Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02756

Experiment: Adenine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02754 and MPMX20_02755 are separated by 40 nucleotidesMPMX20_02755 and MPMX20_02756 are separated by 39 nucleotidesMPMX20_02756 and MPMX20_02757 are separated by 234 nucleotides MPMX20_02754: MPMX20_02754 - Formate-dependent phosphoribosylglycinamide formyltransferase, at 2,908,390 to 2,909,568 _02754 MPMX20_02755: MPMX20_02755 - KHG/KDPG aldolase, at 2,909,609 to 2,910,250 _02755 MPMX20_02756: MPMX20_02756 - Phosphogluconate dehydratase, at 2,910,290 to 2,912,101 _02756 MPMX20_02757: MPMX20_02757 - Glucose-6-phosphate 1-dehydrogenase, at 2,912,336 to 2,913,811 _02757 Position (kb) 2910 2911 2912 2913Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2909.298 kb on - strand, within MPMX20_02754at 2909.299 kb on - strand, within MPMX20_02754at 2909.396 kb on + strand, within MPMX20_02754at 2909.396 kb on - strand, within MPMX20_02754at 2909.414 kb on + strand, within MPMX20_02754at 2909.415 kb on + strand, within MPMX20_02754at 2909.423 kb on - strand, within MPMX20_02754at 2909.429 kb on - strand, within MPMX20_02754at 2909.485 kb on - strandat 2909.785 kb on - strand, within MPMX20_02755at 2909.815 kb on - strand, within MPMX20_02755at 2909.965 kb on + strand, within MPMX20_02755at 2909.965 kb on + strand, within MPMX20_02755at 2909.965 kb on + strand, within MPMX20_02755at 2909.965 kb on + strand, within MPMX20_02755at 2909.965 kb on + strand, within MPMX20_02755at 2909.968 kb on - strand, within MPMX20_02755at 2909.973 kb on - strand, within MPMX20_02755at 2909.973 kb on - strand, within MPMX20_02755at 2909.973 kb on - strand, within MPMX20_02755at 2909.973 kb on - strand, within MPMX20_02755at 2910.117 kb on - strand, within MPMX20_02755at 2910.207 kb on - strandat 2910.215 kb on - strandat 2910.295 kb on + strandat 2910.305 kb on + strandat 2910.388 kb on + strandat 2910.388 kb on + strandat 2910.388 kb on + strandat 2910.393 kb on + strandat 2910.413 kb on + strandat 2910.448 kb on - strandat 2910.561 kb on + strand, within MPMX20_02756at 2910.818 kb on + strand, within MPMX20_02756at 2910.826 kb on - strand, within MPMX20_02756at 2910.826 kb on - strand, within MPMX20_02756at 2910.826 kb on - strand, within MPMX20_02756at 2910.831 kb on - strand, within MPMX20_02756at 2910.835 kb on + strand, within MPMX20_02756at 2910.836 kb on - strand, within MPMX20_02756at 2910.879 kb on + strand, within MPMX20_02756at 2910.886 kb on + strand, within MPMX20_02756at 2910.887 kb on - strand, within MPMX20_02756at 2910.894 kb on - strand, within MPMX20_02756at 2910.920 kb on - strand, within MPMX20_02756at 2910.920 kb on - strand, within MPMX20_02756at 2910.927 kb on + strand, within MPMX20_02756at 2910.949 kb on + strand, within MPMX20_02756at 2910.949 kb on + strand, within MPMX20_02756at 2910.949 kb on + strand, within MPMX20_02756at 2910.956 kb on + strand, within MPMX20_02756at 2910.957 kb on + strand, within MPMX20_02756at 2910.957 kb on + strand, within MPMX20_02756at 2910.957 kb on - strand, within MPMX20_02756at 2910.957 kb on - strand, within MPMX20_02756at 2910.965 kb on - strand, within MPMX20_02756at 2910.989 kb on + strand, within MPMX20_02756at 2911.056 kb on + strand, within MPMX20_02756at 2911.064 kb on - strand, within MPMX20_02756at 2911.335 kb on + strand, within MPMX20_02756at 2911.362 kb on + strand, within MPMX20_02756at 2911.416 kb on + strand, within MPMX20_02756at 2911.419 kb on - strand, within MPMX20_02756at 2911.423 kb on - strand, within MPMX20_02756at 2911.497 kb on + strand, within MPMX20_02756at 2911.497 kb on + strand, within MPMX20_02756at 2911.505 kb on - strand, within MPMX20_02756at 2911.505 kb on - strand, within MPMX20_02756at 2911.505 kb on - strand, within MPMX20_02756at 2911.611 kb on + strand, within MPMX20_02756at 2911.611 kb on + strand, within MPMX20_02756at 2911.622 kb on + strand, within MPMX20_02756at 2911.676 kb on - strand, within MPMX20_02756at 2911.684 kb on + strand, within MPMX20_02756at 2911.718 kb on + strand, within MPMX20_02756at 2911.723 kb on + strand, within MPMX20_02756at 2911.726 kb on - strand, within MPMX20_02756at 2911.726 kb on - strand, within MPMX20_02756at 2911.732 kb on + strand, within MPMX20_02756at 2911.737 kb on + strand, within MPMX20_02756at 2911.745 kb on - strand, within MPMX20_02756at 2911.812 kb on - strand, within MPMX20_02756at 2911.976 kb on - strandat 2911.979 kb on + strandat 2912.009 kb on - strandat 2912.017 kb on + strandat 2912.053 kb on - strandat 2912.053 kb on - strandat 2912.053 kb on - strandat 2912.355 kb on - strandat 2912.355 kb on - strandat 2912.355 kb on - strandat 2912.357 kb on - strandat 2912.357 kb on - strandat 2912.357 kb on - strandat 2912.377 kb on - strandat 2912.395 kb on + strandat 2912.395 kb on + strandat 2912.403 kb on - strandat 2912.403 kb on - strandat 2912.403 kb on - strandat 2912.442 kb on + strandat 2912.562 kb on - strand, within MPMX20_02757at 2912.602 kb on + strand, within MPMX20_02757at 2912.770 kb on + strand, within MPMX20_02757at 2912.922 kb on + strand, within MPMX20_02757at 2912.951 kb on - strand, within MPMX20_02757

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine (C)
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2,909,298 - MPMX20_02754 0.77 +0.3
2,909,299 - MPMX20_02754 0.77 +1.9
2,909,396 + MPMX20_02754 0.85 -1.2
2,909,396 - MPMX20_02754 0.85 -0.1
2,909,414 + MPMX20_02754 0.87 -1.2
2,909,415 + MPMX20_02754 0.87 +0.9
2,909,423 - MPMX20_02754 0.88 +1.1
2,909,429 - MPMX20_02754 0.88 -2.7
2,909,485 - -0.8
2,909,785 - MPMX20_02755 0.27 +0.5
2,909,815 - MPMX20_02755 0.32 -0.9
2,909,965 + MPMX20_02755 0.55 -2.4
2,909,965 + MPMX20_02755 0.55 -0.3
2,909,965 + MPMX20_02755 0.55 +0.8
2,909,965 + MPMX20_02755 0.55 -2.8
2,909,965 + MPMX20_02755 0.55 -2.5
2,909,968 - MPMX20_02755 0.56 +2.0
2,909,973 - MPMX20_02755 0.57 -0.0
2,909,973 - MPMX20_02755 0.57 -2.9
2,909,973 - MPMX20_02755 0.57 -2.2
2,909,973 - MPMX20_02755 0.57 -3.6
2,910,117 - MPMX20_02755 0.79 -1.8
2,910,207 - -1.8
2,910,215 - -0.2
2,910,295 + +0.7
2,910,305 + -2.0
2,910,388 + +0.8
2,910,388 + -1.8
2,910,388 + -0.2
2,910,393 + +0.4
2,910,413 + +0.4
2,910,448 - -3.7
2,910,561 + MPMX20_02756 0.15 +2.7
2,910,818 + MPMX20_02756 0.29 -1.6
2,910,826 - MPMX20_02756 0.30 -0.2
2,910,826 - MPMX20_02756 0.30 -3.3
2,910,826 - MPMX20_02756 0.30 -0.1
2,910,831 - MPMX20_02756 0.30 +1.1
2,910,835 + MPMX20_02756 0.30 +0.3
2,910,836 - MPMX20_02756 0.30 -1.0
2,910,879 + MPMX20_02756 0.33 +2.1
2,910,886 + MPMX20_02756 0.33 +0.7
2,910,887 - MPMX20_02756 0.33 +0.4
2,910,894 - MPMX20_02756 0.33 +0.2
2,910,920 - MPMX20_02756 0.35 +0.5
2,910,920 - MPMX20_02756 0.35 -2.4
2,910,927 + MPMX20_02756 0.35 +0.8
2,910,949 + MPMX20_02756 0.36 -0.7
2,910,949 + MPMX20_02756 0.36 +0.5
2,910,949 + MPMX20_02756 0.36 -0.9
2,910,956 + MPMX20_02756 0.37 -1.2
2,910,957 + MPMX20_02756 0.37 +0.6
2,910,957 + MPMX20_02756 0.37 +0.3
2,910,957 - MPMX20_02756 0.37 +0.6
2,910,957 - MPMX20_02756 0.37 -3.0
2,910,965 - MPMX20_02756 0.37 -3.2
2,910,989 + MPMX20_02756 0.39 +1.0
2,911,056 + MPMX20_02756 0.42 -0.5
2,911,064 - MPMX20_02756 0.43 +2.4
2,911,335 + MPMX20_02756 0.58 -1.9
2,911,362 + MPMX20_02756 0.59 +3.7
2,911,416 + MPMX20_02756 0.62 -0.2
2,911,419 - MPMX20_02756 0.62 +1.6
2,911,423 - MPMX20_02756 0.63 -0.8
2,911,497 + MPMX20_02756 0.67 +3.0
2,911,497 + MPMX20_02756 0.67 -2.2
2,911,505 - MPMX20_02756 0.67 +0.6
2,911,505 - MPMX20_02756 0.67 -1.3
2,911,505 - MPMX20_02756 0.67 -1.9
2,911,611 + MPMX20_02756 0.73 +0.5
2,911,611 + MPMX20_02756 0.73 -3.2
2,911,622 + MPMX20_02756 0.74 +1.1
2,911,676 - MPMX20_02756 0.76 +1.7
2,911,684 + MPMX20_02756 0.77 +2.1
2,911,718 + MPMX20_02756 0.79 -0.9
2,911,723 + MPMX20_02756 0.79 -2.8
2,911,726 - MPMX20_02756 0.79 -0.4
2,911,726 - MPMX20_02756 0.79 -1.6
2,911,732 + MPMX20_02756 0.80 +0.3
2,911,737 + MPMX20_02756 0.80 +1.0
2,911,745 - MPMX20_02756 0.80 +0.4
2,911,812 - MPMX20_02756 0.84 -1.8
2,911,976 - +1.1
2,911,979 + -1.8
2,912,009 - -0.1
2,912,017 + -0.8
2,912,053 - +0.7
2,912,053 - +0.2
2,912,053 - -3.4
2,912,355 - +1.3
2,912,355 - +0.4
2,912,355 - -2.0
2,912,357 - -1.7
2,912,357 - +0.4
2,912,357 - -3.1
2,912,377 - -0.8
2,912,395 + -0.6
2,912,395 + -3.3
2,912,403 - +0.7
2,912,403 - +0.4
2,912,403 - +0.8
2,912,442 + +1.3
2,912,562 - MPMX20_02757 0.15 +1.7
2,912,602 + MPMX20_02757 0.18 -2.7
2,912,770 + MPMX20_02757 0.29 -0.9
2,912,922 + MPMX20_02757 0.40 -1.2
2,912,951 - MPMX20_02757 0.42 -0.0

Or see this region's nucleotide sequence