Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04486

Experiment: Adenosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04484 and MPMX20_04485 are separated by 4 nucleotidesMPMX20_04485 and MPMX20_04486 overlap by 4 nucleotidesMPMX20_04486 and MPMX20_04487 overlap by 4 nucleotides MPMX20_04484: MPMX20_04484 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 4,688,153 to 4,689,283 _04484 MPMX20_04485: MPMX20_04485 - dTDP-fucosamine acetyltransferase, at 4,689,288 to 4,689,965 _04485 MPMX20_04486: MPMX20_04486 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 4,689,962 to 4,691,224 _04486 MPMX20_04487: MPMX20_04487 - UDP-N-acetylglucosamine 2-epimerase, at 4,691,221 to 4,692,306 _04487 Position (kb) 4689 4690 4691 4692Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4689.016 kb on + strand, within MPMX20_04484at 4689.016 kb on + strand, within MPMX20_04484at 4689.019 kb on - strand, within MPMX20_04484at 4689.024 kb on - strand, within MPMX20_04484at 4689.037 kb on + strand, within MPMX20_04484at 4689.052 kb on - strand, within MPMX20_04484at 4689.117 kb on + strand, within MPMX20_04484at 4689.193 kb on - strandat 4689.218 kb on + strandat 4689.218 kb on + strandat 4689.218 kb on + strandat 4689.226 kb on - strandat 4689.226 kb on - strandat 4689.374 kb on - strand, within MPMX20_04485at 4689.374 kb on - strand, within MPMX20_04485at 4689.388 kb on + strand, within MPMX20_04485at 4689.414 kb on + strand, within MPMX20_04485at 4689.450 kb on + strand, within MPMX20_04485at 4689.479 kb on + strand, within MPMX20_04485at 4689.554 kb on + strand, within MPMX20_04485at 4689.617 kb on + strand, within MPMX20_04485at 4689.621 kb on + strand, within MPMX20_04485at 4689.629 kb on - strand, within MPMX20_04485at 4689.654 kb on + strand, within MPMX20_04485at 4689.685 kb on - strand, within MPMX20_04485at 4689.687 kb on + strand, within MPMX20_04485at 4689.687 kb on + strand, within MPMX20_04485at 4689.690 kb on - strand, within MPMX20_04485at 4689.754 kb on - strand, within MPMX20_04485at 4689.754 kb on - strand, within MPMX20_04485at 4689.757 kb on + strand, within MPMX20_04485at 4689.765 kb on - strand, within MPMX20_04485at 4689.775 kb on - strand, within MPMX20_04485at 4689.808 kb on - strand, within MPMX20_04485at 4689.861 kb on + strand, within MPMX20_04485at 4689.861 kb on + strand, within MPMX20_04485at 4689.906 kb on - strandat 4690.003 kb on - strandat 4690.006 kb on + strandat 4690.174 kb on - strand, within MPMX20_04486at 4690.176 kb on + strand, within MPMX20_04486at 4690.184 kb on - strand, within MPMX20_04486at 4690.243 kb on + strand, within MPMX20_04486at 4690.243 kb on + strand, within MPMX20_04486at 4690.243 kb on + strand, within MPMX20_04486at 4690.251 kb on - strand, within MPMX20_04486at 4690.296 kb on - strand, within MPMX20_04486at 4690.311 kb on + strand, within MPMX20_04486at 4690.319 kb on - strand, within MPMX20_04486at 4690.319 kb on - strand, within MPMX20_04486at 4690.340 kb on - strand, within MPMX20_04486at 4690.422 kb on + strand, within MPMX20_04486at 4690.422 kb on + strand, within MPMX20_04486at 4690.436 kb on + strand, within MPMX20_04486at 4690.444 kb on - strand, within MPMX20_04486at 4690.509 kb on - strand, within MPMX20_04486at 4690.522 kb on - strand, within MPMX20_04486at 4690.671 kb on + strand, within MPMX20_04486at 4690.679 kb on - strand, within MPMX20_04486at 4690.722 kb on + strand, within MPMX20_04486at 4690.727 kb on + strand, within MPMX20_04486at 4690.727 kb on + strand, within MPMX20_04486at 4690.755 kb on - strand, within MPMX20_04486at 4690.755 kb on - strand, within MPMX20_04486at 4690.802 kb on + strand, within MPMX20_04486at 4690.810 kb on - strand, within MPMX20_04486at 4690.820 kb on - strand, within MPMX20_04486at 4690.888 kb on - strand, within MPMX20_04486at 4690.998 kb on + strand, within MPMX20_04486at 4691.060 kb on + strand, within MPMX20_04486at 4691.103 kb on - strandat 4691.174 kb on + strandat 4691.178 kb on - strandat 4691.239 kb on + strandat 4691.264 kb on + strandat 4691.264 kb on + strandat 4691.277 kb on - strandat 4691.289 kb on + strandat 4691.297 kb on - strandat 4691.382 kb on + strand, within MPMX20_04487at 4691.413 kb on - strand, within MPMX20_04487at 4691.439 kb on + strand, within MPMX20_04487at 4691.439 kb on + strand, within MPMX20_04487at 4691.442 kb on - strand, within MPMX20_04487at 4691.447 kb on - strand, within MPMX20_04487at 4691.517 kb on - strand, within MPMX20_04487at 4691.521 kb on + strand, within MPMX20_04487at 4691.577 kb on + strand, within MPMX20_04487at 4691.577 kb on + strand, within MPMX20_04487at 4691.582 kb on + strand, within MPMX20_04487at 4691.606 kb on + strand, within MPMX20_04487at 4691.614 kb on - strand, within MPMX20_04487at 4691.639 kb on + strand, within MPMX20_04487at 4691.647 kb on - strand, within MPMX20_04487at 4691.647 kb on - strand, within MPMX20_04487at 4691.756 kb on + strand, within MPMX20_04487at 4691.763 kb on - strand, within MPMX20_04487at 4691.918 kb on - strand, within MPMX20_04487at 4691.935 kb on + strand, within MPMX20_04487at 4691.943 kb on + strand, within MPMX20_04487at 4691.956 kb on - strand, within MPMX20_04487at 4691.972 kb on + strand, within MPMX20_04487at 4691.972 kb on + strand, within MPMX20_04487at 4691.980 kb on - strand, within MPMX20_04487at 4691.997 kb on - strand, within MPMX20_04487at 4692.092 kb on + strand, within MPMX20_04487at 4692.100 kb on - strand, within MPMX20_04487at 4692.149 kb on + strand, within MPMX20_04487at 4692.155 kb on - strand, within MPMX20_04487at 4692.155 kb on - strand, within MPMX20_04487at 4692.155 kb on - strand, within MPMX20_04487at 4692.162 kb on - strand, within MPMX20_04487at 4692.205 kb on - strandat 4692.209 kb on + strandat 4692.209 kb on + strandat 4692.217 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (C)
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4,689,016 + MPMX20_04484 0.76 -0.3
4,689,016 + MPMX20_04484 0.76 -1.0
4,689,019 - MPMX20_04484 0.77 -3.0
4,689,024 - MPMX20_04484 0.77 -0.9
4,689,037 + MPMX20_04484 0.78 +0.1
4,689,052 - MPMX20_04484 0.79 -0.9
4,689,117 + MPMX20_04484 0.85 -0.9
4,689,193 - -0.9
4,689,218 + -0.3
4,689,218 + -2.0
4,689,218 + +1.1
4,689,226 - -1.1
4,689,226 - -0.7
4,689,374 - MPMX20_04485 0.13 -1.4
4,689,374 - MPMX20_04485 0.13 -2.5
4,689,388 + MPMX20_04485 0.15 -0.3
4,689,414 + MPMX20_04485 0.19 -2.0
4,689,450 + MPMX20_04485 0.24 -2.4
4,689,479 + MPMX20_04485 0.28 -2.5
4,689,554 + MPMX20_04485 0.39 -0.4
4,689,617 + MPMX20_04485 0.49 -0.9
4,689,621 + MPMX20_04485 0.49 -2.9
4,689,629 - MPMX20_04485 0.50 -2.1
4,689,654 + MPMX20_04485 0.54 -0.2
4,689,685 - MPMX20_04485 0.59 -2.2
4,689,687 + MPMX20_04485 0.59 -2.9
4,689,687 + MPMX20_04485 0.59 -1.5
4,689,690 - MPMX20_04485 0.59 -0.9
4,689,754 - MPMX20_04485 0.69 -0.6
4,689,754 - MPMX20_04485 0.69 -1.3
4,689,757 + MPMX20_04485 0.69 -0.4
4,689,765 - MPMX20_04485 0.70 -0.8
4,689,775 - MPMX20_04485 0.72 -0.7
4,689,808 - MPMX20_04485 0.77 -0.2
4,689,861 + MPMX20_04485 0.85 -3.1
4,689,861 + MPMX20_04485 0.85 -2.1
4,689,906 - +0.6
4,690,003 - -1.6
4,690,006 + +0.3
4,690,174 - MPMX20_04486 0.17 -0.1
4,690,176 + MPMX20_04486 0.17 -1.2
4,690,184 - MPMX20_04486 0.18 +0.8
4,690,243 + MPMX20_04486 0.22 +0.2
4,690,243 + MPMX20_04486 0.22 -0.2
4,690,243 + MPMX20_04486 0.22 -0.6
4,690,251 - MPMX20_04486 0.23 -1.3
4,690,296 - MPMX20_04486 0.26 -0.3
4,690,311 + MPMX20_04486 0.28 +1.7
4,690,319 - MPMX20_04486 0.28 -0.1
4,690,319 - MPMX20_04486 0.28 -0.7
4,690,340 - MPMX20_04486 0.30 +0.5
4,690,422 + MPMX20_04486 0.36 -1.0
4,690,422 + MPMX20_04486 0.36 -0.9
4,690,436 + MPMX20_04486 0.38 -1.4
4,690,444 - MPMX20_04486 0.38 -1.3
4,690,509 - MPMX20_04486 0.43 -0.8
4,690,522 - MPMX20_04486 0.44 -0.7
4,690,671 + MPMX20_04486 0.56 -0.3
4,690,679 - MPMX20_04486 0.57 -0.7
4,690,722 + MPMX20_04486 0.60 -0.2
4,690,727 + MPMX20_04486 0.61 -0.3
4,690,727 + MPMX20_04486 0.61 -1.4
4,690,755 - MPMX20_04486 0.63 -0.8
4,690,755 - MPMX20_04486 0.63 +0.2
4,690,802 + MPMX20_04486 0.67 +0.9
4,690,810 - MPMX20_04486 0.67 -1.6
4,690,820 - MPMX20_04486 0.68 -2.7
4,690,888 - MPMX20_04486 0.73 -3.3
4,690,998 + MPMX20_04486 0.82 -0.5
4,691,060 + MPMX20_04486 0.87 -1.8
4,691,103 - +0.1
4,691,174 + +0.3
4,691,178 - +2.1
4,691,239 + -0.4
4,691,264 + -2.4
4,691,264 + +1.8
4,691,277 - -1.0
4,691,289 + -0.7
4,691,297 - -0.5
4,691,382 + MPMX20_04487 0.15 -1.8
4,691,413 - MPMX20_04487 0.18 -0.4
4,691,439 + MPMX20_04487 0.20 -0.6
4,691,439 + MPMX20_04487 0.20 +1.4
4,691,442 - MPMX20_04487 0.20 -2.0
4,691,447 - MPMX20_04487 0.21 -0.9
4,691,517 - MPMX20_04487 0.27 +0.3
4,691,521 + MPMX20_04487 0.28 +0.3
4,691,577 + MPMX20_04487 0.33 -0.7
4,691,577 + MPMX20_04487 0.33 -1.8
4,691,582 + MPMX20_04487 0.33 -0.9
4,691,606 + MPMX20_04487 0.35 -0.5
4,691,614 - MPMX20_04487 0.36 -1.0
4,691,639 + MPMX20_04487 0.38 +0.1
4,691,647 - MPMX20_04487 0.39 -1.0
4,691,647 - MPMX20_04487 0.39 -0.1
4,691,756 + MPMX20_04487 0.49 -1.4
4,691,763 - MPMX20_04487 0.50 +0.5
4,691,918 - MPMX20_04487 0.64 -1.3
4,691,935 + MPMX20_04487 0.66 -1.2
4,691,943 + MPMX20_04487 0.66 -0.5
4,691,956 - MPMX20_04487 0.68 +0.8
4,691,972 + MPMX20_04487 0.69 -0.5
4,691,972 + MPMX20_04487 0.69 -0.5
4,691,980 - MPMX20_04487 0.70 -0.7
4,691,997 - MPMX20_04487 0.71 -1.0
4,692,092 + MPMX20_04487 0.80 +0.1
4,692,100 - MPMX20_04487 0.81 -0.4
4,692,149 + MPMX20_04487 0.85 -0.0
4,692,155 - MPMX20_04487 0.86 +0.1
4,692,155 - MPMX20_04487 0.86 -0.8
4,692,155 - MPMX20_04487 0.86 -0.3
4,692,162 - MPMX20_04487 0.87 -1.6
4,692,205 - -2.7
4,692,209 + -0.3
4,692,209 + -0.4
4,692,217 - -3.0

Or see this region's nucleotide sequence