +0.0
3,470,069 - MPMX20_03300 0.89 +2.0
3,470,202 + +0.9
3,470,210 - +2.3
3,470,210 - +1.1
3,470,265 - +0.5

Or see this region's nucleotide sequence