Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02243

Experiment: Parabanic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02242 and MPMX20_02243 are separated by 92 nucleotidesMPMX20_02243 and MPMX20_02244 are separated by 80 nucleotides MPMX20_02242: MPMX20_02242 - Inner membrane protein YdcO, at 2,354,459 to 2,355,625 _02242 MPMX20_02243: MPMX20_02243 - HTH-type transcriptional regulator SutR, at 2,355,718 to 2,356,245 _02243 MPMX20_02244: MPMX20_02244 - 23S rRNA 5-hydroxycytidine synthase, at 2,356,326 to 2,358,290 _02244 Position (kb) 2355 2356 2357Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2354.853 kb on + strand, within MPMX20_02242at 2354.893 kb on - strand, within MPMX20_02242at 2354.954 kb on - strand, within MPMX20_02242at 2354.975 kb on + strand, within MPMX20_02242at 2354.977 kb on - strand, within MPMX20_02242at 2354.980 kb on + strand, within MPMX20_02242at 2354.980 kb on + strand, within MPMX20_02242at 2354.988 kb on - strand, within MPMX20_02242at 2354.988 kb on - strand, within MPMX20_02242at 2354.988 kb on - strand, within MPMX20_02242at 2354.997 kb on - strand, within MPMX20_02242at 2355.004 kb on + strand, within MPMX20_02242at 2355.012 kb on - strand, within MPMX20_02242at 2355.012 kb on - strand, within MPMX20_02242at 2355.214 kb on + strand, within MPMX20_02242at 2355.214 kb on + strand, within MPMX20_02242at 2355.214 kb on + strand, within MPMX20_02242at 2355.214 kb on + strand, within MPMX20_02242at 2355.222 kb on - strand, within MPMX20_02242at 2355.222 kb on - strand, within MPMX20_02242at 2355.222 kb on - strand, within MPMX20_02242at 2355.303 kb on + strand, within MPMX20_02242at 2355.358 kb on + strand, within MPMX20_02242at 2355.358 kb on + strand, within MPMX20_02242at 2355.358 kb on + strand, within MPMX20_02242at 2355.358 kb on + strand, within MPMX20_02242at 2355.358 kb on + strand, within MPMX20_02242at 2355.360 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.366 kb on - strand, within MPMX20_02242at 2355.408 kb on - strand, within MPMX20_02242at 2355.461 kb on + strand, within MPMX20_02242at 2355.473 kb on + strand, within MPMX20_02242at 2355.539 kb on + strandat 2355.566 kb on + strandat 2355.620 kb on - strandat 2355.670 kb on + strandat 2355.725 kb on + strandat 2355.816 kb on + strand, within MPMX20_02243at 2355.840 kb on + strand, within MPMX20_02243at 2355.851 kb on + strand, within MPMX20_02243at 2355.925 kb on + strand, within MPMX20_02243at 2355.940 kb on - strand, within MPMX20_02243at 2355.955 kb on - strand, within MPMX20_02243at 2355.960 kb on + strand, within MPMX20_02243at 2356.014 kb on + strand, within MPMX20_02243at 2356.067 kb on - strand, within MPMX20_02243at 2356.077 kb on - strand, within MPMX20_02243at 2356.237 kb on - strandat 2356.276 kb on + strandat 2356.279 kb on - strandat 2356.420 kb on + strandat 2356.463 kb on - strandat 2356.491 kb on - strandat 2356.495 kb on - strandat 2356.510 kb on + strandat 2356.556 kb on + strand, within MPMX20_02244at 2356.556 kb on + strand, within MPMX20_02244at 2356.564 kb on - strand, within MPMX20_02244at 2356.564 kb on - strand, within MPMX20_02244at 2356.564 kb on - strand, within MPMX20_02244at 2356.622 kb on + strand, within MPMX20_02244at 2356.622 kb on + strand, within MPMX20_02244at 2356.622 kb on + strand, within MPMX20_02244at 2356.622 kb on + strand, within MPMX20_02244at 2356.622 kb on + strand, within MPMX20_02244at 2356.630 kb on - strand, within MPMX20_02244at 2356.630 kb on - strand, within MPMX20_02244at 2356.630 kb on - strand, within MPMX20_02244at 2356.654 kb on + strand, within MPMX20_02244at 2356.667 kb on + strand, within MPMX20_02244at 2356.667 kb on + strand, within MPMX20_02244at 2356.669 kb on + strand, within MPMX20_02244at 2356.669 kb on + strand, within MPMX20_02244at 2356.675 kb on - strand, within MPMX20_02244at 2356.677 kb on - strand, within MPMX20_02244at 2356.677 kb on - strand, within MPMX20_02244at 2356.677 kb on - strand, within MPMX20_02244at 2356.677 kb on - strand, within MPMX20_02244at 2356.677 kb on - strand, within MPMX20_02244at 2356.693 kb on + strand, within MPMX20_02244at 2356.719 kb on + strand, within MPMX20_02244at 2356.840 kb on + strand, within MPMX20_02244at 2356.840 kb on + strand, within MPMX20_02244at 2356.840 kb on + strand, within MPMX20_02244at 2356.900 kb on + strand, within MPMX20_02244at 2356.908 kb on - strand, within MPMX20_02244at 2356.919 kb on + strand, within MPMX20_02244at 2356.946 kb on - strand, within MPMX20_02244at 2356.951 kb on - strand, within MPMX20_02244at 2357.018 kb on + strand, within MPMX20_02244at 2357.036 kb on - strand, within MPMX20_02244at 2357.072 kb on - strand, within MPMX20_02244at 2357.079 kb on + strand, within MPMX20_02244at 2357.147 kb on + strand, within MPMX20_02244at 2357.196 kb on + strand, within MPMX20_02244at 2357.207 kb on + strand, within MPMX20_02244at 2357.207 kb on + strand, within MPMX20_02244at 2357.215 kb on - strand, within MPMX20_02244at 2357.241 kb on + strand, within MPMX20_02244

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Per-strain Table

Position Strand Gene LocusTag Fraction Parabanic Acid (C)
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2,354,853 + MPMX20_02242 0.34 -0.9
2,354,893 - MPMX20_02242 0.37 +3.1
2,354,954 - MPMX20_02242 0.42 -0.4
2,354,975 + MPMX20_02242 0.44 +0.2
2,354,977 - MPMX20_02242 0.44 -0.5
2,354,980 + MPMX20_02242 0.45 -1.7
2,354,980 + MPMX20_02242 0.45 +0.4
2,354,988 - MPMX20_02242 0.45 -2.8
2,354,988 - MPMX20_02242 0.45 +0.4
2,354,988 - MPMX20_02242 0.45 -2.4
2,354,997 - MPMX20_02242 0.46 -0.5
2,355,004 + MPMX20_02242 0.47 +2.5
2,355,012 - MPMX20_02242 0.47 -3.8
2,355,012 - MPMX20_02242 0.47 +0.4
2,355,214 + MPMX20_02242 0.65 +0.1
2,355,214 + MPMX20_02242 0.65 -3.2
2,355,214 + MPMX20_02242 0.65 +0.6
2,355,214 + MPMX20_02242 0.65 -2.1
2,355,222 - MPMX20_02242 0.65 +0.5
2,355,222 - MPMX20_02242 0.65 -2.9
2,355,222 - MPMX20_02242 0.65 -1.3
2,355,303 + MPMX20_02242 0.72 -0.4
2,355,358 + MPMX20_02242 0.77 +0.1
2,355,358 + MPMX20_02242 0.77 +1.4
2,355,358 + MPMX20_02242 0.77 -0.4
2,355,358 + MPMX20_02242 0.77 +2.1
2,355,358 + MPMX20_02242 0.77 +1.2
2,355,360 - MPMX20_02242 0.77 -1.0
2,355,366 - MPMX20_02242 0.78 -3.4
2,355,366 - MPMX20_02242 0.78 -3.4
2,355,366 - MPMX20_02242 0.78 +1.4
2,355,366 - MPMX20_02242 0.78 -1.5
2,355,366 - MPMX20_02242 0.78 +1.2
2,355,366 - MPMX20_02242 0.78 +0.7
2,355,366 - MPMX20_02242 0.78 +2.1
2,355,366 - MPMX20_02242 0.78 +0.4
2,355,366 - MPMX20_02242 0.78 +0.7
2,355,366 - MPMX20_02242 0.78 +2.0
2,355,366 - MPMX20_02242 0.78 -1.5
2,355,366 - MPMX20_02242 0.78 +0.9
2,355,408 - MPMX20_02242 0.81 -0.1
2,355,461 + MPMX20_02242 0.86 +1.1
2,355,473 + MPMX20_02242 0.87 +0.6
2,355,539 + +1.2
2,355,566 + -0.1
2,355,620 - -2.9
2,355,670 + -1.1
2,355,725 + -2.9
2,355,816 + MPMX20_02243 0.19 -1.6
2,355,840 + MPMX20_02243 0.23 +1.2
2,355,851 + MPMX20_02243 0.25 +0.7
2,355,925 + MPMX20_02243 0.39 +0.1
2,355,940 - MPMX20_02243 0.42 -0.9
2,355,955 - MPMX20_02243 0.45 -3.1
2,355,960 + MPMX20_02243 0.46 -3.6
2,356,014 + MPMX20_02243 0.56 -3.3
2,356,067 - MPMX20_02243 0.66 -4.4
2,356,077 - MPMX20_02243 0.68 -1.5
2,356,237 - +0.3
2,356,276 + -1.0
2,356,279 - -2.1
2,356,420 + +1.0
2,356,463 - +0.4
2,356,491 - +3.1
2,356,495 - -0.2
2,356,510 + +1.0
2,356,556 + MPMX20_02244 0.12 -2.8
2,356,556 + MPMX20_02244 0.12 -0.0
2,356,564 - MPMX20_02244 0.12 -1.3
2,356,564 - MPMX20_02244 0.12 -0.6
2,356,564 - MPMX20_02244 0.12 +0.6
2,356,622 + MPMX20_02244 0.15 +0.6
2,356,622 + MPMX20_02244 0.15 -0.4
2,356,622 + MPMX20_02244 0.15 -0.1
2,356,622 + MPMX20_02244 0.15 -2.6
2,356,622 + MPMX20_02244 0.15 +0.7
2,356,630 - MPMX20_02244 0.15 +1.4
2,356,630 - MPMX20_02244 0.15 +1.2
2,356,630 - MPMX20_02244 0.15 -2.7
2,356,654 + MPMX20_02244 0.17 -0.5
2,356,667 + MPMX20_02244 0.17 -2.5
2,356,667 + MPMX20_02244 0.17 -0.1
2,356,669 + MPMX20_02244 0.17 +1.1
2,356,669 + MPMX20_02244 0.17 -2.0
2,356,675 - MPMX20_02244 0.18 -2.5
2,356,677 - MPMX20_02244 0.18 +1.6
2,356,677 - MPMX20_02244 0.18 +0.6
2,356,677 - MPMX20_02244 0.18 +0.6
2,356,677 - MPMX20_02244 0.18 +2.8
2,356,677 - MPMX20_02244 0.18 -1.9
2,356,693 + MPMX20_02244 0.19 -3.3
2,356,719 + MPMX20_02244 0.20 -0.6
2,356,840 + MPMX20_02244 0.26 -1.1
2,356,840 + MPMX20_02244 0.26 +2.2
2,356,840 + MPMX20_02244 0.26 +1.3
2,356,900 + MPMX20_02244 0.29 -0.4
2,356,908 - MPMX20_02244 0.30 +1.1
2,356,919 + MPMX20_02244 0.30 -2.5
2,356,946 - MPMX20_02244 0.32 +1.6
2,356,951 - MPMX20_02244 0.32 -4.0
2,357,018 + MPMX20_02244 0.35 +1.7
2,357,036 - MPMX20_02244 0.36 +0.7
2,357,072 - MPMX20_02244 0.38 -0.4
2,357,079 + MPMX20_02244 0.38 +0.3
2,357,147 + MPMX20_02244 0.42 +0.9
2,357,196 + MPMX20_02244 0.44 +0.6
2,357,207 + MPMX20_02244 0.45 -1.0
2,357,207 + MPMX20_02244 0.45 +3.2
2,357,215 - MPMX20_02244 0.45 +2.0
2,357,241 + MPMX20_02244 0.47 -3.8

Or see this region's nucleotide sequence