Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01977

Experiment: Adenosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01976 and MPMX20_01977 are separated by 115 nucleotidesMPMX20_01977 and MPMX20_01978 are separated by 16 nucleotides MPMX20_01976: MPMX20_01976 - Inner membrane transport protein YdhC, at 2,067,669 to 2,068,868 _01976 MPMX20_01977: MPMX20_01977 - putative HTH-type transcriptional regulator YahB, at 2,068,984 to 2,069,895 _01977 MPMX20_01978: MPMX20_01978 - HTH-type transcriptional repressor PurR, at 2,069,912 to 2,070,937 _01978 Position (kb) 2068 2069 2070Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2068.011 kb on + strand, within MPMX20_01976at 2068.012 kb on - strand, within MPMX20_01976at 2068.018 kb on + strand, within MPMX20_01976at 2068.145 kb on - strand, within MPMX20_01976at 2068.145 kb on - strand, within MPMX20_01976at 2068.233 kb on + strand, within MPMX20_01976at 2068.236 kb on - strand, within MPMX20_01976at 2068.269 kb on - strand, within MPMX20_01976at 2068.275 kb on + strand, within MPMX20_01976at 2068.327 kb on - strand, within MPMX20_01976at 2068.348 kb on + strand, within MPMX20_01976at 2068.441 kb on + strand, within MPMX20_01976at 2068.449 kb on - strand, within MPMX20_01976at 2068.450 kb on - strand, within MPMX20_01976at 2068.484 kb on + strand, within MPMX20_01976at 2068.517 kb on + strand, within MPMX20_01976at 2068.607 kb on + strand, within MPMX20_01976at 2068.692 kb on - strand, within MPMX20_01976at 2068.704 kb on + strand, within MPMX20_01976at 2068.712 kb on - strand, within MPMX20_01976at 2068.732 kb on - strand, within MPMX20_01976at 2068.733 kb on - strand, within MPMX20_01976at 2068.794 kb on + strandat 2068.794 kb on + strandat 2068.823 kb on + strandat 2068.824 kb on + strandat 2068.896 kb on - strandat 2068.909 kb on + strandat 2068.909 kb on + strandat 2068.909 kb on + strandat 2068.910 kb on + strandat 2068.911 kb on + strandat 2068.911 kb on + strandat 2068.911 kb on + strandat 2068.918 kb on - strandat 2068.919 kb on - strandat 2068.920 kb on + strandat 2068.920 kb on + strandat 2068.928 kb on - strandat 2068.928 kb on - strandat 2069.015 kb on + strandat 2069.044 kb on - strandat 2069.092 kb on - strand, within MPMX20_01977at 2069.136 kb on + strand, within MPMX20_01977at 2069.219 kb on + strand, within MPMX20_01977at 2069.219 kb on + strand, within MPMX20_01977at 2069.378 kb on - strand, within MPMX20_01977at 2069.378 kb on - strand, within MPMX20_01977at 2069.413 kb on - strand, within MPMX20_01977at 2069.458 kb on + strand, within MPMX20_01977at 2069.481 kb on - strand, within MPMX20_01977at 2069.521 kb on + strand, within MPMX20_01977at 2069.521 kb on + strand, within MPMX20_01977at 2069.529 kb on - strand, within MPMX20_01977at 2069.529 kb on - strand, within MPMX20_01977at 2069.529 kb on - strand, within MPMX20_01977at 2069.606 kb on - strand, within MPMX20_01977at 2069.620 kb on - strand, within MPMX20_01977at 2069.678 kb on + strand, within MPMX20_01977at 2069.678 kb on + strand, within MPMX20_01977at 2069.681 kb on - strand, within MPMX20_01977at 2069.686 kb on - strand, within MPMX20_01977at 2069.686 kb on - strand, within MPMX20_01977at 2069.721 kb on + strand, within MPMX20_01977at 2069.721 kb on + strand, within MPMX20_01977at 2069.729 kb on - strand, within MPMX20_01977at 2069.752 kb on - strand, within MPMX20_01977at 2069.752 kb on - strand, within MPMX20_01977at 2069.817 kb on - strandat 2069.834 kb on - strandat 2069.834 kb on - strandat 2069.834 kb on - strandat 2069.889 kb on + strandat 2069.993 kb on - strandat 2070.003 kb on - strandat 2070.008 kb on - strandat 2070.029 kb on + strand, within MPMX20_01978at 2070.033 kb on - strand, within MPMX20_01978at 2070.037 kb on - strand, within MPMX20_01978at 2070.039 kb on + strand, within MPMX20_01978at 2070.085 kb on + strand, within MPMX20_01978at 2070.087 kb on - strand, within MPMX20_01978at 2070.157 kb on + strand, within MPMX20_01978at 2070.206 kb on + strand, within MPMX20_01978at 2070.206 kb on + strand, within MPMX20_01978at 2070.206 kb on + strand, within MPMX20_01978at 2070.357 kb on + strand, within MPMX20_01978at 2070.365 kb on - strand, within MPMX20_01978at 2070.381 kb on + strand, within MPMX20_01978at 2070.385 kb on + strand, within MPMX20_01978at 2070.389 kb on - strand, within MPMX20_01978at 2070.396 kb on + strand, within MPMX20_01978at 2070.498 kb on - strand, within MPMX20_01978at 2070.562 kb on + strand, within MPMX20_01978at 2070.580 kb on - strand, within MPMX20_01978at 2070.664 kb on + strand, within MPMX20_01978at 2070.664 kb on + strand, within MPMX20_01978at 2070.664 kb on + strand, within MPMX20_01978at 2070.664 kb on + strand, within MPMX20_01978at 2070.664 kb on + strand, within MPMX20_01978at 2070.700 kb on + strand, within MPMX20_01978at 2070.756 kb on + strand, within MPMX20_01978at 2070.814 kb on - strand, within MPMX20_01978

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (C)
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2,068,011 + MPMX20_01976 0.28 -3.0
2,068,012 - MPMX20_01976 0.29 -4.4
2,068,018 + MPMX20_01976 0.29 -1.2
2,068,145 - MPMX20_01976 0.40 -2.4
2,068,145 - MPMX20_01976 0.40 -3.4
2,068,233 + MPMX20_01976 0.47 -2.5
2,068,236 - MPMX20_01976 0.47 -3.1
2,068,269 - MPMX20_01976 0.50 -2.6
2,068,275 + MPMX20_01976 0.51 -1.0
2,068,327 - MPMX20_01976 0.55 -3.5
2,068,348 + MPMX20_01976 0.57 -2.5
2,068,441 + MPMX20_01976 0.64 -2.5
2,068,449 - MPMX20_01976 0.65 -3.6
2,068,450 - MPMX20_01976 0.65 -3.9
2,068,484 + MPMX20_01976 0.68 -4.4
2,068,517 + MPMX20_01976 0.71 -2.5
2,068,607 + MPMX20_01976 0.78 -2.3
2,068,692 - MPMX20_01976 0.85 -2.1
2,068,704 + MPMX20_01976 0.86 -3.7
2,068,712 - MPMX20_01976 0.87 -2.6
2,068,732 - MPMX20_01976 0.89 -1.8
2,068,733 - MPMX20_01976 0.89 -3.5
2,068,794 + -1.4
2,068,794 + -1.5
2,068,823 + -2.4
2,068,824 + -0.8
2,068,896 - +0.6
2,068,909 + -1.8
2,068,909 + -3.4
2,068,909 + -2.1
2,068,910 + -2.6
2,068,911 + -1.4
2,068,911 + -1.7
2,068,911 + -0.6
2,068,918 - -1.1
2,068,919 - -2.7
2,068,920 + -1.5
2,068,920 + -2.3
2,068,928 - +0.8
2,068,928 - -1.6
2,069,015 + -2.2
2,069,044 - -2.1
2,069,092 - MPMX20_01977 0.12 -1.3
2,069,136 + MPMX20_01977 0.17 -1.5
2,069,219 + MPMX20_01977 0.26 -2.4
2,069,219 + MPMX20_01977 0.26 -2.3
2,069,378 - MPMX20_01977 0.43 +0.6
2,069,378 - MPMX20_01977 0.43 -1.5
2,069,413 - MPMX20_01977 0.47 -0.5
2,069,458 + MPMX20_01977 0.52 -0.5
2,069,481 - MPMX20_01977 0.54 -4.8
2,069,521 + MPMX20_01977 0.59 -1.4
2,069,521 + MPMX20_01977 0.59 -0.6
2,069,529 - MPMX20_01977 0.60 -1.5
2,069,529 - MPMX20_01977 0.60 -1.6
2,069,529 - MPMX20_01977 0.60 -2.4
2,069,606 - MPMX20_01977 0.68 -4.3
2,069,620 - MPMX20_01977 0.70 -1.9
2,069,678 + MPMX20_01977 0.76 -2.1
2,069,678 + MPMX20_01977 0.76 -1.6
2,069,681 - MPMX20_01977 0.76 -3.3
2,069,686 - MPMX20_01977 0.77 -2.5
2,069,686 - MPMX20_01977 0.77 -1.6
2,069,721 + MPMX20_01977 0.81 -1.8
2,069,721 + MPMX20_01977 0.81 -2.0
2,069,729 - MPMX20_01977 0.82 -2.0
2,069,752 - MPMX20_01977 0.84 -2.9
2,069,752 - MPMX20_01977 0.84 -1.5
2,069,817 - -3.2
2,069,834 - -2.9
2,069,834 - -2.6
2,069,834 - -3.6
2,069,889 + -0.5
2,069,993 - +0.5
2,070,003 - +0.1
2,070,008 - -0.6
2,070,029 + MPMX20_01978 0.11 +0.6
2,070,033 - MPMX20_01978 0.12 +0.1
2,070,037 - MPMX20_01978 0.12 -0.3
2,070,039 + MPMX20_01978 0.12 -0.4
2,070,085 + MPMX20_01978 0.17 +0.9
2,070,087 - MPMX20_01978 0.17 -0.3
2,070,157 + MPMX20_01978 0.24 -1.3
2,070,206 + MPMX20_01978 0.29 +0.3
2,070,206 + MPMX20_01978 0.29 +0.8
2,070,206 + MPMX20_01978 0.29 -0.9
2,070,357 + MPMX20_01978 0.43 +1.6
2,070,365 - MPMX20_01978 0.44 +0.1
2,070,381 + MPMX20_01978 0.46 +0.2
2,070,385 + MPMX20_01978 0.46 +1.1
2,070,389 - MPMX20_01978 0.46 +1.0
2,070,396 + MPMX20_01978 0.47 -0.0
2,070,498 - MPMX20_01978 0.57 +0.5
2,070,562 + MPMX20_01978 0.63 -1.3
2,070,580 - MPMX20_01978 0.65 -0.3
2,070,664 + MPMX20_01978 0.73 +0.9
2,070,664 + MPMX20_01978 0.73 +0.4
2,070,664 + MPMX20_01978 0.73 +1.3
2,070,664 + MPMX20_01978 0.73 +2.6
2,070,664 + MPMX20_01978 0.73 -1.3
2,070,700 + MPMX20_01978 0.77 -1.1
2,070,756 + MPMX20_01978 0.82 -0.5
2,070,814 - MPMX20_01978 0.88 +0.6

Or see this region's nucleotide sequence