Experiment: Adenosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04484 and MPMX20_04485 are separated by 4 nucleotides MPMX20_04485 and MPMX20_04486 overlap by 4 nucleotides MPMX20_04486 and MPMX20_04487 overlap by 4 nucleotides
MPMX20_04484: MPMX20_04484 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 4,688,153 to 4,689,283
_04484
MPMX20_04485: MPMX20_04485 - dTDP-fucosamine acetyltransferase, at 4,689,288 to 4,689,965
_04485
MPMX20_04486: MPMX20_04486 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 4,689,962 to 4,691,224
_04486
MPMX20_04487: MPMX20_04487 - UDP-N-acetylglucosamine 2-epimerase, at 4,691,221 to 4,692,306
_04487
Position (kb)
4689
4690
4691
4692 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4689.016 kb on + strand, within MPMX20_04484 at 4689.016 kb on + strand, within MPMX20_04484 at 4689.019 kb on - strand, within MPMX20_04484 at 4689.024 kb on - strand, within MPMX20_04484 at 4689.037 kb on + strand, within MPMX20_04484 at 4689.052 kb on - strand, within MPMX20_04484 at 4689.117 kb on + strand, within MPMX20_04484 at 4689.193 kb on - strand at 4689.218 kb on + strand at 4689.218 kb on + strand at 4689.218 kb on + strand at 4689.226 kb on - strand at 4689.226 kb on - strand at 4689.374 kb on - strand, within MPMX20_04485 at 4689.374 kb on - strand, within MPMX20_04485 at 4689.388 kb on + strand, within MPMX20_04485 at 4689.414 kb on + strand, within MPMX20_04485 at 4689.450 kb on + strand, within MPMX20_04485 at 4689.479 kb on + strand, within MPMX20_04485 at 4689.554 kb on + strand, within MPMX20_04485 at 4689.617 kb on + strand, within MPMX20_04485 at 4689.621 kb on + strand, within MPMX20_04485 at 4689.629 kb on - strand, within MPMX20_04485 at 4689.654 kb on + strand, within MPMX20_04485 at 4689.685 kb on - strand, within MPMX20_04485 at 4689.687 kb on + strand, within MPMX20_04485 at 4689.687 kb on + strand, within MPMX20_04485 at 4689.690 kb on - strand, within MPMX20_04485 at 4689.754 kb on - strand, within MPMX20_04485 at 4689.754 kb on - strand, within MPMX20_04485 at 4689.757 kb on + strand, within MPMX20_04485 at 4689.765 kb on - strand, within MPMX20_04485 at 4689.775 kb on - strand, within MPMX20_04485 at 4689.808 kb on - strand, within MPMX20_04485 at 4689.861 kb on + strand, within MPMX20_04485 at 4689.861 kb on + strand, within MPMX20_04485 at 4689.906 kb on - strand at 4690.003 kb on - strand at 4690.006 kb on + strand at 4690.174 kb on - strand, within MPMX20_04486 at 4690.176 kb on + strand, within MPMX20_04486 at 4690.184 kb on - strand, within MPMX20_04486 at 4690.243 kb on + strand, within MPMX20_04486 at 4690.243 kb on + strand, within MPMX20_04486 at 4690.243 kb on + strand, within MPMX20_04486 at 4690.251 kb on - strand, within MPMX20_04486 at 4690.296 kb on - strand, within MPMX20_04486 at 4690.311 kb on + strand, within MPMX20_04486 at 4690.319 kb on - strand, within MPMX20_04486 at 4690.319 kb on - strand, within MPMX20_04486 at 4690.340 kb on - strand, within MPMX20_04486 at 4690.422 kb on + strand, within MPMX20_04486 at 4690.422 kb on + strand, within MPMX20_04486 at 4690.436 kb on + strand, within MPMX20_04486 at 4690.444 kb on - strand, within MPMX20_04486 at 4690.509 kb on - strand, within MPMX20_04486 at 4690.522 kb on - strand, within MPMX20_04486 at 4690.671 kb on + strand, within MPMX20_04486 at 4690.679 kb on - strand, within MPMX20_04486 at 4690.722 kb on + strand, within MPMX20_04486 at 4690.727 kb on + strand, within MPMX20_04486 at 4690.727 kb on + strand, within MPMX20_04486 at 4690.755 kb on - strand, within MPMX20_04486 at 4690.755 kb on - strand, within MPMX20_04486 at 4690.802 kb on + strand, within MPMX20_04486 at 4690.810 kb on - strand, within MPMX20_04486 at 4690.820 kb on - strand, within MPMX20_04486 at 4690.888 kb on - strand, within MPMX20_04486 at 4690.998 kb on + strand, within MPMX20_04486 at 4691.060 kb on + strand, within MPMX20_04486 at 4691.103 kb on - strand at 4691.174 kb on + strand at 4691.178 kb on - strand at 4691.239 kb on + strand at 4691.264 kb on + strand at 4691.264 kb on + strand at 4691.277 kb on - strand at 4691.289 kb on + strand at 4691.297 kb on - strand at 4691.382 kb on + strand, within MPMX20_04487 at 4691.413 kb on - strand, within MPMX20_04487 at 4691.439 kb on + strand, within MPMX20_04487 at 4691.439 kb on + strand, within MPMX20_04487 at 4691.442 kb on - strand, within MPMX20_04487 at 4691.447 kb on - strand, within MPMX20_04487 at 4691.517 kb on - strand, within MPMX20_04487 at 4691.521 kb on + strand, within MPMX20_04487 at 4691.577 kb on + strand, within MPMX20_04487 at 4691.577 kb on + strand, within MPMX20_04487 at 4691.582 kb on + strand, within MPMX20_04487 at 4691.606 kb on + strand, within MPMX20_04487 at 4691.614 kb on - strand, within MPMX20_04487 at 4691.639 kb on + strand, within MPMX20_04487 at 4691.647 kb on - strand, within MPMX20_04487 at 4691.647 kb on - strand, within MPMX20_04487 at 4691.756 kb on + strand, within MPMX20_04487 at 4691.763 kb on - strand, within MPMX20_04487 at 4691.918 kb on - strand, within MPMX20_04487 at 4691.935 kb on + strand, within MPMX20_04487 at 4691.943 kb on + strand, within MPMX20_04487 at 4691.956 kb on - strand, within MPMX20_04487 at 4691.972 kb on + strand, within MPMX20_04487 at 4691.972 kb on + strand, within MPMX20_04487 at 4691.980 kb on - strand, within MPMX20_04487 at 4691.997 kb on - strand, within MPMX20_04487 at 4692.092 kb on + strand, within MPMX20_04487 at 4692.100 kb on - strand, within MPMX20_04487 at 4692.149 kb on + strand, within MPMX20_04487 at 4692.155 kb on - strand, within MPMX20_04487 at 4692.155 kb on - strand, within MPMX20_04487 at 4692.155 kb on - strand, within MPMX20_04487 at 4692.162 kb on - strand, within MPMX20_04487 at 4692.205 kb on - strand at 4692.209 kb on + strand at 4692.209 kb on + strand at 4692.217 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (C) remove 4,689,016 + MPMX20_04484 0.76 -0.3 4,689,016 + MPMX20_04484 0.76 -1.0 4,689,019 - MPMX20_04484 0.77 -3.0 4,689,024 - MPMX20_04484 0.77 -0.9 4,689,037 + MPMX20_04484 0.78 +0.1 4,689,052 - MPMX20_04484 0.79 -0.9 4,689,117 + MPMX20_04484 0.85 -0.9 4,689,193 - -0.9 4,689,218 + -0.3 4,689,218 + -2.0 4,689,218 + +1.1 4,689,226 - -1.1 4,689,226 - -0.7 4,689,374 - MPMX20_04485 0.13 -1.4 4,689,374 - MPMX20_04485 0.13 -2.5 4,689,388 + MPMX20_04485 0.15 -0.3 4,689,414 + MPMX20_04485 0.19 -2.0 4,689,450 + MPMX20_04485 0.24 -2.4 4,689,479 + MPMX20_04485 0.28 -2.5 4,689,554 + MPMX20_04485 0.39 -0.4 4,689,617 + MPMX20_04485 0.49 -0.9 4,689,621 + MPMX20_04485 0.49 -2.9 4,689,629 - MPMX20_04485 0.50 -2.1 4,689,654 + MPMX20_04485 0.54 -0.2 4,689,685 - MPMX20_04485 0.59 -2.2 4,689,687 + MPMX20_04485 0.59 -2.9 4,689,687 + MPMX20_04485 0.59 -1.5 4,689,690 - MPMX20_04485 0.59 -0.9 4,689,754 - MPMX20_04485 0.69 -0.6 4,689,754 - MPMX20_04485 0.69 -1.3 4,689,757 + MPMX20_04485 0.69 -0.4 4,689,765 - MPMX20_04485 0.70 -0.8 4,689,775 - MPMX20_04485 0.72 -0.7 4,689,808 - MPMX20_04485 0.77 -0.2 4,689,861 + MPMX20_04485 0.85 -3.1 4,689,861 + MPMX20_04485 0.85 -2.1 4,689,906 - +0.6 4,690,003 - -1.6 4,690,006 + +0.3 4,690,174 - MPMX20_04486 0.17 -0.1 4,690,176 + MPMX20_04486 0.17 -1.2 4,690,184 - MPMX20_04486 0.18 +0.8 4,690,243 + MPMX20_04486 0.22 +0.2 4,690,243 + MPMX20_04486 0.22 -0.2 4,690,243 + MPMX20_04486 0.22 -0.6 4,690,251 - MPMX20_04486 0.23 -1.3 4,690,296 - MPMX20_04486 0.26 -0.3 4,690,311 + MPMX20_04486 0.28 +1.7 4,690,319 - MPMX20_04486 0.28 -0.1 4,690,319 - MPMX20_04486 0.28 -0.7 4,690,340 - MPMX20_04486 0.30 +0.5 4,690,422 + MPMX20_04486 0.36 -1.0 4,690,422 + MPMX20_04486 0.36 -0.9 4,690,436 + MPMX20_04486 0.38 -1.4 4,690,444 - MPMX20_04486 0.38 -1.3 4,690,509 - MPMX20_04486 0.43 -0.8 4,690,522 - MPMX20_04486 0.44 -0.7 4,690,671 + MPMX20_04486 0.56 -0.3 4,690,679 - MPMX20_04486 0.57 -0.7 4,690,722 + MPMX20_04486 0.60 -0.2 4,690,727 + MPMX20_04486 0.61 -0.3 4,690,727 + MPMX20_04486 0.61 -1.4 4,690,755 - MPMX20_04486 0.63 -0.8 4,690,755 - MPMX20_04486 0.63 +0.2 4,690,802 + MPMX20_04486 0.67 +0.9 4,690,810 - MPMX20_04486 0.67 -1.6 4,690,820 - MPMX20_04486 0.68 -2.7 4,690,888 - MPMX20_04486 0.73 -3.3 4,690,998 + MPMX20_04486 0.82 -0.5 4,691,060 + MPMX20_04486 0.87 -1.8 4,691,103 - +0.1 4,691,174 + +0.3 4,691,178 - +2.1 4,691,239 + -0.4 4,691,264 + -2.4 4,691,264 + +1.8 4,691,277 - -1.0 4,691,289 + -0.7 4,691,297 - -0.5 4,691,382 + MPMX20_04487 0.15 -1.8 4,691,413 - MPMX20_04487 0.18 -0.4 4,691,439 + MPMX20_04487 0.20 -0.6 4,691,439 + MPMX20_04487 0.20 +1.4 4,691,442 - MPMX20_04487 0.20 -2.0 4,691,447 - MPMX20_04487 0.21 -0.9 4,691,517 - MPMX20_04487 0.27 +0.3 4,691,521 + MPMX20_04487 0.28 +0.3 4,691,577 + MPMX20_04487 0.33 -0.7 4,691,577 + MPMX20_04487 0.33 -1.8 4,691,582 + MPMX20_04487 0.33 -0.9 4,691,606 + MPMX20_04487 0.35 -0.5 4,691,614 - MPMX20_04487 0.36 -1.0 4,691,639 + MPMX20_04487 0.38 +0.1 4,691,647 - MPMX20_04487 0.39 -1.0 4,691,647 - MPMX20_04487 0.39 -0.1 4,691,756 + MPMX20_04487 0.49 -1.4 4,691,763 - MPMX20_04487 0.50 +0.5 4,691,918 - MPMX20_04487 0.64 -1.3 4,691,935 + MPMX20_04487 0.66 -1.2 4,691,943 + MPMX20_04487 0.66 -0.5 4,691,956 - MPMX20_04487 0.68 +0.8 4,691,972 + MPMX20_04487 0.69 -0.5 4,691,972 + MPMX20_04487 0.69 -0.5 4,691,980 - MPMX20_04487 0.70 -0.7 4,691,997 - MPMX20_04487 0.71 -1.0 4,692,092 + MPMX20_04487 0.80 +0.1 4,692,100 - MPMX20_04487 0.81 -0.4 4,692,149 + MPMX20_04487 0.85 -0.0 4,692,155 - MPMX20_04487 0.86 +0.1 4,692,155 - MPMX20_04487 0.86 -0.8 4,692,155 - MPMX20_04487 0.86 -0.3 4,692,162 - MPMX20_04487 0.87 -1.6 4,692,205 - -2.7 4,692,209 + -0.3 4,692,209 + -0.4 4,692,217 - -3.0
Or see this region's nucleotide sequence