Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02754 and MPMX20_02755 are separated by 40 nucleotides MPMX20_02755 and MPMX20_02756 are separated by 39 nucleotides MPMX20_02756 and MPMX20_02757 are separated by 234 nucleotides
MPMX20_02754: MPMX20_02754 - Formate-dependent phosphoribosylglycinamide formyltransferase, at 2,908,390 to 2,909,568
_02754
MPMX20_02755: MPMX20_02755 - KHG/KDPG aldolase, at 2,909,609 to 2,910,250
_02755
MPMX20_02756: MPMX20_02756 - Phosphogluconate dehydratase, at 2,910,290 to 2,912,101
_02756
MPMX20_02757: MPMX20_02757 - Glucose-6-phosphate 1-dehydrogenase, at 2,912,336 to 2,913,811
_02757
Position (kb)
2910
2911
2912
2913 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2909.298 kb on - strand, within MPMX20_02754 at 2909.299 kb on - strand, within MPMX20_02754 at 2909.396 kb on + strand, within MPMX20_02754 at 2909.396 kb on - strand, within MPMX20_02754 at 2909.414 kb on + strand, within MPMX20_02754 at 2909.415 kb on + strand, within MPMX20_02754 at 2909.423 kb on - strand, within MPMX20_02754 at 2909.429 kb on - strand, within MPMX20_02754 at 2909.485 kb on - strand at 2909.785 kb on - strand, within MPMX20_02755 at 2909.815 kb on - strand, within MPMX20_02755 at 2909.965 kb on + strand, within MPMX20_02755 at 2909.965 kb on + strand, within MPMX20_02755 at 2909.965 kb on + strand, within MPMX20_02755 at 2909.965 kb on + strand, within MPMX20_02755 at 2909.965 kb on + strand, within MPMX20_02755 at 2909.968 kb on - strand, within MPMX20_02755 at 2909.973 kb on - strand, within MPMX20_02755 at 2909.973 kb on - strand, within MPMX20_02755 at 2909.973 kb on - strand, within MPMX20_02755 at 2909.973 kb on - strand, within MPMX20_02755 at 2910.117 kb on - strand, within MPMX20_02755 at 2910.207 kb on - strand at 2910.215 kb on - strand at 2910.295 kb on + strand at 2910.305 kb on + strand at 2910.388 kb on + strand at 2910.388 kb on + strand at 2910.388 kb on + strand at 2910.393 kb on + strand at 2910.413 kb on + strand at 2910.448 kb on - strand at 2910.561 kb on + strand, within MPMX20_02756 at 2910.818 kb on + strand, within MPMX20_02756 at 2910.826 kb on - strand, within MPMX20_02756 at 2910.826 kb on - strand, within MPMX20_02756 at 2910.826 kb on - strand, within MPMX20_02756 at 2910.831 kb on - strand, within MPMX20_02756 at 2910.835 kb on + strand, within MPMX20_02756 at 2910.836 kb on - strand, within MPMX20_02756 at 2910.879 kb on + strand, within MPMX20_02756 at 2910.886 kb on + strand, within MPMX20_02756 at 2910.887 kb on - strand, within MPMX20_02756 at 2910.894 kb on - strand, within MPMX20_02756 at 2910.920 kb on - strand, within MPMX20_02756 at 2910.920 kb on - strand, within MPMX20_02756 at 2910.927 kb on + strand, within MPMX20_02756 at 2910.949 kb on + strand, within MPMX20_02756 at 2910.949 kb on + strand, within MPMX20_02756 at 2910.949 kb on + strand, within MPMX20_02756 at 2910.956 kb on + strand, within MPMX20_02756 at 2910.957 kb on + strand, within MPMX20_02756 at 2910.957 kb on + strand, within MPMX20_02756 at 2910.957 kb on - strand, within MPMX20_02756 at 2910.957 kb on - strand, within MPMX20_02756 at 2910.965 kb on - strand, within MPMX20_02756 at 2910.989 kb on + strand, within MPMX20_02756 at 2911.056 kb on + strand, within MPMX20_02756 at 2911.064 kb on - strand, within MPMX20_02756 at 2911.335 kb on + strand, within MPMX20_02756 at 2911.362 kb on + strand, within MPMX20_02756 at 2911.416 kb on + strand, within MPMX20_02756 at 2911.419 kb on - strand, within MPMX20_02756 at 2911.423 kb on - strand, within MPMX20_02756 at 2911.497 kb on + strand, within MPMX20_02756 at 2911.497 kb on + strand, within MPMX20_02756 at 2911.505 kb on - strand, within MPMX20_02756 at 2911.505 kb on - strand, within MPMX20_02756 at 2911.505 kb on - strand, within MPMX20_02756 at 2911.611 kb on + strand, within MPMX20_02756 at 2911.611 kb on + strand, within MPMX20_02756 at 2911.622 kb on + strand, within MPMX20_02756 at 2911.676 kb on - strand, within MPMX20_02756 at 2911.684 kb on + strand, within MPMX20_02756 at 2911.718 kb on + strand, within MPMX20_02756 at 2911.723 kb on + strand, within MPMX20_02756 at 2911.726 kb on - strand, within MPMX20_02756 at 2911.726 kb on - strand, within MPMX20_02756 at 2911.732 kb on + strand, within MPMX20_02756 at 2911.737 kb on + strand, within MPMX20_02756 at 2911.745 kb on - strand, within MPMX20_02756 at 2911.812 kb on - strand, within MPMX20_02756 at 2911.976 kb on - strand at 2911.979 kb on + strand at 2912.009 kb on - strand at 2912.017 kb on + strand at 2912.053 kb on - strand at 2912.053 kb on - strand at 2912.053 kb on - strand at 2912.355 kb on - strand at 2912.355 kb on - strand at 2912.355 kb on - strand at 2912.357 kb on - strand at 2912.357 kb on - strand at 2912.357 kb on - strand at 2912.377 kb on - strand at 2912.395 kb on + strand at 2912.395 kb on + strand at 2912.403 kb on - strand at 2912.403 kb on - strand at 2912.403 kb on - strand at 2912.442 kb on + strand at 2912.562 kb on - strand, within MPMX20_02757 at 2912.602 kb on + strand, within MPMX20_02757 at 2912.770 kb on + strand, within MPMX20_02757 at 2912.922 kb on + strand, within MPMX20_02757 at 2912.951 kb on - strand, within MPMX20_02757
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 2,909,298 - MPMX20_02754 0.77 +0.3 2,909,299 - MPMX20_02754 0.77 +1.9 2,909,396 + MPMX20_02754 0.85 -1.2 2,909,396 - MPMX20_02754 0.85 -0.1 2,909,414 + MPMX20_02754 0.87 -1.2 2,909,415 + MPMX20_02754 0.87 +0.9 2,909,423 - MPMX20_02754 0.88 +1.1 2,909,429 - MPMX20_02754 0.88 -2.7 2,909,485 - -0.8 2,909,785 - MPMX20_02755 0.27 +0.5 2,909,815 - MPMX20_02755 0.32 -0.9 2,909,965 + MPMX20_02755 0.55 -2.4 2,909,965 + MPMX20_02755 0.55 -0.3 2,909,965 + MPMX20_02755 0.55 +0.8 2,909,965 + MPMX20_02755 0.55 -2.8 2,909,965 + MPMX20_02755 0.55 -2.5 2,909,968 - MPMX20_02755 0.56 +2.0 2,909,973 - MPMX20_02755 0.57 -0.0 2,909,973 - MPMX20_02755 0.57 -2.9 2,909,973 - MPMX20_02755 0.57 -2.2 2,909,973 - MPMX20_02755 0.57 -3.6 2,910,117 - MPMX20_02755 0.79 -1.8 2,910,207 - -1.8 2,910,215 - -0.2 2,910,295 + +0.7 2,910,305 + -2.0 2,910,388 + +0.8 2,910,388 + -1.8 2,910,388 + -0.2 2,910,393 + +0.4 2,910,413 + +0.4 2,910,448 - -3.7 2,910,561 + MPMX20_02756 0.15 +2.7 2,910,818 + MPMX20_02756 0.29 -1.6 2,910,826 - MPMX20_02756 0.30 -0.2 2,910,826 - MPMX20_02756 0.30 -3.3 2,910,826 - MPMX20_02756 0.30 -0.1 2,910,831 - MPMX20_02756 0.30 +1.1 2,910,835 + MPMX20_02756 0.30 +0.3 2,910,836 - MPMX20_02756 0.30 -1.0 2,910,879 + MPMX20_02756 0.33 +2.1 2,910,886 + MPMX20_02756 0.33 +0.7 2,910,887 - MPMX20_02756 0.33 +0.4 2,910,894 - MPMX20_02756 0.33 +0.2 2,910,920 - MPMX20_02756 0.35 +0.5 2,910,920 - MPMX20_02756 0.35 -2.4 2,910,927 + MPMX20_02756 0.35 +0.8 2,910,949 + MPMX20_02756 0.36 -0.7 2,910,949 + MPMX20_02756 0.36 +0.5 2,910,949 + MPMX20_02756 0.36 -0.9 2,910,956 + MPMX20_02756 0.37 -1.2 2,910,957 + MPMX20_02756 0.37 +0.6 2,910,957 + MPMX20_02756 0.37 +0.3 2,910,957 - MPMX20_02756 0.37 +0.6 2,910,957 - MPMX20_02756 0.37 -3.0 2,910,965 - MPMX20_02756 0.37 -3.2 2,910,989 + MPMX20_02756 0.39 +1.0 2,911,056 + MPMX20_02756 0.42 -0.5 2,911,064 - MPMX20_02756 0.43 +2.4 2,911,335 + MPMX20_02756 0.58 -1.9 2,911,362 + MPMX20_02756 0.59 +3.7 2,911,416 + MPMX20_02756 0.62 -0.2 2,911,419 - MPMX20_02756 0.62 +1.6 2,911,423 - MPMX20_02756 0.63 -0.8 2,911,497 + MPMX20_02756 0.67 +3.0 2,911,497 + MPMX20_02756 0.67 -2.2 2,911,505 - MPMX20_02756 0.67 +0.6 2,911,505 - MPMX20_02756 0.67 -1.3 2,911,505 - MPMX20_02756 0.67 -1.9 2,911,611 + MPMX20_02756 0.73 +0.5 2,911,611 + MPMX20_02756 0.73 -3.2 2,911,622 + MPMX20_02756 0.74 +1.1 2,911,676 - MPMX20_02756 0.76 +1.7 2,911,684 + MPMX20_02756 0.77 +2.1 2,911,718 + MPMX20_02756 0.79 -0.9 2,911,723 + MPMX20_02756 0.79 -2.8 2,911,726 - MPMX20_02756 0.79 -0.4 2,911,726 - MPMX20_02756 0.79 -1.6 2,911,732 + MPMX20_02756 0.80 +0.3 2,911,737 + MPMX20_02756 0.80 +1.0 2,911,745 - MPMX20_02756 0.80 +0.4 2,911,812 - MPMX20_02756 0.84 -1.8 2,911,976 - +1.1 2,911,979 + -1.8 2,912,009 - -0.1 2,912,017 + -0.8 2,912,053 - +0.7 2,912,053 - +0.2 2,912,053 - -3.4 2,912,355 - +1.3 2,912,355 - +0.4 2,912,355 - -2.0 2,912,357 - -1.7 2,912,357 - +0.4 2,912,357 - -3.1 2,912,377 - -0.8 2,912,395 + -0.6 2,912,395 + -3.3 2,912,403 - +0.7 2,912,403 - +0.4 2,912,403 - +0.8 2,912,442 + +1.3 2,912,562 - MPMX20_02757 0.15 +1.7 2,912,602 + MPMX20_02757 0.18 -2.7 2,912,770 + MPMX20_02757 0.29 -0.9 2,912,922 + MPMX20_02757 0.40 -1.2 2,912,951 - MPMX20_02757 0.42 -0.0
Or see this region's nucleotide sequence