Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04646

Experiment: Adenine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04645 and MPMX20_04646 are separated by 87 nucleotidesMPMX20_04646 and MPMX20_04647 are separated by 36 nucleotidesMPMX20_04647 and MPMX20_04648 are separated by 122 nucleotides MPMX20_04645: MPMX20_04645 - Adenine permease AdeP, at 4,865,287 to 4,866,627 _04645 MPMX20_04646: MPMX20_04646 - Quinone reductase, at 4,866,715 to 4,867,281 _04646 MPMX20_04647: MPMX20_04647 - hypothetical protein, at 4,867,318 to 4,868,064 _04647 MPMX20_04648: MPMX20_04648 - HTH-type transcriptional regulator YidZ, at 4,868,187 to 4,869,158 _04648 Position (kb) 4866 4867 4868Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4865.741 kb on + strand, within MPMX20_04645at 4865.749 kb on - strand, within MPMX20_04645at 4865.805 kb on - strand, within MPMX20_04645at 4865.833 kb on - strand, within MPMX20_04645at 4865.840 kb on + strand, within MPMX20_04645at 4865.913 kb on + strand, within MPMX20_04645at 4865.950 kb on - strand, within MPMX20_04645at 4865.959 kb on + strand, within MPMX20_04645at 4865.964 kb on + strand, within MPMX20_04645at 4865.969 kb on + strand, within MPMX20_04645at 4866.073 kb on - strand, within MPMX20_04645at 4866.246 kb on + strand, within MPMX20_04645at 4866.258 kb on + strand, within MPMX20_04645at 4866.380 kb on + strand, within MPMX20_04645at 4866.398 kb on + strand, within MPMX20_04645at 4866.398 kb on - strand, within MPMX20_04645at 4866.406 kb on - strand, within MPMX20_04645at 4866.406 kb on - strand, within MPMX20_04645at 4866.472 kb on + strand, within MPMX20_04645at 4866.472 kb on + strand, within MPMX20_04645at 4866.505 kb on - strandat 4866.516 kb on - strandat 4866.534 kb on + strandat 4866.534 kb on + strandat 4866.542 kb on - strandat 4866.671 kb on + strandat 4866.681 kb on - strandat 4866.681 kb on - strandat 4866.688 kb on + strandat 4866.719 kb on + strandat 4866.719 kb on - strandat 4866.720 kb on - strandat 4866.776 kb on + strand, within MPMX20_04646at 4866.815 kb on + strand, within MPMX20_04646at 4866.823 kb on - strand, within MPMX20_04646at 4866.823 kb on - strand, within MPMX20_04646at 4866.878 kb on + strand, within MPMX20_04646at 4866.946 kb on - strand, within MPMX20_04646at 4867.001 kb on + strand, within MPMX20_04646at 4867.011 kb on - strand, within MPMX20_04646at 4867.089 kb on + strand, within MPMX20_04646at 4867.089 kb on + strand, within MPMX20_04646at 4867.089 kb on + strand, within MPMX20_04646at 4867.089 kb on + strand, within MPMX20_04646at 4867.091 kb on + strand, within MPMX20_04646at 4867.097 kb on - strand, within MPMX20_04646at 4867.097 kb on - strand, within MPMX20_04646at 4867.097 kb on - strand, within MPMX20_04646at 4867.109 kb on + strand, within MPMX20_04646at 4867.133 kb on - strand, within MPMX20_04646at 4867.174 kb on - strand, within MPMX20_04646at 4867.193 kb on + strand, within MPMX20_04646at 4867.252 kb on - strandat 4867.301 kb on + strandat 4867.311 kb on + strandat 4867.334 kb on - strandat 4867.422 kb on - strand, within MPMX20_04647at 4867.481 kb on + strand, within MPMX20_04647at 4867.489 kb on - strand, within MPMX20_04647at 4867.514 kb on + strand, within MPMX20_04647at 4867.597 kb on + strand, within MPMX20_04647at 4867.635 kb on + strand, within MPMX20_04647at 4867.640 kb on + strand, within MPMX20_04647at 4867.648 kb on - strand, within MPMX20_04647at 4867.771 kb on + strand, within MPMX20_04647at 4867.781 kb on + strand, within MPMX20_04647at 4867.869 kb on - strand, within MPMX20_04647at 4867.869 kb on - strand, within MPMX20_04647at 4867.906 kb on - strand, within MPMX20_04647at 4868.155 kb on + strandat 4868.278 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine (C)
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4,865,741 + MPMX20_04645 0.34 +0.3
4,865,749 - MPMX20_04645 0.34 +0.2
4,865,805 - MPMX20_04645 0.39 +0.6
4,865,833 - MPMX20_04645 0.41 -2.5
4,865,840 + MPMX20_04645 0.41 -2.6
4,865,913 + MPMX20_04645 0.47 -3.2
4,865,950 - MPMX20_04645 0.49 -3.7
4,865,959 + MPMX20_04645 0.50 -1.0
4,865,964 + MPMX20_04645 0.50 +1.8
4,865,969 + MPMX20_04645 0.51 -3.3
4,866,073 - MPMX20_04645 0.59 +2.3
4,866,246 + MPMX20_04645 0.72 -0.5
4,866,258 + MPMX20_04645 0.72 +0.9
4,866,380 + MPMX20_04645 0.82 -2.1
4,866,398 + MPMX20_04645 0.83 +0.8
4,866,398 - MPMX20_04645 0.83 +1.5
4,866,406 - MPMX20_04645 0.83 -3.1
4,866,406 - MPMX20_04645 0.83 -0.6
4,866,472 + MPMX20_04645 0.88 -0.1
4,866,472 + MPMX20_04645 0.88 -2.3
4,866,505 - +0.7
4,866,516 - +1.2
4,866,534 + -3.8
4,866,534 + -0.6
4,866,542 - -2.3
4,866,671 + -2.3
4,866,681 - -0.0
4,866,681 - +1.8
4,866,688 + -0.8
4,866,719 + +3.3
4,866,719 - -0.3
4,866,720 - +1.4
4,866,776 + MPMX20_04646 0.11 -0.5
4,866,815 + MPMX20_04646 0.18 -2.2
4,866,823 - MPMX20_04646 0.19 -0.3
4,866,823 - MPMX20_04646 0.19 -3.4
4,866,878 + MPMX20_04646 0.29 -1.0
4,866,946 - MPMX20_04646 0.41 -0.9
4,867,001 + MPMX20_04646 0.50 +0.4
4,867,011 - MPMX20_04646 0.52 -0.6
4,867,089 + MPMX20_04646 0.66 -3.1
4,867,089 + MPMX20_04646 0.66 +0.0
4,867,089 + MPMX20_04646 0.66 -0.9
4,867,089 + MPMX20_04646 0.66 +1.6
4,867,091 + MPMX20_04646 0.66 -1.6
4,867,097 - MPMX20_04646 0.67 -1.7
4,867,097 - MPMX20_04646 0.67 -2.0
4,867,097 - MPMX20_04646 0.67 -1.2
4,867,109 + MPMX20_04646 0.69 +0.8
4,867,133 - MPMX20_04646 0.74 -0.5
4,867,174 - MPMX20_04646 0.81 -1.9
4,867,193 + MPMX20_04646 0.84 +0.8
4,867,252 - +1.5
4,867,301 + +0.6
4,867,311 + -3.6
4,867,334 - -1.8
4,867,422 - MPMX20_04647 0.14 +0.5
4,867,481 + MPMX20_04647 0.22 +1.1
4,867,489 - MPMX20_04647 0.23 +1.0
4,867,514 + MPMX20_04647 0.26 -3.9
4,867,597 + MPMX20_04647 0.37 +0.4
4,867,635 + MPMX20_04647 0.42 -0.6
4,867,640 + MPMX20_04647 0.43 +0.1
4,867,648 - MPMX20_04647 0.44 -1.0
4,867,771 + MPMX20_04647 0.61 +0.4
4,867,781 + MPMX20_04647 0.62 -2.9
4,867,869 - MPMX20_04647 0.74 -1.6
4,867,869 - MPMX20_04647 0.74 -1.6
4,867,906 - MPMX20_04647 0.79 +2.1
4,868,155 + -0.3
4,868,278 - +0.1

Or see this region's nucleotide sequence