Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00677

Experiment: Uridine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00676 and MPMX20_00677 overlap by 4 nucleotidesMPMX20_00677 and MPMX20_00678 overlap by 6 nucleotidesMPMX20_00678 and MPMX20_00679 overlap by 26 nucleotides MPMX20_00676: MPMX20_00676 - hypothetical protein, at 694,179 to 695,231 _00676 MPMX20_00677: MPMX20_00677 - putative metal-dependent hydrolase YjjV, at 695,228 to 696,010 _00677 MPMX20_00678: MPMX20_00678 - Putative glycyl-radical enzyme activating enzyme YjjW, at 696,005 to 696,865 _00678 MPMX20_00679: MPMX20_00679 - putative protein YjjI, at 696,840 to 698,387 _00679 Position (kb) 695 696 697Strain fitness (log2 ratio) -2 -1 0 1 2 3at 694.233 kb on - strandat 694.259 kb on + strandat 694.259 kb on + strandat 694.267 kb on - strandat 694.270 kb on - strandat 694.376 kb on + strand, within MPMX20_00676at 694.383 kb on + strand, within MPMX20_00676at 694.383 kb on + strand, within MPMX20_00676at 694.389 kb on - strand, within MPMX20_00676at 694.391 kb on - strand, within MPMX20_00676at 694.427 kb on + strand, within MPMX20_00676at 694.499 kb on - strand, within MPMX20_00676at 694.516 kb on + strand, within MPMX20_00676at 694.541 kb on + strand, within MPMX20_00676at 694.549 kb on - strand, within MPMX20_00676at 694.605 kb on - strand, within MPMX20_00676at 694.617 kb on + strand, within MPMX20_00676at 694.701 kb on + strand, within MPMX20_00676at 694.783 kb on + strand, within MPMX20_00676at 694.791 kb on - strand, within MPMX20_00676at 694.822 kb on + strand, within MPMX20_00676at 694.825 kb on - strand, within MPMX20_00676at 694.827 kb on + strand, within MPMX20_00676at 694.835 kb on - strand, within MPMX20_00676at 694.855 kb on + strand, within MPMX20_00676at 694.860 kb on + strand, within MPMX20_00676at 694.868 kb on - strand, within MPMX20_00676at 694.868 kb on - strand, within MPMX20_00676at 694.868 kb on - strand, within MPMX20_00676at 694.883 kb on + strand, within MPMX20_00676at 694.886 kb on - strand, within MPMX20_00676at 694.952 kb on - strand, within MPMX20_00676at 694.955 kb on + strand, within MPMX20_00676at 694.996 kb on + strand, within MPMX20_00676at 694.996 kb on + strand, within MPMX20_00676at 695.001 kb on + strand, within MPMX20_00676at 695.006 kb on + strand, within MPMX20_00676at 695.009 kb on - strand, within MPMX20_00676at 695.009 kb on - strand, within MPMX20_00676at 695.025 kb on - strand, within MPMX20_00676at 695.165 kb on + strandat 695.185 kb on - strandat 695.281 kb on - strandat 695.312 kb on + strand, within MPMX20_00677at 695.312 kb on + strand, within MPMX20_00677at 695.312 kb on + strand, within MPMX20_00677at 695.330 kb on - strand, within MPMX20_00677at 695.453 kb on - strand, within MPMX20_00677at 695.483 kb on - strand, within MPMX20_00677at 695.551 kb on - strand, within MPMX20_00677at 695.551 kb on - strand, within MPMX20_00677at 695.657 kb on + strand, within MPMX20_00677at 695.657 kb on + strand, within MPMX20_00677at 695.680 kb on - strand, within MPMX20_00677at 695.712 kb on + strand, within MPMX20_00677at 695.720 kb on - strand, within MPMX20_00677at 695.723 kb on + strand, within MPMX20_00677at 695.731 kb on - strand, within MPMX20_00677at 695.776 kb on - strand, within MPMX20_00677at 695.776 kb on - strand, within MPMX20_00677at 695.823 kb on - strand, within MPMX20_00677at 695.897 kb on + strand, within MPMX20_00677at 695.998 kb on - strandat 695.998 kb on - strandat 696.029 kb on - strandat 696.103 kb on + strand, within MPMX20_00678at 696.110 kb on + strand, within MPMX20_00678at 696.135 kb on + strand, within MPMX20_00678at 696.170 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.214 kb on + strand, within MPMX20_00678at 696.222 kb on - strand, within MPMX20_00678at 696.222 kb on - strand, within MPMX20_00678at 696.222 kb on - strand, within MPMX20_00678at 696.222 kb on - strand, within MPMX20_00678at 696.222 kb on - strand, within MPMX20_00678at 696.222 kb on - strand, within MPMX20_00678at 696.330 kb on + strand, within MPMX20_00678at 696.337 kb on - strand, within MPMX20_00678at 696.349 kb on + strand, within MPMX20_00678at 696.395 kb on + strand, within MPMX20_00678at 696.426 kb on - strand, within MPMX20_00678at 696.433 kb on - strand, within MPMX20_00678at 696.459 kb on + strand, within MPMX20_00678at 696.509 kb on + strand, within MPMX20_00678at 696.516 kb on + strand, within MPMX20_00678at 696.522 kb on - strand, within MPMX20_00678at 696.540 kb on + strand, within MPMX20_00678at 696.632 kb on - strand, within MPMX20_00678at 696.657 kb on - strand, within MPMX20_00678at 696.671 kb on - strand, within MPMX20_00678at 696.700 kb on + strand, within MPMX20_00678at 696.708 kb on - strand, within MPMX20_00678at 696.746 kb on - strand, within MPMX20_00678at 696.756 kb on + strand, within MPMX20_00678at 696.769 kb on + strand, within MPMX20_00678at 696.829 kb on - strandat 696.860 kb on + strandat 696.860 kb on - strandat 696.868 kb on - strandat 696.933 kb on - strandat 696.942 kb on - strandat 696.942 kb on - strandat 696.989 kb on + strandat 696.994 kb on - strandat 696.994 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uridine (C)
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694,233 - -0.5
694,259 + +0.1
694,259 + +0.1
694,267 - +1.2
694,270 - +0.8
694,376 + MPMX20_00676 0.19 -0.4
694,383 + MPMX20_00676 0.19 +0.6
694,383 + MPMX20_00676 0.19 +0.5
694,389 - MPMX20_00676 0.20 +0.2
694,391 - MPMX20_00676 0.20 -0.3
694,427 + MPMX20_00676 0.24 -1.2
694,499 - MPMX20_00676 0.30 -0.1
694,516 + MPMX20_00676 0.32 +0.2
694,541 + MPMX20_00676 0.34 -0.8
694,549 - MPMX20_00676 0.35 -1.6
694,605 - MPMX20_00676 0.40 -1.3
694,617 + MPMX20_00676 0.42 +0.1
694,701 + MPMX20_00676 0.50 -0.1
694,783 + MPMX20_00676 0.57 -1.3
694,791 - MPMX20_00676 0.58 -1.0
694,822 + MPMX20_00676 0.61 +0.8
694,825 - MPMX20_00676 0.61 -0.6
694,827 + MPMX20_00676 0.62 -1.2
694,835 - MPMX20_00676 0.62 +0.7
694,855 + MPMX20_00676 0.64 +0.2
694,860 + MPMX20_00676 0.65 -0.9
694,868 - MPMX20_00676 0.65 -0.3
694,868 - MPMX20_00676 0.65 -0.5
694,868 - MPMX20_00676 0.65 +0.9
694,883 + MPMX20_00676 0.67 -0.1
694,886 - MPMX20_00676 0.67 -0.3
694,952 - MPMX20_00676 0.73 -0.5
694,955 + MPMX20_00676 0.74 -1.1
694,996 + MPMX20_00676 0.78 +0.6
694,996 + MPMX20_00676 0.78 +0.1
695,001 + MPMX20_00676 0.78 +0.9
695,006 + MPMX20_00676 0.79 -0.9
695,009 - MPMX20_00676 0.79 -0.4
695,009 - MPMX20_00676 0.79 -0.4
695,025 - MPMX20_00676 0.80 -0.1
695,165 + +1.0
695,185 - +0.3
695,281 - +1.1
695,312 + MPMX20_00677 0.11 +0.9
695,312 + MPMX20_00677 0.11 +0.9
695,312 + MPMX20_00677 0.11 -0.7
695,330 - MPMX20_00677 0.13 -0.6
695,453 - MPMX20_00677 0.29 +2.6
695,483 - MPMX20_00677 0.33 -0.7
695,551 - MPMX20_00677 0.41 +3.5
695,551 - MPMX20_00677 0.41 -0.6
695,657 + MPMX20_00677 0.55 +0.1
695,657 + MPMX20_00677 0.55 +0.1
695,680 - MPMX20_00677 0.58 -1.0
695,712 + MPMX20_00677 0.62 +0.5
695,720 - MPMX20_00677 0.63 -0.7
695,723 + MPMX20_00677 0.63 -0.8
695,731 - MPMX20_00677 0.64 +1.4
695,776 - MPMX20_00677 0.70 +0.9
695,776 - MPMX20_00677 0.70 -0.6
695,823 - MPMX20_00677 0.76 +1.6
695,897 + MPMX20_00677 0.85 +0.1
695,998 - +0.7
695,998 - -0.8
696,029 - +0.3
696,103 + MPMX20_00678 0.11 +0.3
696,110 + MPMX20_00678 0.12 -0.7
696,135 + MPMX20_00678 0.15 -2.4
696,170 + MPMX20_00678 0.19 +0.2
696,214 + MPMX20_00678 0.24 +0.2
696,214 + MPMX20_00678 0.24 -2.6
696,214 + MPMX20_00678 0.24 -0.8
696,214 + MPMX20_00678 0.24 -0.8
696,214 + MPMX20_00678 0.24 +1.3
696,214 + MPMX20_00678 0.24 -1.0
696,214 + MPMX20_00678 0.24 -0.3
696,214 + MPMX20_00678 0.24 -0.4
696,222 - MPMX20_00678 0.25 -0.9
696,222 - MPMX20_00678 0.25 -1.3
696,222 - MPMX20_00678 0.25 -1.2
696,222 - MPMX20_00678 0.25 -0.8
696,222 - MPMX20_00678 0.25 +2.9
696,222 - MPMX20_00678 0.25 +0.2
696,330 + MPMX20_00678 0.38 -2.0
696,337 - MPMX20_00678 0.39 -0.4
696,349 + MPMX20_00678 0.40 -0.9
696,395 + MPMX20_00678 0.45 -1.6
696,426 - MPMX20_00678 0.49 +0.4
696,433 - MPMX20_00678 0.50 -0.3
696,459 + MPMX20_00678 0.53 -0.7
696,509 + MPMX20_00678 0.59 -0.5
696,516 + MPMX20_00678 0.59 -0.5
696,522 - MPMX20_00678 0.60 +0.3
696,540 + MPMX20_00678 0.62 -0.1
696,632 - MPMX20_00678 0.73 -0.9
696,657 - MPMX20_00678 0.76 -0.4
696,671 - MPMX20_00678 0.77 +0.9
696,700 + MPMX20_00678 0.81 -1.4
696,708 - MPMX20_00678 0.82 +0.5
696,746 - MPMX20_00678 0.86 +0.1
696,756 + MPMX20_00678 0.87 +0.5
696,769 + MPMX20_00678 0.89 -1.6
696,829 - -0.6
696,860 + +0.2
696,860 - +0.3
696,868 - -0.1
696,933 - +2.5
696,942 - +0.6
696,942 - -0.1
696,989 + +1.6
696,994 - +1.1
696,994 - +0.7

Or see this region's nucleotide sequence