Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00544

Experiment: Inosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00542 and MPMX20_00543 are separated by 74 nucleotidesMPMX20_00543 and MPMX20_00544 are separated by 12 nucleotidesMPMX20_00544 and MPMX20_00545 are separated by 239 nucleotidesMPMX20_00545 and MPMX20_00546 are separated by 71 nucleotides MPMX20_00542: MPMX20_00542 - 2-iminobutanoate/2-iminopropanoate deaminase, at 565,751 to 566,137 _00542 MPMX20_00543: MPMX20_00543 - Aspartate carbamoyltransferase regulatory chain, at 566,212 to 566,673 _00543 MPMX20_00544: MPMX20_00544 - Aspartate carbamoyltransferase catalytic subunit, at 566,686 to 567,618 _00544 MPMX20_00545: MPMX20_00545 - Arginine repressor, at 567,858 to 568,346 _00545 MPMX20_00546: MPMX20_00546 - hypothetical protein, at 568,418 to 569,821 _00546 Position (kb) 566 567 568Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 565.723 kb on - strandat 565.799 kb on - strand, within MPMX20_00542at 565.799 kb on - strand, within MPMX20_00542at 565.818 kb on - strand, within MPMX20_00542at 565.828 kb on - strand, within MPMX20_00542at 565.830 kb on + strand, within MPMX20_00542at 565.952 kb on + strand, within MPMX20_00542at 565.952 kb on + strand, within MPMX20_00542at 565.960 kb on - strand, within MPMX20_00542at 565.960 kb on - strand, within MPMX20_00542at 565.960 kb on - strand, within MPMX20_00542at 565.961 kb on + strand, within MPMX20_00542at 566.030 kb on - strand, within MPMX20_00542at 566.066 kb on + strand, within MPMX20_00542at 566.069 kb on - strand, within MPMX20_00542at 566.071 kb on + strand, within MPMX20_00542at 566.074 kb on - strand, within MPMX20_00542at 566.074 kb on - strand, within MPMX20_00542at 566.086 kb on + strand, within MPMX20_00542at 566.094 kb on - strand, within MPMX20_00542at 566.132 kb on + strandat 566.132 kb on + strandat 566.159 kb on + strandat 566.185 kb on - strandat 566.185 kb on - strandat 566.231 kb on - strandat 566.319 kb on + strand, within MPMX20_00543at 566.328 kb on - strand, within MPMX20_00543at 566.345 kb on + strand, within MPMX20_00543at 566.358 kb on - strand, within MPMX20_00543at 566.397 kb on - strand, within MPMX20_00543at 566.397 kb on - strand, within MPMX20_00543at 566.402 kb on + strand, within MPMX20_00543at 566.411 kb on - strand, within MPMX20_00543at 566.444 kb on + strand, within MPMX20_00543at 566.510 kb on - strand, within MPMX20_00543at 566.532 kb on + strand, within MPMX20_00543at 566.546 kb on + strand, within MPMX20_00543at 566.546 kb on - strand, within MPMX20_00543at 566.556 kb on + strand, within MPMX20_00543at 566.556 kb on + strand, within MPMX20_00543at 566.561 kb on + strand, within MPMX20_00543at 566.589 kb on + strand, within MPMX20_00543at 566.594 kb on + strand, within MPMX20_00543at 566.597 kb on - strand, within MPMX20_00543at 566.597 kb on - strand, within MPMX20_00543at 566.604 kb on + strand, within MPMX20_00543at 566.612 kb on - strand, within MPMX20_00543at 566.665 kb on - strandat 566.725 kb on + strandat 566.727 kb on - strandat 566.765 kb on - strandat 566.790 kb on + strand, within MPMX20_00544at 566.798 kb on - strand, within MPMX20_00544at 566.882 kb on - strand, within MPMX20_00544at 566.882 kb on - strand, within MPMX20_00544at 566.885 kb on + strand, within MPMX20_00544at 566.893 kb on - strand, within MPMX20_00544at 566.960 kb on + strand, within MPMX20_00544at 566.998 kb on - strand, within MPMX20_00544at 567.024 kb on - strand, within MPMX20_00544at 567.095 kb on + strand, within MPMX20_00544at 567.108 kb on + strand, within MPMX20_00544at 567.149 kb on + strand, within MPMX20_00544at 567.169 kb on + strand, within MPMX20_00544at 567.169 kb on + strand, within MPMX20_00544at 567.177 kb on - strand, within MPMX20_00544at 567.177 kb on - strand, within MPMX20_00544at 567.177 kb on - strand, within MPMX20_00544at 567.180 kb on + strand, within MPMX20_00544at 567.203 kb on - strand, within MPMX20_00544at 567.339 kb on + strand, within MPMX20_00544at 567.383 kb on + strand, within MPMX20_00544at 567.435 kb on - strand, within MPMX20_00544at 567.445 kb on + strand, within MPMX20_00544at 567.554 kb on + strandat 567.562 kb on - strandat 567.572 kb on - strandat 567.651 kb on + strandat 567.654 kb on + strandat 567.706 kb on - strandat 567.722 kb on - strandat 567.732 kb on + strandat 567.732 kb on + strandat 567.739 kb on - strandat 567.747 kb on + strandat 567.755 kb on - strandat 567.917 kb on + strand, within MPMX20_00545at 567.917 kb on - strand, within MPMX20_00545at 567.945 kb on - strand, within MPMX20_00545at 568.015 kb on - strand, within MPMX20_00545at 568.016 kb on - strand, within MPMX20_00545at 568.020 kb on - strand, within MPMX20_00545at 568.042 kb on - strand, within MPMX20_00545at 568.047 kb on + strand, within MPMX20_00545at 568.047 kb on + strand, within MPMX20_00545at 568.047 kb on + strand, within MPMX20_00545at 568.102 kb on + strand, within MPMX20_00545at 568.110 kb on - strand, within MPMX20_00545at 568.207 kb on - strand, within MPMX20_00545at 568.216 kb on - strand, within MPMX20_00545at 568.229 kb on - strand, within MPMX20_00545at 568.263 kb on - strand, within MPMX20_00545at 568.297 kb on - strand, within MPMX20_00545at 568.305 kb on + strandat 568.359 kb on + strandat 568.359 kb on - strandat 568.382 kb on + strandat 568.443 kb on - strandat 568.572 kb on - strand, within MPMX20_00546at 568.588 kb on + strand, within MPMX20_00546at 568.588 kb on + strand, within MPMX20_00546at 568.600 kb on + strand, within MPMX20_00546at 568.601 kb on - strand, within MPMX20_00546at 568.606 kb on + strand, within MPMX20_00546at 568.606 kb on + strand, within MPMX20_00546at 568.611 kb on + strand, within MPMX20_00546at 568.611 kb on + strand, within MPMX20_00546at 568.613 kb on + strand, within MPMX20_00546

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine (C)
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565,723 - +0.4
565,799 - MPMX20_00542 0.12 +0.5
565,799 - MPMX20_00542 0.12 -2.9
565,818 - MPMX20_00542 0.17 +0.1
565,828 - MPMX20_00542 0.20 -1.6
565,830 + MPMX20_00542 0.20 +0.4
565,952 + MPMX20_00542 0.52 -1.6
565,952 + MPMX20_00542 0.52 +0.0
565,960 - MPMX20_00542 0.54 -0.7
565,960 - MPMX20_00542 0.54 +0.4
565,960 - MPMX20_00542 0.54 -1.9
565,961 + MPMX20_00542 0.54 +1.5
566,030 - MPMX20_00542 0.72 -0.6
566,066 + MPMX20_00542 0.81 +0.2
566,069 - MPMX20_00542 0.82 -0.4
566,071 + MPMX20_00542 0.83 -1.9
566,074 - MPMX20_00542 0.83 -0.2
566,074 - MPMX20_00542 0.83 -0.5
566,086 + MPMX20_00542 0.87 -0.1
566,094 - MPMX20_00542 0.89 +1.4
566,132 + +0.8
566,132 + -0.6
566,159 + +0.1
566,185 - +1.6
566,185 - -0.3
566,231 - +0.1
566,319 + MPMX20_00543 0.23 -0.6
566,328 - MPMX20_00543 0.25 -0.7
566,345 + MPMX20_00543 0.29 +0.6
566,358 - MPMX20_00543 0.32 +0.9
566,397 - MPMX20_00543 0.40 -0.6
566,397 - MPMX20_00543 0.40 -1.3
566,402 + MPMX20_00543 0.41 +0.1
566,411 - MPMX20_00543 0.43 +0.5
566,444 + MPMX20_00543 0.50 +0.3
566,510 - MPMX20_00543 0.65 +0.0
566,532 + MPMX20_00543 0.69 -0.3
566,546 + MPMX20_00543 0.72 -0.4
566,546 - MPMX20_00543 0.72 +0.3
566,556 + MPMX20_00543 0.74 +0.9
566,556 + MPMX20_00543 0.74 +0.0
566,561 + MPMX20_00543 0.76 -0.5
566,589 + MPMX20_00543 0.82 -0.1
566,594 + MPMX20_00543 0.83 -1.2
566,597 - MPMX20_00543 0.83 -2.4
566,597 - MPMX20_00543 0.83 +1.1
566,604 + MPMX20_00543 0.85 -1.5
566,612 - MPMX20_00543 0.87 -1.1
566,665 - -0.3
566,725 + -2.6
566,727 - -0.8
566,765 - -2.2
566,790 + MPMX20_00544 0.11 -3.8
566,798 - MPMX20_00544 0.12 -0.8
566,882 - MPMX20_00544 0.21 -3.0
566,882 - MPMX20_00544 0.21 -4.2
566,885 + MPMX20_00544 0.21 -2.4
566,893 - MPMX20_00544 0.22 -2.5
566,960 + MPMX20_00544 0.29 -3.9
566,998 - MPMX20_00544 0.33 -2.3
567,024 - MPMX20_00544 0.36 -3.3
567,095 + MPMX20_00544 0.44 -2.8
567,108 + MPMX20_00544 0.45 -3.3
567,149 + MPMX20_00544 0.50 -1.2
567,169 + MPMX20_00544 0.52 -2.8
567,169 + MPMX20_00544 0.52 -4.2
567,177 - MPMX20_00544 0.53 -1.3
567,177 - MPMX20_00544 0.53 -4.2
567,177 - MPMX20_00544 0.53 -2.2
567,180 + MPMX20_00544 0.53 -3.8
567,203 - MPMX20_00544 0.55 -2.2
567,339 + MPMX20_00544 0.70 -4.6
567,383 + MPMX20_00544 0.75 -6.0
567,435 - MPMX20_00544 0.80 -2.5
567,445 + MPMX20_00544 0.81 -0.6
567,554 + -1.4
567,562 - -2.2
567,572 - -1.9
567,651 + -1.8
567,654 + -0.5
567,706 - +0.5
567,722 - -2.0
567,732 + -1.5
567,732 + +1.7
567,739 - +0.2
567,747 + -0.3
567,755 - +1.5
567,917 + MPMX20_00545 0.12 +1.8
567,917 - MPMX20_00545 0.12 +1.6
567,945 - MPMX20_00545 0.18 -1.0
568,015 - MPMX20_00545 0.32 +0.8
568,016 - MPMX20_00545 0.32 -0.2
568,020 - MPMX20_00545 0.33 -0.1
568,042 - MPMX20_00545 0.38 +0.1
568,047 + MPMX20_00545 0.39 -0.6
568,047 + MPMX20_00545 0.39 +0.4
568,047 + MPMX20_00545 0.39 +0.6
568,102 + MPMX20_00545 0.50 -2.4
568,110 - MPMX20_00545 0.52 -1.7
568,207 - MPMX20_00545 0.71 +1.3
568,216 - MPMX20_00545 0.73 +0.3
568,229 - MPMX20_00545 0.76 -0.2
568,263 - MPMX20_00545 0.83 -0.2
568,297 - MPMX20_00545 0.90 +0.4
568,305 + -0.5
568,359 + -1.0
568,359 - +1.0
568,382 + +0.8
568,443 - -1.2
568,572 - MPMX20_00546 0.11 -0.6
568,588 + MPMX20_00546 0.12 -1.0
568,588 + MPMX20_00546 0.12 +0.7
568,600 + MPMX20_00546 0.13 +0.1
568,601 - MPMX20_00546 0.13 -0.3
568,606 + MPMX20_00546 0.13 +0.3
568,606 + MPMX20_00546 0.13 +0.0
568,611 + MPMX20_00546 0.14 -0.6
568,611 + MPMX20_00546 0.14 -0.1
568,613 + MPMX20_00546 0.14 +1.2

Or see this region's nucleotide sequence