Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01976

Experiment: Inosine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_01975 and MPMX20_01976 are separated by 299 nucleotidesMPMX20_01976 and MPMX20_01977 are separated by 115 nucleotides MPMX20_01975: MPMX20_01975 - Cyclopropane-fatty-acyl-phospholipid synthase, at 2,066,221 to 2,067,369 _01975 MPMX20_01976: MPMX20_01976 - Inner membrane transport protein YdhC, at 2,067,669 to 2,068,868 _01976 MPMX20_01977: MPMX20_01977 - putative HTH-type transcriptional regulator YahB, at 2,068,984 to 2,069,895 _01977 Position (kb) 2067 2068 2069Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2066.691 kb on + strand, within MPMX20_01975at 2066.702 kb on + strand, within MPMX20_01975at 2066.710 kb on - strand, within MPMX20_01975at 2066.801 kb on + strand, within MPMX20_01975at 2066.801 kb on + strand, within MPMX20_01975at 2066.801 kb on + strand, within MPMX20_01975at 2066.809 kb on - strand, within MPMX20_01975at 2066.809 kb on - strand, within MPMX20_01975at 2066.837 kb on - strand, within MPMX20_01975at 2066.838 kb on + strand, within MPMX20_01975at 2066.846 kb on - strand, within MPMX20_01975at 2066.879 kb on - strand, within MPMX20_01975at 2066.904 kb on + strand, within MPMX20_01975at 2066.928 kb on + strand, within MPMX20_01975at 2066.929 kb on + strand, within MPMX20_01975at 2066.938 kb on - strand, within MPMX20_01975at 2066.948 kb on - strand, within MPMX20_01975at 2066.979 kb on + strand, within MPMX20_01975at 2066.984 kb on + strand, within MPMX20_01975at 2066.984 kb on + strand, within MPMX20_01975at 2066.992 kb on - strand, within MPMX20_01975at 2066.994 kb on + strand, within MPMX20_01975at 2066.994 kb on + strand, within MPMX20_01975at 2066.994 kb on - strand, within MPMX20_01975at 2067.002 kb on - strand, within MPMX20_01975at 2067.002 kb on - strand, within MPMX20_01975at 2067.168 kb on + strand, within MPMX20_01975at 2067.168 kb on + strand, within MPMX20_01975at 2067.176 kb on - strand, within MPMX20_01975at 2067.192 kb on + strand, within MPMX20_01975at 2067.198 kb on + strand, within MPMX20_01975at 2067.198 kb on + strand, within MPMX20_01975at 2067.198 kb on + strand, within MPMX20_01975at 2067.250 kb on - strand, within MPMX20_01975at 2067.281 kb on - strandat 2067.295 kb on + strandat 2067.295 kb on + strandat 2067.295 kb on + strandat 2067.295 kb on + strandat 2067.303 kb on - strandat 2067.303 kb on - strandat 2067.323 kb on - strandat 2067.331 kb on - strandat 2067.372 kb on - strandat 2067.372 kb on - strandat 2067.372 kb on - strandat 2067.382 kb on + strandat 2067.390 kb on - strandat 2067.392 kb on + strandat 2067.400 kb on + strandat 2067.400 kb on + strandat 2067.400 kb on + strandat 2067.400 kb on + strandat 2067.408 kb on - strandat 2067.408 kb on - strandat 2067.418 kb on - strandat 2067.455 kb on - strandat 2067.473 kb on + strandat 2067.478 kb on + strandat 2067.478 kb on + strandat 2067.478 kb on + strandat 2067.481 kb on - strandat 2067.483 kb on + strandat 2067.483 kb on + strandat 2067.483 kb on + strandat 2067.486 kb on - strandat 2067.491 kb on - strandat 2067.583 kb on + strandat 2067.682 kb on + strandat 2067.718 kb on + strandat 2067.752 kb on + strandat 2067.765 kb on - strandat 2067.781 kb on - strandat 2067.819 kb on - strand, within MPMX20_01976at 2067.823 kb on - strand, within MPMX20_01976at 2067.823 kb on - strand, within MPMX20_01976at 2067.834 kb on + strand, within MPMX20_01976at 2067.842 kb on - strand, within MPMX20_01976at 2067.855 kb on + strand, within MPMX20_01976at 2067.885 kb on - strand, within MPMX20_01976at 2067.903 kb on + strand, within MPMX20_01976at 2067.906 kb on - strand, within MPMX20_01976at 2067.911 kb on - strand, within MPMX20_01976at 2068.011 kb on + strand, within MPMX20_01976at 2068.012 kb on - strand, within MPMX20_01976at 2068.018 kb on + strand, within MPMX20_01976at 2068.145 kb on - strand, within MPMX20_01976at 2068.145 kb on - strand, within MPMX20_01976at 2068.233 kb on + strand, within MPMX20_01976at 2068.236 kb on - strand, within MPMX20_01976at 2068.269 kb on - strand, within MPMX20_01976at 2068.275 kb on + strand, within MPMX20_01976at 2068.327 kb on - strand, within MPMX20_01976at 2068.348 kb on + strand, within MPMX20_01976at 2068.441 kb on + strand, within MPMX20_01976at 2068.449 kb on - strand, within MPMX20_01976at 2068.450 kb on - strand, within MPMX20_01976at 2068.484 kb on + strand, within MPMX20_01976at 2068.517 kb on + strand, within MPMX20_01976at 2068.607 kb on + strand, within MPMX20_01976at 2068.692 kb on - strand, within MPMX20_01976at 2068.704 kb on + strand, within MPMX20_01976at 2068.712 kb on - strand, within MPMX20_01976at 2068.732 kb on - strand, within MPMX20_01976at 2068.733 kb on - strand, within MPMX20_01976at 2068.794 kb on + strandat 2068.794 kb on + strandat 2068.823 kb on + strandat 2068.824 kb on + strandat 2068.896 kb on - strandat 2068.909 kb on + strandat 2068.909 kb on + strandat 2068.909 kb on + strandat 2068.910 kb on + strandat 2068.911 kb on + strandat 2068.911 kb on + strandat 2068.911 kb on + strandat 2068.918 kb on - strandat 2068.919 kb on - strandat 2068.920 kb on + strandat 2068.920 kb on + strandat 2068.928 kb on - strandat 2068.928 kb on - strandat 2069.015 kb on + strandat 2069.044 kb on - strandat 2069.092 kb on - strand, within MPMX20_01977at 2069.136 kb on + strand, within MPMX20_01977at 2069.219 kb on + strand, within MPMX20_01977at 2069.219 kb on + strand, within MPMX20_01977at 2069.378 kb on - strand, within MPMX20_01977at 2069.378 kb on - strand, within MPMX20_01977at 2069.413 kb on - strand, within MPMX20_01977at 2069.458 kb on + strand, within MPMX20_01977at 2069.481 kb on - strand, within MPMX20_01977at 2069.521 kb on + strand, within MPMX20_01977at 2069.521 kb on + strand, within MPMX20_01977at 2069.529 kb on - strand, within MPMX20_01977at 2069.529 kb on - strand, within MPMX20_01977at 2069.529 kb on - strand, within MPMX20_01977at 2069.606 kb on - strand, within MPMX20_01977at 2069.620 kb on - strand, within MPMX20_01977at 2069.678 kb on + strand, within MPMX20_01977at 2069.678 kb on + strand, within MPMX20_01977at 2069.681 kb on - strand, within MPMX20_01977at 2069.686 kb on - strand, within MPMX20_01977at 2069.686 kb on - strand, within MPMX20_01977at 2069.721 kb on + strand, within MPMX20_01977at 2069.721 kb on + strand, within MPMX20_01977at 2069.729 kb on - strand, within MPMX20_01977at 2069.752 kb on - strand, within MPMX20_01977at 2069.752 kb on - strand, within MPMX20_01977at 2069.817 kb on - strandat 2069.834 kb on - strandat 2069.834 kb on - strandat 2069.834 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Inosine (C)
remove
2,066,691 + MPMX20_01975 0.41 +0.1
2,066,702 + MPMX20_01975 0.42 +0.7
2,066,710 - MPMX20_01975 0.43 -1.3
2,066,801 + MPMX20_01975 0.50 +0.0
2,066,801 + MPMX20_01975 0.50 -0.9
2,066,801 + MPMX20_01975 0.50 -1.5
2,066,809 - MPMX20_01975 0.51 -0.0
2,066,809 - MPMX20_01975 0.51 -1.1
2,066,837 - MPMX20_01975 0.54 +0.4
2,066,838 + MPMX20_01975 0.54 -1.2
2,066,846 - MPMX20_01975 0.54 -0.4
2,066,879 - MPMX20_01975 0.57 +0.6
2,066,904 + MPMX20_01975 0.59 -0.8
2,066,928 + MPMX20_01975 0.62 -0.5
2,066,929 + MPMX20_01975 0.62 -0.5
2,066,938 - MPMX20_01975 0.62 +1.4
2,066,948 - MPMX20_01975 0.63 +0.3
2,066,979 + MPMX20_01975 0.66 +0.4
2,066,984 + MPMX20_01975 0.66 -1.6
2,066,984 + MPMX20_01975 0.66 +0.4
2,066,992 - MPMX20_01975 0.67 -1.7
2,066,994 + MPMX20_01975 0.67 +0.2
2,066,994 + MPMX20_01975 0.67 +0.4
2,066,994 - MPMX20_01975 0.67 -0.0
2,067,002 - MPMX20_01975 0.68 -0.0
2,067,002 - MPMX20_01975 0.68 -0.5
2,067,168 + MPMX20_01975 0.82 +1.1
2,067,168 + MPMX20_01975 0.82 +0.4
2,067,176 - MPMX20_01975 0.83 +0.8
2,067,192 + MPMX20_01975 0.85 +1.0
2,067,198 + MPMX20_01975 0.85 -0.1
2,067,198 + MPMX20_01975 0.85 +0.3
2,067,198 + MPMX20_01975 0.85 +1.1
2,067,250 - MPMX20_01975 0.90 -0.3
2,067,281 - +0.5
2,067,295 + -0.1
2,067,295 + -1.3
2,067,295 + -0.9
2,067,295 + -0.5
2,067,303 - +0.5
2,067,303 - +0.5
2,067,323 - -0.1
2,067,331 - +1.1
2,067,372 - -1.5
2,067,372 - -1.8
2,067,372 - -0.5
2,067,382 + +1.4
2,067,390 - +0.4
2,067,392 + +0.8
2,067,400 + +0.1
2,067,400 + -0.3
2,067,400 + +1.3
2,067,400 + -0.6
2,067,408 - +0.0
2,067,408 - +2.1
2,067,418 - +0.7
2,067,455 - -2.5
2,067,473 + -0.7
2,067,478 + +0.1
2,067,478 + +0.9
2,067,478 + +1.0
2,067,481 - +1.3
2,067,483 + +0.9
2,067,483 + -1.9
2,067,483 + +0.2
2,067,486 - -0.5
2,067,491 - +0.1
2,067,583 + -2.0
2,067,682 + -1.1
2,067,718 + -1.7
2,067,752 + -0.5
2,067,765 - -2.6
2,067,781 - -1.7
2,067,819 - MPMX20_01976 0.12 -1.4
2,067,823 - MPMX20_01976 0.13 -2.4
2,067,823 - MPMX20_01976 0.13 -2.9
2,067,834 + MPMX20_01976 0.14 -0.8
2,067,842 - MPMX20_01976 0.14 -1.9
2,067,855 + MPMX20_01976 0.15 -1.5
2,067,885 - MPMX20_01976 0.18 -3.2
2,067,903 + MPMX20_01976 0.20 -0.5
2,067,906 - MPMX20_01976 0.20 -3.0
2,067,911 - MPMX20_01976 0.20 -2.2
2,068,011 + MPMX20_01976 0.28 -2.9
2,068,012 - MPMX20_01976 0.29 -2.3
2,068,018 + MPMX20_01976 0.29 -2.4
2,068,145 - MPMX20_01976 0.40 -2.8
2,068,145 - MPMX20_01976 0.40 -2.7
2,068,233 + MPMX20_01976 0.47 -3.1
2,068,236 - MPMX20_01976 0.47 -4.0
2,068,269 - MPMX20_01976 0.50 -3.5
2,068,275 + MPMX20_01976 0.51 +0.1
2,068,327 - MPMX20_01976 0.55 -2.3
2,068,348 + MPMX20_01976 0.57 -1.3
2,068,441 + MPMX20_01976 0.64 -3.3
2,068,449 - MPMX20_01976 0.65 -3.5
2,068,450 - MPMX20_01976 0.65 -2.7
2,068,484 + MPMX20_01976 0.68 -2.0
2,068,517 + MPMX20_01976 0.71 -2.3
2,068,607 + MPMX20_01976 0.78 -3.1
2,068,692 - MPMX20_01976 0.85 -3.0
2,068,704 + MPMX20_01976 0.86 -1.8
2,068,712 - MPMX20_01976 0.87 -3.6
2,068,732 - MPMX20_01976 0.89 -1.3
2,068,733 - MPMX20_01976 0.89 -0.4
2,068,794 + -3.6
2,068,794 + -2.7
2,068,823 + -2.2
2,068,824 + -2.3
2,068,896 - +0.1
2,068,909 + -2.0
2,068,909 + -2.3
2,068,909 + -3.0
2,068,910 + -2.5
2,068,911 + -0.9
2,068,911 + -1.8
2,068,911 + -0.5
2,068,918 - +1.1
2,068,919 - +1.0
2,068,920 + -3.0
2,068,920 + -1.2
2,068,928 - -1.3
2,068,928 - +0.5
2,069,015 + -2.7
2,069,044 - -1.3
2,069,092 - MPMX20_01977 0.12 -1.9
2,069,136 + MPMX20_01977 0.17 -1.4
2,069,219 + MPMX20_01977 0.26 -3.3
2,069,219 + MPMX20_01977 0.26 -3.2
2,069,378 - MPMX20_01977 0.43 -0.9
2,069,378 - MPMX20_01977 0.43 -3.0
2,069,413 - MPMX20_01977 0.47 -3.1
2,069,458 + MPMX20_01977 0.52 -1.7
2,069,481 - MPMX20_01977 0.54 -3.1
2,069,521 + MPMX20_01977 0.59 -3.1
2,069,521 + MPMX20_01977 0.59 -0.5
2,069,529 - MPMX20_01977 0.60 -2.4
2,069,529 - MPMX20_01977 0.60 -2.6
2,069,529 - MPMX20_01977 0.60 -3.6
2,069,606 - MPMX20_01977 0.68 -3.2
2,069,620 - MPMX20_01977 0.70 -4.1
2,069,678 + MPMX20_01977 0.76 -3.9
2,069,678 + MPMX20_01977 0.76 -2.5
2,069,681 - MPMX20_01977 0.76 -2.5
2,069,686 - MPMX20_01977 0.77 -1.8
2,069,686 - MPMX20_01977 0.77 -0.6
2,069,721 + MPMX20_01977 0.81 -1.4
2,069,721 + MPMX20_01977 0.81 -2.9
2,069,729 - MPMX20_01977 0.82 -1.9
2,069,752 - MPMX20_01977 0.84 -2.8
2,069,752 - MPMX20_01977 0.84 -2.0
2,069,817 - -0.1
2,069,834 - -2.8
2,069,834 - -2.5
2,069,834 - -3.5

Or see this region's nucleotide sequence