Experiment: Parabanic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02242 and MPMX20_02243 are separated by 92 nucleotides MPMX20_02243 and MPMX20_02244 are separated by 80 nucleotides
MPMX20_02242: MPMX20_02242 - Inner membrane protein YdcO, at 2,354,459 to 2,355,625
_02242
MPMX20_02243: MPMX20_02243 - HTH-type transcriptional regulator SutR, at 2,355,718 to 2,356,245
_02243
MPMX20_02244: MPMX20_02244 - 23S rRNA 5-hydroxycytidine synthase, at 2,356,326 to 2,358,290
_02244
Position (kb)
2355
2356
2357 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2354.853 kb on + strand, within MPMX20_02242 at 2354.893 kb on - strand, within MPMX20_02242 at 2354.954 kb on - strand, within MPMX20_02242 at 2354.975 kb on + strand, within MPMX20_02242 at 2354.977 kb on - strand, within MPMX20_02242 at 2354.980 kb on + strand, within MPMX20_02242 at 2354.980 kb on + strand, within MPMX20_02242 at 2354.988 kb on - strand, within MPMX20_02242 at 2354.988 kb on - strand, within MPMX20_02242 at 2354.988 kb on - strand, within MPMX20_02242 at 2354.997 kb on - strand, within MPMX20_02242 at 2355.004 kb on + strand, within MPMX20_02242 at 2355.012 kb on - strand, within MPMX20_02242 at 2355.012 kb on - strand, within MPMX20_02242 at 2355.214 kb on + strand, within MPMX20_02242 at 2355.214 kb on + strand, within MPMX20_02242 at 2355.214 kb on + strand, within MPMX20_02242 at 2355.214 kb on + strand, within MPMX20_02242 at 2355.222 kb on - strand, within MPMX20_02242 at 2355.222 kb on - strand, within MPMX20_02242 at 2355.222 kb on - strand, within MPMX20_02242 at 2355.303 kb on + strand, within MPMX20_02242 at 2355.358 kb on + strand, within MPMX20_02242 at 2355.358 kb on + strand, within MPMX20_02242 at 2355.358 kb on + strand, within MPMX20_02242 at 2355.358 kb on + strand, within MPMX20_02242 at 2355.358 kb on + strand, within MPMX20_02242 at 2355.360 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.366 kb on - strand, within MPMX20_02242 at 2355.408 kb on - strand, within MPMX20_02242 at 2355.461 kb on + strand, within MPMX20_02242 at 2355.473 kb on + strand, within MPMX20_02242 at 2355.539 kb on + strand at 2355.566 kb on + strand at 2355.620 kb on - strand at 2355.670 kb on + strand at 2355.725 kb on + strand at 2355.816 kb on + strand, within MPMX20_02243 at 2355.840 kb on + strand, within MPMX20_02243 at 2355.851 kb on + strand, within MPMX20_02243 at 2355.925 kb on + strand, within MPMX20_02243 at 2355.940 kb on - strand, within MPMX20_02243 at 2355.955 kb on - strand, within MPMX20_02243 at 2355.960 kb on + strand, within MPMX20_02243 at 2356.014 kb on + strand, within MPMX20_02243 at 2356.067 kb on - strand, within MPMX20_02243 at 2356.077 kb on - strand, within MPMX20_02243 at 2356.237 kb on - strand at 2356.276 kb on + strand at 2356.279 kb on - strand at 2356.420 kb on + strand at 2356.463 kb on - strand at 2356.491 kb on - strand at 2356.495 kb on - strand at 2356.510 kb on + strand at 2356.556 kb on + strand, within MPMX20_02244 at 2356.556 kb on + strand, within MPMX20_02244 at 2356.564 kb on - strand, within MPMX20_02244 at 2356.564 kb on - strand, within MPMX20_02244 at 2356.564 kb on - strand, within MPMX20_02244 at 2356.622 kb on + strand, within MPMX20_02244 at 2356.622 kb on + strand, within MPMX20_02244 at 2356.622 kb on + strand, within MPMX20_02244 at 2356.622 kb on + strand, within MPMX20_02244 at 2356.622 kb on + strand, within MPMX20_02244 at 2356.630 kb on - strand, within MPMX20_02244 at 2356.630 kb on - strand, within MPMX20_02244 at 2356.630 kb on - strand, within MPMX20_02244 at 2356.654 kb on + strand, within MPMX20_02244 at 2356.667 kb on + strand, within MPMX20_02244 at 2356.667 kb on + strand, within MPMX20_02244 at 2356.669 kb on + strand, within MPMX20_02244 at 2356.669 kb on + strand, within MPMX20_02244 at 2356.675 kb on - strand, within MPMX20_02244 at 2356.677 kb on - strand, within MPMX20_02244 at 2356.677 kb on - strand, within MPMX20_02244 at 2356.677 kb on - strand, within MPMX20_02244 at 2356.677 kb on - strand, within MPMX20_02244 at 2356.677 kb on - strand, within MPMX20_02244 at 2356.693 kb on + strand, within MPMX20_02244 at 2356.719 kb on + strand, within MPMX20_02244 at 2356.840 kb on + strand, within MPMX20_02244 at 2356.840 kb on + strand, within MPMX20_02244 at 2356.840 kb on + strand, within MPMX20_02244 at 2356.900 kb on + strand, within MPMX20_02244 at 2356.908 kb on - strand, within MPMX20_02244 at 2356.919 kb on + strand, within MPMX20_02244 at 2356.946 kb on - strand, within MPMX20_02244 at 2356.951 kb on - strand, within MPMX20_02244 at 2357.018 kb on + strand, within MPMX20_02244 at 2357.036 kb on - strand, within MPMX20_02244 at 2357.072 kb on - strand, within MPMX20_02244 at 2357.079 kb on + strand, within MPMX20_02244 at 2357.147 kb on + strand, within MPMX20_02244 at 2357.196 kb on + strand, within MPMX20_02244 at 2357.207 kb on + strand, within MPMX20_02244 at 2357.207 kb on + strand, within MPMX20_02244 at 2357.215 kb on - strand, within MPMX20_02244 at 2357.241 kb on + strand, within MPMX20_02244
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (C) remove 2,354,853 + MPMX20_02242 0.34 -0.9 2,354,893 - MPMX20_02242 0.37 +3.1 2,354,954 - MPMX20_02242 0.42 -0.4 2,354,975 + MPMX20_02242 0.44 +0.2 2,354,977 - MPMX20_02242 0.44 -0.5 2,354,980 + MPMX20_02242 0.45 -1.7 2,354,980 + MPMX20_02242 0.45 +0.4 2,354,988 - MPMX20_02242 0.45 -2.8 2,354,988 - MPMX20_02242 0.45 +0.4 2,354,988 - MPMX20_02242 0.45 -2.4 2,354,997 - MPMX20_02242 0.46 -0.5 2,355,004 + MPMX20_02242 0.47 +2.5 2,355,012 - MPMX20_02242 0.47 -3.8 2,355,012 - MPMX20_02242 0.47 +0.4 2,355,214 + MPMX20_02242 0.65 +0.1 2,355,214 + MPMX20_02242 0.65 -3.2 2,355,214 + MPMX20_02242 0.65 +0.6 2,355,214 + MPMX20_02242 0.65 -2.1 2,355,222 - MPMX20_02242 0.65 +0.5 2,355,222 - MPMX20_02242 0.65 -2.9 2,355,222 - MPMX20_02242 0.65 -1.3 2,355,303 + MPMX20_02242 0.72 -0.4 2,355,358 + MPMX20_02242 0.77 +0.1 2,355,358 + MPMX20_02242 0.77 +1.4 2,355,358 + MPMX20_02242 0.77 -0.4 2,355,358 + MPMX20_02242 0.77 +2.1 2,355,358 + MPMX20_02242 0.77 +1.2 2,355,360 - MPMX20_02242 0.77 -1.0 2,355,366 - MPMX20_02242 0.78 -3.4 2,355,366 - MPMX20_02242 0.78 -3.4 2,355,366 - MPMX20_02242 0.78 +1.4 2,355,366 - MPMX20_02242 0.78 -1.5 2,355,366 - MPMX20_02242 0.78 +1.2 2,355,366 - MPMX20_02242 0.78 +0.7 2,355,366 - MPMX20_02242 0.78 +2.1 2,355,366 - MPMX20_02242 0.78 +0.4 2,355,366 - MPMX20_02242 0.78 +0.7 2,355,366 - MPMX20_02242 0.78 +2.0 2,355,366 - MPMX20_02242 0.78 -1.5 2,355,366 - MPMX20_02242 0.78 +0.9 2,355,408 - MPMX20_02242 0.81 -0.1 2,355,461 + MPMX20_02242 0.86 +1.1 2,355,473 + MPMX20_02242 0.87 +0.6 2,355,539 + +1.2 2,355,566 + -0.1 2,355,620 - -2.9 2,355,670 + -1.1 2,355,725 + -2.9 2,355,816 + MPMX20_02243 0.19 -1.6 2,355,840 + MPMX20_02243 0.23 +1.2 2,355,851 + MPMX20_02243 0.25 +0.7 2,355,925 + MPMX20_02243 0.39 +0.1 2,355,940 - MPMX20_02243 0.42 -0.9 2,355,955 - MPMX20_02243 0.45 -3.1 2,355,960 + MPMX20_02243 0.46 -3.6 2,356,014 + MPMX20_02243 0.56 -3.3 2,356,067 - MPMX20_02243 0.66 -4.4 2,356,077 - MPMX20_02243 0.68 -1.5 2,356,237 - +0.3 2,356,276 + -1.0 2,356,279 - -2.1 2,356,420 + +1.0 2,356,463 - +0.4 2,356,491 - +3.1 2,356,495 - -0.2 2,356,510 + +1.0 2,356,556 + MPMX20_02244 0.12 -2.8 2,356,556 + MPMX20_02244 0.12 -0.0 2,356,564 - MPMX20_02244 0.12 -1.3 2,356,564 - MPMX20_02244 0.12 -0.6 2,356,564 - MPMX20_02244 0.12 +0.6 2,356,622 + MPMX20_02244 0.15 +0.6 2,356,622 + MPMX20_02244 0.15 -0.4 2,356,622 + MPMX20_02244 0.15 -0.1 2,356,622 + MPMX20_02244 0.15 -2.6 2,356,622 + MPMX20_02244 0.15 +0.7 2,356,630 - MPMX20_02244 0.15 +1.4 2,356,630 - MPMX20_02244 0.15 +1.2 2,356,630 - MPMX20_02244 0.15 -2.7 2,356,654 + MPMX20_02244 0.17 -0.5 2,356,667 + MPMX20_02244 0.17 -2.5 2,356,667 + MPMX20_02244 0.17 -0.1 2,356,669 + MPMX20_02244 0.17 +1.1 2,356,669 + MPMX20_02244 0.17 -2.0 2,356,675 - MPMX20_02244 0.18 -2.5 2,356,677 - MPMX20_02244 0.18 +1.6 2,356,677 - MPMX20_02244 0.18 +0.6 2,356,677 - MPMX20_02244 0.18 +0.6 2,356,677 - MPMX20_02244 0.18 +2.8 2,356,677 - MPMX20_02244 0.18 -1.9 2,356,693 + MPMX20_02244 0.19 -3.3 2,356,719 + MPMX20_02244 0.20 -0.6 2,356,840 + MPMX20_02244 0.26 -1.1 2,356,840 + MPMX20_02244 0.26 +2.2 2,356,840 + MPMX20_02244 0.26 +1.3 2,356,900 + MPMX20_02244 0.29 -0.4 2,356,908 - MPMX20_02244 0.30 +1.1 2,356,919 + MPMX20_02244 0.30 -2.5 2,356,946 - MPMX20_02244 0.32 +1.6 2,356,951 - MPMX20_02244 0.32 -4.0 2,357,018 + MPMX20_02244 0.35 +1.7 2,357,036 - MPMX20_02244 0.36 +0.7 2,357,072 - MPMX20_02244 0.38 -0.4 2,357,079 + MPMX20_02244 0.38 +0.3 2,357,147 + MPMX20_02244 0.42 +0.9 2,357,196 + MPMX20_02244 0.44 +0.6 2,357,207 + MPMX20_02244 0.45 -1.0 2,357,207 + MPMX20_02244 0.45 +3.2 2,357,215 - MPMX20_02244 0.45 +2.0 2,357,241 + MPMX20_02244 0.47 -3.8
Or see this region's nucleotide sequence