Experiment: Uridine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04683 and MPMX20_04684 are separated by 987 nucleotides MPMX20_04684 and MPMX20_04685 are separated by 301 nucleotides MPMX20_04685 and MPMX20_04686 are separated by 131 nucleotides
MPMX20_04683: MPMX20_04683 - hypothetical protein, at 36,532 to 36,885
_04683
MPMX20_04684: MPMX20_04684 - hypothetical protein, at 37,873 to 38,736
_04684
MPMX20_04685: MPMX20_04685 - hypothetical protein, at 39,038 to 39,280
_04685
MPMX20_04686: MPMX20_04686 - Phospholipase D, at 39,412 to 39,792
_04686
Position (kb) 37
38
39 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 36.874 kb on - strand at 36.972 kb on - strand at 37.010 kb on + strand at 37.018 kb on - strand at 37.020 kb on + strand at 37.032 kb on + strand at 37.041 kb on - strand at 37.061 kb on - strand at 37.061 kb on - strand at 37.061 kb on - strand at 37.061 kb on - strand at 37.062 kb on - strand at 37.071 kb on - strand at 37.078 kb on + strand at 37.079 kb on - strand at 37.094 kb on + strand at 37.094 kb on + strand at 37.094 kb on + strand at 37.094 kb on + strand at 37.102 kb on + strand at 37.102 kb on - strand at 37.102 kb on - strand at 37.149 kb on + strand at 37.149 kb on + strand at 37.149 kb on + strand at 37.149 kb on + strand at 37.149 kb on + strand at 37.153 kb on + strand at 37.157 kb on - strand at 37.159 kb on - strand at 37.169 kb on + strand at 37.186 kb on + strand at 37.212 kb on - strand at 37.222 kb on - strand at 37.231 kb on - strand at 37.275 kb on - strand at 37.275 kb on - strand at 37.281 kb on + strand at 37.282 kb on - strand at 37.348 kb on - strand at 37.356 kb on - strand at 37.362 kb on + strand at 37.362 kb on + strand at 37.367 kb on + strand at 37.367 kb on + strand at 37.367 kb on + strand at 37.370 kb on - strand at 37.370 kb on - strand at 37.370 kb on - strand at 37.370 kb on - strand at 37.370 kb on - strand at 37.370 kb on - strand at 37.375 kb on - strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.377 kb on + strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.385 kb on - strand at 37.424 kb on + strand at 37.432 kb on - strand at 37.432 kb on - strand at 37.432 kb on - strand at 37.435 kb on + strand at 37.443 kb on - strand at 37.443 kb on - strand at 37.443 kb on - strand at 37.444 kb on + strand at 37.455 kb on + strand at 37.471 kb on - strand at 37.475 kb on + strand at 37.492 kb on + strand at 37.492 kb on + strand at 37.500 kb on - strand at 37.500 kb on - strand at 37.503 kb on + strand at 37.520 kb on + strand at 37.520 kb on + strand at 37.520 kb on + strand at 37.522 kb on + strand at 37.528 kb on - strand at 37.528 kb on - strand at 37.532 kb on + strand at 37.541 kb on - strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.543 kb on + strand at 37.551 kb on + strand at 37.551 kb on - strand at 37.551 kb on - strand at 37.551 kb on - strand at 37.551 kb on - strand at 37.551 kb on - strand at 37.551 kb on - strand at 37.552 kb on - strand at 37.583 kb on + strand at 37.586 kb on + strand at 37.586 kb on + strand at 37.586 kb on + strand at 37.591 kb on + strand at 37.591 kb on + strand at 37.591 kb on + strand at 37.594 kb on - strand at 37.594 kb on - strand at 37.594 kb on - strand at 37.594 kb on - strand at 37.599 kb on + strand at 37.599 kb on + strand at 37.599 kb on + strand at 37.599 kb on + strand at 37.599 kb on - strand at 37.607 kb on - strand at 37.686 kb on - strand at 37.736 kb on + strand at 37.747 kb on + strand at 37.764 kb on + strand at 37.764 kb on + strand at 37.772 kb on - strand at 37.794 kb on - strand at 37.843 kb on - strand at 37.871 kb on + strand at 37.880 kb on - strand at 37.888 kb on + strand at 37.888 kb on + strand at 37.893 kb on + strand at 37.898 kb on + strand at 37.932 kb on + strand at 37.950 kb on + strand at 37.950 kb on - strand at 38.045 kb on - strand, within MPMX20_04684 at 38.048 kb on - strand, within MPMX20_04684 at 38.063 kb on - strand, within MPMX20_04684 at 38.085 kb on - strand, within MPMX20_04684 at 38.106 kb on + strand, within MPMX20_04684 at 38.162 kb on + strand, within MPMX20_04684 at 38.259 kb on - strand, within MPMX20_04684 at 38.274 kb on - strand, within MPMX20_04684 at 38.277 kb on + strand, within MPMX20_04684 at 38.279 kb on - strand, within MPMX20_04684 at 38.298 kb on + strand, within MPMX20_04684 at 38.306 kb on - strand, within MPMX20_04684 at 38.306 kb on - strand, within MPMX20_04684 at 38.320 kb on + strand, within MPMX20_04684 at 38.328 kb on - strand, within MPMX20_04684 at 38.328 kb on - strand, within MPMX20_04684 at 38.332 kb on - strand, within MPMX20_04684 at 38.397 kb on + strand, within MPMX20_04684 at 38.405 kb on - strand, within MPMX20_04684 at 38.405 kb on - strand, within MPMX20_04684 at 38.450 kb on - strand, within MPMX20_04684 at 38.455 kb on + strand, within MPMX20_04684 at 38.478 kb on + strand, within MPMX20_04684 at 38.498 kb on + strand, within MPMX20_04684 at 38.508 kb on - strand, within MPMX20_04684 at 38.527 kb on + strand, within MPMX20_04684 at 38.552 kb on + strand, within MPMX20_04684 at 38.552 kb on + strand, within MPMX20_04684 at 38.552 kb on + strand, within MPMX20_04684 at 38.560 kb on - strand, within MPMX20_04684 at 38.569 kb on + strand, within MPMX20_04684 at 38.605 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.631 kb on + strand, within MPMX20_04684 at 38.639 kb on - strand, within MPMX20_04684 at 38.639 kb on - strand, within MPMX20_04684 at 38.639 kb on - strand, within MPMX20_04684 at 38.639 kb on - strand, within MPMX20_04684 at 38.639 kb on - strand, within MPMX20_04684 at 38.661 kb on - strand at 38.661 kb on - strand at 38.730 kb on + strand at 38.810 kb on + strand at 38.810 kb on + strand at 38.816 kb on - strand at 38.816 kb on - strand at 38.830 kb on - strand at 38.830 kb on - strand at 38.836 kb on + strand at 38.844 kb on - strand at 38.846 kb on - strand at 38.853 kb on - strand at 38.853 kb on - strand at 38.867 kb on - strand at 38.964 kb on - strand at 38.967 kb on + strand at 39.057 kb on + strand at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.070 kb on + strand, within MPMX20_04685 at 39.078 kb on - strand, within MPMX20_04685 at 39.078 kb on - strand, within MPMX20_04685 at 39.078 kb on - strand, within MPMX20_04685 at 39.101 kb on - strand, within MPMX20_04685 at 39.119 kb on + strand, within MPMX20_04685 at 39.124 kb on - strand, within MPMX20_04685 at 39.205 kb on + strand, within MPMX20_04685 at 39.213 kb on - strand, within MPMX20_04685 at 39.213 kb on - strand, within MPMX20_04685 at 39.213 kb on - strand, within MPMX20_04685 at 39.219 kb on + strand, within MPMX20_04685 at 39.219 kb on + strand, within MPMX20_04685 at 39.219 kb on + strand, within MPMX20_04685 at 39.219 kb on + strand, within MPMX20_04685 at 39.227 kb on - strand, within MPMX20_04685 at 39.289 kb on + strand at 39.289 kb on + strand at 39.289 kb on + strand at 39.295 kb on + strand at 39.320 kb on + strand at 39.328 kb on - strand at 39.377 kb on - strand at 39.377 kb on - strand at 39.383 kb on - strand at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.478 kb on + strand, within MPMX20_04686 at 39.514 kb on + strand, within MPMX20_04686 at 39.546 kb on + strand, within MPMX20_04686 at 39.561 kb on + strand, within MPMX20_04686 at 39.622 kb on - strand, within MPMX20_04686 at 39.622 kb on - strand, within MPMX20_04686 at 39.630 kb on + strand, within MPMX20_04686 at 39.663 kb on - strand, within MPMX20_04686 at 39.687 kb on + strand, within MPMX20_04686 at 39.692 kb on + strand, within MPMX20_04686 at 39.695 kb on - strand, within MPMX20_04686 at 39.716 kb on + strand, within MPMX20_04686 at 39.719 kb on - strand, within MPMX20_04686 at 39.719 kb on - strand, within MPMX20_04686 at 39.723 kb on + strand, within MPMX20_04686 at 39.723 kb on + strand, within MPMX20_04686 at 39.724 kb on - strand, within MPMX20_04686 at 39.724 kb on - strand, within MPMX20_04686 at 39.724 kb on - strand, within MPMX20_04686 at 39.724 kb on - strand, within MPMX20_04686 at 39.731 kb on - strand, within MPMX20_04686
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (C) remove 36,874 - -0.4 36,972 - -0.1 37,010 + +1.7 37,018 - +0.3 37,020 + -1.5 37,032 + -1.9 37,041 - -0.7 37,061 - +0.1 37,061 - +0.3 37,061 - +1.1 37,061 - -0.8 37,062 - +0.8 37,071 - -0.3 37,078 + +0.4 37,079 - -0.8 37,094 + -1.3 37,094 + -0.3 37,094 + -0.4 37,094 + +1.1 37,102 + +0.5 37,102 - +0.1 37,102 - -1.0 37,149 + +1.6 37,149 + +0.5 37,149 + +0.3 37,149 + +0.4 37,149 + -1.4 37,153 + +1.3 37,157 - -0.9 37,159 - +0.7 37,169 + -0.6 37,186 + -1.6 37,212 - +1.1 37,222 - +1.2 37,231 - +0.3 37,275 - +1.8 37,275 - +0.7 37,281 + +0.1 37,282 - -0.0 37,348 - +0.7 37,356 - +0.3 37,362 + -0.2 37,362 + -0.4 37,367 + -0.1 37,367 + -1.1 37,367 + +0.4 37,370 - -0.2 37,370 - -0.9 37,370 - -1.0 37,370 - +1.2 37,370 - +0.5 37,370 - +0.2 37,375 - -0.3 37,377 + +1.0 37,377 + -1.5 37,377 + -1.1 37,377 + +1.3 37,377 + -0.7 37,377 + +0.7 37,377 + -0.2 37,377 + -0.2 37,377 + -0.2 37,377 + +0.7 37,377 + -0.2 37,377 + -0.9 37,377 + -1.0 37,377 + +0.1 37,377 + +2.3 37,385 - +1.7 37,385 - +0.7 37,385 - -1.0 37,385 - -3.3 37,385 - -0.4 37,385 - -1.2 37,385 - +0.9 37,385 - +1.9 37,385 - +1.3 37,424 + -0.7 37,432 - +1.1 37,432 - -0.3 37,432 - +0.4 37,435 + +0.9 37,443 - +0.3 37,443 - -0.0 37,443 - -0.2 37,444 + -0.7 37,455 + +0.4 37,471 - -0.6 37,475 + +0.2 37,492 + +0.5 37,492 + +0.9 37,500 - +0.3 37,500 - +1.5 37,503 + +1.0 37,520 + +2.3 37,520 + +3.5 37,520 + +0.6 37,522 + +0.6 37,528 - -0.6 37,528 - +0.3 37,532 + -0.0 37,541 - -0.9 37,543 + -0.0 37,543 + +1.9 37,543 + -0.6 37,543 + +0.3 37,543 + +0.1 37,543 + -0.4 37,543 + -0.9 37,543 + -0.3 37,551 + +0.1 37,551 - +0.2 37,551 - -1.2 37,551 - +1.2 37,551 - +1.3 37,551 - -0.3 37,551 - -0.1 37,552 - -0.1 37,583 + +0.1 37,586 + +0.6 37,586 + -0.3 37,586 + -1.1 37,591 + -1.3 37,591 + +0.1 37,591 + -0.7 37,594 - +0.6 37,594 - +0.8 37,594 - -1.4 37,594 - -1.6 37,599 + +0.6 37,599 + +0.0 37,599 + -0.1 37,599 + +0.9 37,599 - -3.2 37,607 - -0.5 37,686 - +0.5 37,736 + -1.5 37,747 + +0.3 37,764 + +0.2 37,764 + +0.3 37,772 - +0.1 37,794 - -0.6 37,843 - -1.9 37,871 + -0.9 37,880 - +2.6 37,888 + +0.1 37,888 + -2.4 37,893 + -0.8 37,898 + -0.3 37,932 + -1.6 37,950 + -1.3 37,950 - +2.0 38,045 - MPMX20_04684 0.20 -2.1 38,048 - MPMX20_04684 0.20 -0.1 38,063 - MPMX20_04684 0.22 +0.1 38,085 - MPMX20_04684 0.25 -1.2 38,106 + MPMX20_04684 0.27 -0.1 38,162 + MPMX20_04684 0.33 -1.3 38,259 - MPMX20_04684 0.45 +1.3 38,274 - MPMX20_04684 0.46 -0.9 38,277 + MPMX20_04684 0.47 -1.4 38,279 - MPMX20_04684 0.47 -1.0 38,298 + MPMX20_04684 0.49 -0.6 38,306 - MPMX20_04684 0.50 -0.4 38,306 - MPMX20_04684 0.50 -1.2 38,320 + MPMX20_04684 0.52 -0.1 38,328 - MPMX20_04684 0.53 -1.4 38,328 - MPMX20_04684 0.53 +0.2 38,332 - MPMX20_04684 0.53 -1.4 38,397 + MPMX20_04684 0.61 -0.6 38,405 - MPMX20_04684 0.62 +1.9 38,405 - MPMX20_04684 0.62 -0.6 38,450 - MPMX20_04684 0.67 -1.4 38,455 + MPMX20_04684 0.67 -0.1 38,478 + MPMX20_04684 0.70 -0.3 38,498 + MPMX20_04684 0.72 -2.1 38,508 - MPMX20_04684 0.73 +0.4 38,527 + MPMX20_04684 0.76 -0.7 38,552 + MPMX20_04684 0.79 -2.6 38,552 + MPMX20_04684 0.79 -0.8 38,552 + MPMX20_04684 0.79 -0.1 38,560 - MPMX20_04684 0.80 +0.9 38,569 + MPMX20_04684 0.81 -0.9 38,605 + MPMX20_04684 0.85 -1.1 38,631 + MPMX20_04684 0.88 -2.2 38,631 + MPMX20_04684 0.88 +0.6 38,631 + MPMX20_04684 0.88 -1.0 38,631 + MPMX20_04684 0.88 -0.7 38,631 + MPMX20_04684 0.88 -1.0 38,631 + MPMX20_04684 0.88 -2.6 38,631 + MPMX20_04684 0.88 +2.5 38,639 - MPMX20_04684 0.89 -0.3 38,639 - MPMX20_04684 0.89 -1.8 38,639 - MPMX20_04684 0.89 -1.3 38,639 - MPMX20_04684 0.89 -1.7 38,639 - MPMX20_04684 0.89 -1.0 38,661 - -2.5 38,661 - -1.4 38,730 + -1.7 38,810 + -1.1 38,810 + -0.9 38,816 - -0.7 38,816 - -2.1 38,830 - -1.0 38,830 - -1.4 38,836 + +0.1 38,844 - -0.8 38,846 - +1.1 38,853 - -0.1 38,853 - -0.9 38,867 - -1.8 38,964 - -2.1 38,967 + +0.6 39,057 + -0.6 39,070 + MPMX20_04685 0.13 -0.8 39,070 + MPMX20_04685 0.13 -1.6 39,070 + MPMX20_04685 0.13 -0.9 39,070 + MPMX20_04685 0.13 -0.2 39,070 + MPMX20_04685 0.13 -1.3 39,070 + MPMX20_04685 0.13 -0.6 39,070 + MPMX20_04685 0.13 +0.3 39,070 + MPMX20_04685 0.13 -0.6 39,070 + MPMX20_04685 0.13 +1.3 39,078 - MPMX20_04685 0.16 -2.7 39,078 - MPMX20_04685 0.16 -0.8 39,078 - MPMX20_04685 0.16 -1.5 39,101 - MPMX20_04685 0.26 -0.6 39,119 + MPMX20_04685 0.33 +0.1 39,124 - MPMX20_04685 0.35 -0.6 39,205 + MPMX20_04685 0.69 -2.3 39,213 - MPMX20_04685 0.72 -0.6 39,213 - MPMX20_04685 0.72 -2.9 39,213 - MPMX20_04685 0.72 -1.8 39,219 + MPMX20_04685 0.74 -0.4 39,219 + MPMX20_04685 0.74 +0.7 39,219 + MPMX20_04685 0.74 +0.6 39,219 + MPMX20_04685 0.74 -0.8 39,227 - MPMX20_04685 0.78 -0.3 39,289 + +1.0 39,289 + -0.4 39,289 + -0.0 39,295 + -0.1 39,320 + -0.8 39,328 - +1.5 39,377 - -1.0 39,377 - +0.3 39,383 - -1.3 39,478 + MPMX20_04686 0.17 -0.2 39,478 + MPMX20_04686 0.17 +2.0 39,478 + MPMX20_04686 0.17 -0.4 39,478 + MPMX20_04686 0.17 +0.6 39,478 + MPMX20_04686 0.17 +0.1 39,478 + MPMX20_04686 0.17 -1.1 39,478 + MPMX20_04686 0.17 +0.7 39,478 + MPMX20_04686 0.17 +0.9 39,478 + MPMX20_04686 0.17 -1.0 39,478 + MPMX20_04686 0.17 -0.2 39,514 + MPMX20_04686 0.27 +0.5 39,546 + MPMX20_04686 0.35 +0.1 39,561 + MPMX20_04686 0.39 -1.4 39,622 - MPMX20_04686 0.55 -3.8 39,622 - MPMX20_04686 0.55 -1.1 39,630 + MPMX20_04686 0.57 -0.8 39,663 - MPMX20_04686 0.66 -0.7 39,687 + MPMX20_04686 0.72 -0.2 39,692 + MPMX20_04686 0.73 +1.1 39,695 - MPMX20_04686 0.74 -0.1 39,716 + MPMX20_04686 0.80 -0.9 39,719 - MPMX20_04686 0.81 -3.7 39,719 - MPMX20_04686 0.81 -3.0 39,723 + MPMX20_04686 0.82 +0.7 39,723 + MPMX20_04686 0.82 +1.1 39,724 - MPMX20_04686 0.82 -1.3 39,724 - MPMX20_04686 0.82 -2.1 39,724 - MPMX20_04686 0.82 -0.7 39,724 - MPMX20_04686 0.82 -1.9 39,731 - MPMX20_04686 0.84 -4.1
Or see this region's nucleotide sequence