Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02571

Experiment: Parabanic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02569 and MPMX20_02570 are separated by 140 nucleotidesMPMX20_02570 and MPMX20_02571 are separated by 334 nucleotidesMPMX20_02571 and MPMX20_02572 are separated by 282 nucleotidesMPMX20_02572 and MPMX20_02573 are separated by 25 nucleotides MPMX20_02569: MPMX20_02569 - Putative sulfur carrier protein YedF, at 2,708,095 to 2,708,328 _02569 MPMX20_02570: MPMX20_02570 - Universal stress protein F, at 2,708,469 to 2,708,903 _02570 MPMX20_02571: MPMX20_02571 - Outer membrane protein W, at 2,709,238 to 2,709,870 _02571 MPMX20_02572: MPMX20_02572 - hypothetical protein, at 2,710,153 to 2,710,557 _02572 MPMX20_02573: MPMX20_02573 - hypothetical protein, at 2,710,583 to 2,711,326 _02573 Position (kb) 2709 2710Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2708.265 kb on + strand, within MPMX20_02569at 2708.273 kb on - strand, within MPMX20_02569at 2708.273 kb on - strand, within MPMX20_02569at 2708.275 kb on + strand, within MPMX20_02569at 2708.283 kb on - strand, within MPMX20_02569at 2708.351 kb on - strandat 2708.353 kb on - strandat 2708.363 kb on - strandat 2708.410 kb on + strandat 2708.526 kb on - strand, within MPMX20_02570at 2708.533 kb on - strand, within MPMX20_02570at 2708.536 kb on + strand, within MPMX20_02570at 2708.538 kb on + strand, within MPMX20_02570at 2708.538 kb on + strand, within MPMX20_02570at 2708.538 kb on + strand, within MPMX20_02570at 2708.619 kb on + strand, within MPMX20_02570at 2708.619 kb on + strand, within MPMX20_02570at 2708.619 kb on + strand, within MPMX20_02570at 2708.624 kb on + strand, within MPMX20_02570at 2708.624 kb on + strand, within MPMX20_02570at 2708.627 kb on - strand, within MPMX20_02570at 2708.627 kb on - strand, within MPMX20_02570at 2708.627 kb on - strand, within MPMX20_02570at 2708.632 kb on - strand, within MPMX20_02570at 2708.692 kb on + strand, within MPMX20_02570at 2708.692 kb on + strand, within MPMX20_02570at 2708.710 kb on - strand, within MPMX20_02570at 2708.710 kb on - strand, within MPMX20_02570at 2708.710 kb on - strand, within MPMX20_02570at 2708.723 kb on + strand, within MPMX20_02570at 2708.724 kb on + strand, within MPMX20_02570at 2708.783 kb on + strand, within MPMX20_02570at 2708.788 kb on + strand, within MPMX20_02570at 2708.796 kb on - strand, within MPMX20_02570at 2708.836 kb on + strand, within MPMX20_02570at 2708.846 kb on + strand, within MPMX20_02570at 2708.897 kb on + strandat 2708.925 kb on + strandat 2708.962 kb on + strandat 2708.962 kb on + strandat 2708.962 kb on + strandat 2708.967 kb on + strandat 2708.968 kb on - strandat 2708.970 kb on - strandat 2708.975 kb on - strandat 2708.976 kb on - strandat 2709.003 kb on + strandat 2709.003 kb on + strandat 2709.061 kb on + strandat 2709.071 kb on + strandat 2709.077 kb on + strandat 2709.079 kb on - strandat 2709.082 kb on + strandat 2709.082 kb on + strandat 2709.090 kb on - strandat 2709.146 kb on - strandat 2709.153 kb on + strandat 2709.156 kb on - strandat 2709.165 kb on + strandat 2709.189 kb on - strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.205 kb on - strandat 2709.205 kb on - strandat 2709.207 kb on + strandat 2709.208 kb on + strandat 2709.213 kb on + strandat 2709.213 kb on + strandat 2709.215 kb on - strandat 2709.216 kb on - strandat 2709.216 kb on - strandat 2709.221 kb on - strandat 2709.221 kb on - strandat 2709.222 kb on + strandat 2709.223 kb on + strandat 2709.230 kb on - strandat 2709.230 kb on - strandat 2709.231 kb on - strandat 2709.385 kb on - strand, within MPMX20_02571at 2709.418 kb on + strand, within MPMX20_02571at 2709.424 kb on - strand, within MPMX20_02571at 2709.434 kb on - strand, within MPMX20_02571at 2709.497 kb on - strand, within MPMX20_02571at 2709.499 kb on + strand, within MPMX20_02571at 2709.507 kb on - strand, within MPMX20_02571at 2709.507 kb on - strand, within MPMX20_02571at 2709.507 kb on - strand, within MPMX20_02571at 2709.535 kb on - strand, within MPMX20_02571at 2709.535 kb on - strand, within MPMX20_02571at 2709.535 kb on - strand, within MPMX20_02571at 2709.536 kb on - strand, within MPMX20_02571at 2709.556 kb on - strand, within MPMX20_02571at 2709.556 kb on - strand, within MPMX20_02571at 2709.609 kb on + strand, within MPMX20_02571at 2709.610 kb on + strand, within MPMX20_02571at 2709.617 kb on - strand, within MPMX20_02571at 2709.617 kb on - strand, within MPMX20_02571at 2709.644 kb on + strand, within MPMX20_02571at 2709.644 kb on + strand, within MPMX20_02571at 2709.667 kb on - strand, within MPMX20_02571at 2709.688 kb on + strand, within MPMX20_02571at 2709.696 kb on - strand, within MPMX20_02571at 2709.696 kb on - strand, within MPMX20_02571at 2709.702 kb on + strand, within MPMX20_02571at 2709.702 kb on + strand, within MPMX20_02571at 2709.710 kb on - strand, within MPMX20_02571at 2709.710 kb on - strand, within MPMX20_02571at 2709.717 kb on + strand, within MPMX20_02571at 2709.717 kb on + strand, within MPMX20_02571at 2709.717 kb on + strand, within MPMX20_02571at 2709.741 kb on - strand, within MPMX20_02571at 2709.758 kb on + strand, within MPMX20_02571at 2709.764 kb on - strand, within MPMX20_02571at 2709.843 kb on - strandat 2709.843 kb on - strandat 2709.891 kb on - strandat 2709.911 kb on - strandat 2710.011 kb on - strandat 2710.011 kb on - strandat 2710.017 kb on + strandat 2710.025 kb on - strandat 2710.081 kb on - strandat 2710.081 kb on - strandat 2710.081 kb on - strandat 2710.096 kb on + strandat 2710.104 kb on - strandat 2710.155 kb on + strandat 2710.168 kb on - strandat 2710.218 kb on - strand, within MPMX20_02572at 2710.222 kb on + strand, within MPMX20_02572at 2710.230 kb on - strand, within MPMX20_02572at 2710.272 kb on + strand, within MPMX20_02572at 2710.390 kb on - strand, within MPMX20_02572at 2710.427 kb on - strand, within MPMX20_02572at 2710.428 kb on + strand, within MPMX20_02572at 2710.428 kb on + strand, within MPMX20_02572at 2710.432 kb on + strand, within MPMX20_02572at 2710.440 kb on + strand, within MPMX20_02572at 2710.520 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.525 kb on + strandat 2710.533 kb on - strandat 2710.533 kb on - strandat 2710.535 kb on + strandat 2710.535 kb on - strandat 2710.543 kb on - strandat 2710.577 kb on - strandat 2710.579 kb on + strandat 2710.579 kb on + strandat 2710.599 kb on + strandat 2710.639 kb on + strandat 2710.639 kb on + strandat 2710.666 kb on + strand, within MPMX20_02573at 2710.678 kb on + strand, within MPMX20_02573at 2710.678 kb on + strand, within MPMX20_02573at 2710.686 kb on - strand, within MPMX20_02573at 2710.688 kb on + strand, within MPMX20_02573at 2710.739 kb on - strand, within MPMX20_02573at 2710.769 kb on - strand, within MPMX20_02573at 2710.769 kb on - strand, within MPMX20_02573at 2710.804 kb on + strand, within MPMX20_02573at 2710.832 kb on + strand, within MPMX20_02573

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Per-strain Table

Position Strand Gene LocusTag Fraction Parabanic Acid (C)
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2,708,265 + MPMX20_02569 0.73 +2.2
2,708,273 - MPMX20_02569 0.76 -2.3
2,708,273 - MPMX20_02569 0.76 -3.0
2,708,275 + MPMX20_02569 0.77 +1.0
2,708,283 - MPMX20_02569 0.80 -1.1
2,708,351 - +2.2
2,708,353 - +0.0
2,708,363 - +0.7
2,708,410 + +0.1
2,708,526 - MPMX20_02570 0.13 -0.5
2,708,533 - MPMX20_02570 0.15 -0.6
2,708,536 + MPMX20_02570 0.15 -3.1
2,708,538 + MPMX20_02570 0.16 -2.7
2,708,538 + MPMX20_02570 0.16 +0.7
2,708,538 + MPMX20_02570 0.16 -2.1
2,708,619 + MPMX20_02570 0.34 -2.8
2,708,619 + MPMX20_02570 0.34 -3.0
2,708,619 + MPMX20_02570 0.34 +0.6
2,708,624 + MPMX20_02570 0.36 -0.5
2,708,624 + MPMX20_02570 0.36 +1.6
2,708,627 - MPMX20_02570 0.36 -3.3
2,708,627 - MPMX20_02570 0.36 -0.3
2,708,627 - MPMX20_02570 0.36 -0.2
2,708,632 - MPMX20_02570 0.37 +0.0
2,708,692 + MPMX20_02570 0.51 +1.3
2,708,692 + MPMX20_02570 0.51 +0.5
2,708,710 - MPMX20_02570 0.55 -0.9
2,708,710 - MPMX20_02570 0.55 +0.0
2,708,710 - MPMX20_02570 0.55 -1.1
2,708,723 + MPMX20_02570 0.58 +1.6
2,708,724 + MPMX20_02570 0.59 +1.0
2,708,783 + MPMX20_02570 0.72 +2.1
2,708,788 + MPMX20_02570 0.73 +0.6
2,708,796 - MPMX20_02570 0.75 -3.1
2,708,836 + MPMX20_02570 0.84 +0.1
2,708,846 + MPMX20_02570 0.87 +3.0
2,708,897 + +1.4
2,708,925 + -0.5
2,708,962 + -3.1
2,708,962 + -3.2
2,708,962 + -2.7
2,708,967 + -3.6
2,708,968 - -1.9
2,708,970 - -1.1
2,708,975 - +0.2
2,708,976 - -1.8
2,709,003 + +1.3
2,709,003 + -0.5
2,709,061 + +2.0
2,709,071 + -2.4
2,709,077 + -1.7
2,709,079 - +0.9
2,709,082 + +0.3
2,709,082 + -0.9
2,709,090 - -2.8
2,709,146 - -1.9
2,709,153 + +0.2
2,709,156 - -0.2
2,709,165 + +0.8
2,709,189 - +2.0
2,709,197 + +2.5
2,709,197 + +0.9
2,709,197 + +0.5
2,709,197 + +2.5
2,709,197 + -2.6
2,709,197 + +0.1
2,709,197 + -0.3
2,709,205 - +1.6
2,709,205 - -0.5
2,709,207 + -3.3
2,709,208 + -3.1
2,709,213 + -3.1
2,709,213 + +0.6
2,709,215 - +1.3
2,709,216 - +0.9
2,709,216 - -2.9
2,709,221 - -0.3
2,709,221 - -4.0
2,709,222 + -1.9
2,709,223 + -0.8
2,709,230 - -1.4
2,709,230 - +0.7
2,709,231 - +0.8
2,709,385 - MPMX20_02571 0.23 +0.7
2,709,418 + MPMX20_02571 0.28 -0.9
2,709,424 - MPMX20_02571 0.29 -2.9
2,709,434 - MPMX20_02571 0.31 +1.0
2,709,497 - MPMX20_02571 0.41 -4.0
2,709,499 + MPMX20_02571 0.41 -2.9
2,709,507 - MPMX20_02571 0.42 -2.1
2,709,507 - MPMX20_02571 0.42 -1.6
2,709,507 - MPMX20_02571 0.42 -1.1
2,709,535 - MPMX20_02571 0.47 +0.6
2,709,535 - MPMX20_02571 0.47 -0.6
2,709,535 - MPMX20_02571 0.47 -3.6
2,709,536 - MPMX20_02571 0.47 -0.0
2,709,556 - MPMX20_02571 0.50 -3.2
2,709,556 - MPMX20_02571 0.50 -2.0
2,709,609 + MPMX20_02571 0.59 -2.3
2,709,610 + MPMX20_02571 0.59 -3.5
2,709,617 - MPMX20_02571 0.60 -3.7
2,709,617 - MPMX20_02571 0.60 -4.0
2,709,644 + MPMX20_02571 0.64 -2.3
2,709,644 + MPMX20_02571 0.64 -1.3
2,709,667 - MPMX20_02571 0.68 +1.4
2,709,688 + MPMX20_02571 0.71 -0.6
2,709,696 - MPMX20_02571 0.72 -4.4
2,709,696 - MPMX20_02571 0.72 -0.2
2,709,702 + MPMX20_02571 0.73 -2.6
2,709,702 + MPMX20_02571 0.73 +0.5
2,709,710 - MPMX20_02571 0.75 +0.6
2,709,710 - MPMX20_02571 0.75 -0.3
2,709,717 + MPMX20_02571 0.76 +0.5
2,709,717 + MPMX20_02571 0.76 -0.8
2,709,717 + MPMX20_02571 0.76 -3.5
2,709,741 - MPMX20_02571 0.79 -2.1
2,709,758 + MPMX20_02571 0.82 -2.3
2,709,764 - MPMX20_02571 0.83 -2.1
2,709,843 - -0.2
2,709,843 - -1.9
2,709,891 - +0.5
2,709,911 - +1.5
2,710,011 - -1.3
2,710,011 - -1.0
2,710,017 + -0.7
2,710,025 - -0.7
2,710,081 - +1.0
2,710,081 - +0.5
2,710,081 - -3.5
2,710,096 + -0.8
2,710,104 - -0.4
2,710,155 + +0.8
2,710,168 - +1.5
2,710,218 - MPMX20_02572 0.16 -1.3
2,710,222 + MPMX20_02572 0.17 -4.1
2,710,230 - MPMX20_02572 0.19 -0.8
2,710,272 + MPMX20_02572 0.29 +0.7
2,710,390 - MPMX20_02572 0.59 -0.2
2,710,427 - MPMX20_02572 0.68 +2.9
2,710,428 + MPMX20_02572 0.68 +1.5
2,710,428 + MPMX20_02572 0.68 -2.1
2,710,432 + MPMX20_02572 0.69 +0.9
2,710,440 + MPMX20_02572 0.71 -0.3
2,710,520 + +0.2
2,710,525 + +1.8
2,710,525 + +0.4
2,710,525 + +1.4
2,710,525 + +0.2
2,710,525 + -0.9
2,710,525 + +0.1
2,710,533 - -1.4
2,710,533 - +0.4
2,710,535 + -3.1
2,710,535 - -1.9
2,710,543 - -0.5
2,710,577 - -0.9
2,710,579 + +0.6
2,710,579 + -1.6
2,710,599 + -1.3
2,710,639 + -1.5
2,710,639 + -2.6
2,710,666 + MPMX20_02573 0.11 -0.1
2,710,678 + MPMX20_02573 0.13 -2.8
2,710,678 + MPMX20_02573 0.13 -1.9
2,710,686 - MPMX20_02573 0.14 -0.5
2,710,688 + MPMX20_02573 0.14 -1.4
2,710,739 - MPMX20_02573 0.21 +1.7
2,710,769 - MPMX20_02573 0.25 -2.7
2,710,769 - MPMX20_02573 0.25 -2.4
2,710,804 + MPMX20_02573 0.30 -2.0
2,710,832 + MPMX20_02573 0.33 +0.8

Or see this region's nucleotide sequence