Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02076

Experiment: Adenine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02074 and MPMX20_02075 are separated by 17 nucleotidesMPMX20_02075 and MPMX20_02076 overlap by 4 nucleotidesMPMX20_02076 and MPMX20_02077 are separated by 4 nucleotidesMPMX20_02077 and MPMX20_02078 are separated by 11 nucleotides MPMX20_02074: MPMX20_02074 - hypothetical protein, at 2,166,913 to 2,167,971 _02074 MPMX20_02075: MPMX20_02075 - hypothetical protein, at 2,167,989 to 2,168,804 _02075 MPMX20_02076: MPMX20_02076 - Bicarbonate transport ATP-binding protein CmpD, at 2,168,801 to 2,169,577 _02076 MPMX20_02077: MPMX20_02077 - hypothetical protein, at 2,169,582 to 2,170,298 _02077 MPMX20_02078: MPMX20_02078 - hypothetical protein, at 2,170,310 to 2,170,942 _02078 Position (kb) 2168 2169 2170Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2167.803 kb on + strand, within MPMX20_02074at 2167.870 kb on + strandat 2167.897 kb on - strandat 2167.902 kb on - strandat 2167.903 kb on + strandat 2167.908 kb on - strandat 2167.992 kb on - strandat 2168.054 kb on - strandat 2168.092 kb on + strand, within MPMX20_02075at 2168.092 kb on + strand, within MPMX20_02075at 2168.165 kb on - strand, within MPMX20_02075at 2168.183 kb on - strand, within MPMX20_02075at 2168.193 kb on - strand, within MPMX20_02075at 2168.198 kb on + strand, within MPMX20_02075at 2168.206 kb on - strand, within MPMX20_02075at 2168.211 kb on - strand, within MPMX20_02075at 2168.221 kb on + strand, within MPMX20_02075at 2168.224 kb on - strand, within MPMX20_02075at 2168.228 kb on - strand, within MPMX20_02075at 2168.253 kb on + strand, within MPMX20_02075at 2168.266 kb on + strand, within MPMX20_02075at 2168.402 kb on + strand, within MPMX20_02075at 2168.410 kb on - strand, within MPMX20_02075at 2168.452 kb on + strand, within MPMX20_02075at 2168.460 kb on - strand, within MPMX20_02075at 2168.521 kb on + strand, within MPMX20_02075at 2168.526 kb on + strand, within MPMX20_02075at 2168.537 kb on - strand, within MPMX20_02075at 2168.563 kb on - strand, within MPMX20_02075at 2168.647 kb on + strand, within MPMX20_02075at 2168.654 kb on - strand, within MPMX20_02075at 2168.691 kb on + strand, within MPMX20_02075at 2168.716 kb on + strand, within MPMX20_02075at 2168.849 kb on - strandat 2168.852 kb on + strandat 2168.852 kb on + strandat 2168.870 kb on - strandat 2168.875 kb on + strandat 2168.903 kb on - strand, within MPMX20_02076at 2168.996 kb on - strand, within MPMX20_02076at 2169.008 kb on + strand, within MPMX20_02076at 2169.213 kb on - strand, within MPMX20_02076at 2169.242 kb on + strand, within MPMX20_02076at 2169.250 kb on - strand, within MPMX20_02076at 2169.259 kb on + strand, within MPMX20_02076at 2169.272 kb on - strand, within MPMX20_02076at 2169.308 kb on + strand, within MPMX20_02076at 2169.309 kb on + strand, within MPMX20_02076at 2169.309 kb on + strand, within MPMX20_02076at 2169.313 kb on + strand, within MPMX20_02076at 2169.340 kb on - strand, within MPMX20_02076at 2169.363 kb on - strand, within MPMX20_02076at 2169.411 kb on + strand, within MPMX20_02076at 2169.411 kb on + strand, within MPMX20_02076at 2169.418 kb on - strand, within MPMX20_02076at 2169.419 kb on - strand, within MPMX20_02076at 2169.477 kb on - strand, within MPMX20_02076at 2169.485 kb on - strand, within MPMX20_02076at 2169.530 kb on + strandat 2169.543 kb on - strandat 2169.543 kb on - strandat 2169.543 kb on - strandat 2169.572 kb on + strandat 2169.577 kb on + strandat 2169.620 kb on - strandat 2169.632 kb on + strandat 2169.632 kb on + strandat 2169.655 kb on + strand, within MPMX20_02077at 2169.665 kb on + strand, within MPMX20_02077at 2169.685 kb on - strand, within MPMX20_02077at 2169.730 kb on - strand, within MPMX20_02077at 2169.746 kb on + strand, within MPMX20_02077at 2169.770 kb on - strand, within MPMX20_02077at 2169.770 kb on - strand, within MPMX20_02077at 2169.919 kb on + strand, within MPMX20_02077at 2169.919 kb on + strand, within MPMX20_02077at 2169.919 kb on + strand, within MPMX20_02077at 2169.919 kb on + strand, within MPMX20_02077at 2169.927 kb on - strand, within MPMX20_02077at 2169.927 kb on - strand, within MPMX20_02077at 2169.977 kb on + strand, within MPMX20_02077at 2170.064 kb on - strand, within MPMX20_02077at 2170.086 kb on - strand, within MPMX20_02077at 2170.104 kb on - strand, within MPMX20_02077at 2170.131 kb on - strand, within MPMX20_02077at 2170.131 kb on - strand, within MPMX20_02077at 2170.131 kb on - strand, within MPMX20_02077at 2170.156 kb on - strand, within MPMX20_02077at 2170.165 kb on + strand, within MPMX20_02077at 2170.300 kb on - strandat 2170.360 kb on + strandat 2170.370 kb on + strandat 2170.379 kb on - strand, within MPMX20_02078at 2170.384 kb on + strand, within MPMX20_02078at 2170.453 kb on + strand, within MPMX20_02078at 2170.453 kb on + strand, within MPMX20_02078at 2170.461 kb on - strand, within MPMX20_02078at 2170.493 kb on - strand, within MPMX20_02078at 2170.527 kb on - strand, within MPMX20_02078at 2170.541 kb on + strand, within MPMX20_02078at 2170.542 kb on - strand, within MPMX20_02078at 2170.558 kb on + strand, within MPMX20_02078

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine (C)
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2,167,803 + MPMX20_02074 0.84 -0.0
2,167,870 + -0.0
2,167,897 - -3.3
2,167,902 - +0.0
2,167,903 + -1.7
2,167,908 - +0.3
2,167,992 - -0.0
2,168,054 - -2.6
2,168,092 + MPMX20_02075 0.13 +1.3
2,168,092 + MPMX20_02075 0.13 +0.7
2,168,165 - MPMX20_02075 0.22 +2.3
2,168,183 - MPMX20_02075 0.24 +1.2
2,168,193 - MPMX20_02075 0.25 +0.0
2,168,198 + MPMX20_02075 0.26 +0.7
2,168,206 - MPMX20_02075 0.27 +2.3
2,168,211 - MPMX20_02075 0.27 +0.6
2,168,221 + MPMX20_02075 0.28 +1.1
2,168,224 - MPMX20_02075 0.29 -2.9
2,168,228 - MPMX20_02075 0.29 +0.7
2,168,253 + MPMX20_02075 0.32 +1.3
2,168,266 + MPMX20_02075 0.34 +1.8
2,168,402 + MPMX20_02075 0.51 +2.0
2,168,410 - MPMX20_02075 0.52 +1.8
2,168,452 + MPMX20_02075 0.57 -0.4
2,168,460 - MPMX20_02075 0.58 +1.1
2,168,521 + MPMX20_02075 0.65 +1.1
2,168,526 + MPMX20_02075 0.66 -0.3
2,168,537 - MPMX20_02075 0.67 -0.4
2,168,563 - MPMX20_02075 0.70 -1.0
2,168,647 + MPMX20_02075 0.81 +0.7
2,168,654 - MPMX20_02075 0.81 -0.4
2,168,691 + MPMX20_02075 0.86 -2.1
2,168,716 + MPMX20_02075 0.89 +0.2
2,168,849 - +3.2
2,168,852 + +1.4
2,168,852 + -0.9
2,168,870 - -0.2
2,168,875 + -2.9
2,168,903 - MPMX20_02076 0.13 +1.4
2,168,996 - MPMX20_02076 0.25 -0.1
2,169,008 + MPMX20_02076 0.27 +1.3
2,169,213 - MPMX20_02076 0.53 -1.1
2,169,242 + MPMX20_02076 0.57 +1.5
2,169,250 - MPMX20_02076 0.58 -0.8
2,169,259 + MPMX20_02076 0.59 -3.5
2,169,272 - MPMX20_02076 0.61 -3.9
2,169,308 + MPMX20_02076 0.65 +1.6
2,169,309 + MPMX20_02076 0.65 -2.5
2,169,309 + MPMX20_02076 0.65 -2.7
2,169,313 + MPMX20_02076 0.66 +0.4
2,169,340 - MPMX20_02076 0.69 -0.2
2,169,363 - MPMX20_02076 0.72 -1.9
2,169,411 + MPMX20_02076 0.79 -2.6
2,169,411 + MPMX20_02076 0.79 +0.3
2,169,418 - MPMX20_02076 0.79 -2.5
2,169,419 - MPMX20_02076 0.80 -1.0
2,169,477 - MPMX20_02076 0.87 -0.5
2,169,485 - MPMX20_02076 0.88 +0.6
2,169,530 + -0.1
2,169,543 - +1.4
2,169,543 - -1.4
2,169,543 - -3.1
2,169,572 + +0.4
2,169,577 + +0.8
2,169,620 - +1.7
2,169,632 + +0.7
2,169,632 + +2.2
2,169,655 + MPMX20_02077 0.10 +2.0
2,169,665 + MPMX20_02077 0.12 -3.3
2,169,685 - MPMX20_02077 0.14 +1.2
2,169,730 - MPMX20_02077 0.21 +1.0
2,169,746 + MPMX20_02077 0.23 -1.7
2,169,770 - MPMX20_02077 0.26 +0.2
2,169,770 - MPMX20_02077 0.26 -0.7
2,169,919 + MPMX20_02077 0.47 +1.2
2,169,919 + MPMX20_02077 0.47 -0.4
2,169,919 + MPMX20_02077 0.47 -1.6
2,169,919 + MPMX20_02077 0.47 -0.8
2,169,927 - MPMX20_02077 0.48 -0.6
2,169,927 - MPMX20_02077 0.48 +1.9
2,169,977 + MPMX20_02077 0.55 -3.5
2,170,064 - MPMX20_02077 0.67 +1.4
2,170,086 - MPMX20_02077 0.70 -1.2
2,170,104 - MPMX20_02077 0.73 -1.4
2,170,131 - MPMX20_02077 0.77 +1.5
2,170,131 - MPMX20_02077 0.77 -0.4
2,170,131 - MPMX20_02077 0.77 +2.2
2,170,156 - MPMX20_02077 0.80 +0.5
2,170,165 + MPMX20_02077 0.81 +1.3
2,170,300 - +0.5
2,170,360 + +1.6
2,170,370 + -4.5
2,170,379 - MPMX20_02078 0.11 +1.6
2,170,384 + MPMX20_02078 0.12 +0.4
2,170,453 + MPMX20_02078 0.23 +0.7
2,170,453 + MPMX20_02078 0.23 +0.7
2,170,461 - MPMX20_02078 0.24 -2.4
2,170,493 - MPMX20_02078 0.29 +1.8
2,170,527 - MPMX20_02078 0.34 -2.3
2,170,541 + MPMX20_02078 0.36 +0.5
2,170,542 - MPMX20_02078 0.37 +0.3
2,170,558 + MPMX20_02078 0.39 +0.8

Or see this region's nucleotide sequence