Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01714

Experiment: Parabanic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01713 and MPMX20_01714 are separated by 302 nucleotidesMPMX20_01714 and MPMX20_01715 are separated by 232 nucleotides MPMX20_01713: MPMX20_01713 - HTH-type transcriptional regulator DmlR, at 1,811,907 to 1,812,812 _01713 MPMX20_01714: MPMX20_01714 - tRNA-Ser, at 1,813,115 to 1,813,202 _01714 MPMX20_01715: MPMX20_01715 - Glyoxylate/hydroxypyruvate reductase A, at 1,813,435 to 1,814,373 _01715 Position (kb) 1813 1814Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1812.197 kb on - strand, within MPMX20_01713at 1812.219 kb on + strand, within MPMX20_01713at 1812.259 kb on + strand, within MPMX20_01713at 1812.438 kb on + strand, within MPMX20_01713at 1812.446 kb on - strand, within MPMX20_01713at 1812.452 kb on - strand, within MPMX20_01713at 1812.454 kb on + strand, within MPMX20_01713at 1812.454 kb on + strand, within MPMX20_01713at 1812.454 kb on + strand, within MPMX20_01713at 1812.454 kb on + strand, within MPMX20_01713at 1812.454 kb on + strand, within MPMX20_01713at 1812.454 kb on + strand, within MPMX20_01713at 1812.462 kb on - strand, within MPMX20_01713at 1812.462 kb on - strand, within MPMX20_01713at 1812.462 kb on - strand, within MPMX20_01713at 1812.462 kb on - strand, within MPMX20_01713at 1812.462 kb on - strand, within MPMX20_01713at 1812.472 kb on + strand, within MPMX20_01713at 1812.480 kb on - strand, within MPMX20_01713at 1812.519 kb on - strand, within MPMX20_01713at 1812.529 kb on - strand, within MPMX20_01713at 1812.529 kb on - strand, within MPMX20_01713at 1812.572 kb on - strand, within MPMX20_01713at 1812.593 kb on + strand, within MPMX20_01713at 1812.721 kb on - strand, within MPMX20_01713at 1812.750 kb on - strandat 1812.754 kb on - strandat 1812.837 kb on + strandat 1812.838 kb on - strandat 1812.852 kb on - strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.861 kb on + strandat 1812.862 kb on - strandat 1812.863 kb on + strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1812.869 kb on - strandat 1813.401 kb on + strandat 1813.511 kb on - strandat 1813.552 kb on - strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.563 kb on + strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.571 kb on - strand, within MPMX20_01715at 1813.588 kb on + strand, within MPMX20_01715at 1813.588 kb on + strand, within MPMX20_01715at 1813.595 kb on + strand, within MPMX20_01715at 1813.596 kb on - strand, within MPMX20_01715at 1813.665 kb on + strand, within MPMX20_01715at 1813.734 kb on + strand, within MPMX20_01715at 1813.737 kb on - strand, within MPMX20_01715at 1813.790 kb on + strand, within MPMX20_01715at 1813.862 kb on + strand, within MPMX20_01715at 1813.865 kb on - strand, within MPMX20_01715at 1813.870 kb on - strand, within MPMX20_01715at 1813.877 kb on + strand, within MPMX20_01715at 1813.908 kb on + strand, within MPMX20_01715at 1813.933 kb on - strand, within MPMX20_01715at 1813.933 kb on - strand, within MPMX20_01715at 1814.003 kb on + strand, within MPMX20_01715at 1814.011 kb on - strand, within MPMX20_01715at 1814.024 kb on - strand, within MPMX20_01715at 1814.068 kb on - strand, within MPMX20_01715at 1814.070 kb on + strand, within MPMX20_01715at 1814.086 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.117 kb on + strand, within MPMX20_01715at 1814.125 kb on - strand, within MPMX20_01715at 1814.125 kb on - strand, within MPMX20_01715at 1814.125 kb on - strand, within MPMX20_01715at 1814.149 kb on + strand, within MPMX20_01715at 1814.188 kb on + strand, within MPMX20_01715at 1814.198 kb on - strand, within MPMX20_01715

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Per-strain Table

Position Strand Gene LocusTag Fraction Parabanic Acid (C)
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1,812,197 - MPMX20_01713 0.32 +2.2
1,812,219 + MPMX20_01713 0.34 +0.1
1,812,259 + MPMX20_01713 0.39 -0.2
1,812,438 + MPMX20_01713 0.59 +1.2
1,812,446 - MPMX20_01713 0.59 +1.3
1,812,452 - MPMX20_01713 0.60 +0.3
1,812,454 + MPMX20_01713 0.60 +1.7
1,812,454 + MPMX20_01713 0.60 -0.6
1,812,454 + MPMX20_01713 0.60 +0.5
1,812,454 + MPMX20_01713 0.60 +0.2
1,812,454 + MPMX20_01713 0.60 +1.5
1,812,454 + MPMX20_01713 0.60 +0.9
1,812,462 - MPMX20_01713 0.61 +1.3
1,812,462 - MPMX20_01713 0.61 +3.1
1,812,462 - MPMX20_01713 0.61 -1.0
1,812,462 - MPMX20_01713 0.61 -0.3
1,812,462 - MPMX20_01713 0.61 +1.4
1,812,472 + MPMX20_01713 0.62 -2.7
1,812,480 - MPMX20_01713 0.63 -1.8
1,812,519 - MPMX20_01713 0.68 -1.6
1,812,529 - MPMX20_01713 0.69 -0.5
1,812,529 - MPMX20_01713 0.69 +0.7
1,812,572 - MPMX20_01713 0.73 -0.0
1,812,593 + MPMX20_01713 0.76 +0.6
1,812,721 - MPMX20_01713 0.90 -1.8
1,812,750 - +0.1
1,812,754 - -3.3
1,812,837 + -1.0
1,812,838 - -4.2
1,812,852 - +0.8
1,812,861 + -0.4
1,812,861 + +0.2
1,812,861 + -0.6
1,812,861 + -1.8
1,812,861 + +1.3
1,812,861 + -2.0
1,812,861 + -1.8
1,812,861 + +1.8
1,812,861 + -0.8
1,812,861 + +1.8
1,812,861 + -3.0
1,812,861 + -3.1
1,812,861 + +0.8
1,812,861 + -0.7
1,812,861 + +0.3
1,812,861 + -3.0
1,812,861 + -2.3
1,812,861 + -1.5
1,812,861 + -2.0
1,812,862 - +0.5
1,812,863 + -0.5
1,812,869 - -4.0
1,812,869 - -0.3
1,812,869 - -1.8
1,812,869 - -2.6
1,812,869 - -1.0
1,812,869 - +0.5
1,812,869 - -1.2
1,812,869 - +1.5
1,812,869 - -2.4
1,812,869 - -3.2
1,812,869 - +1.3
1,812,869 - +0.6
1,812,869 - -4.4
1,812,869 - +0.2
1,812,869 - +0.7
1,812,869 - -0.3
1,812,869 - -0.6
1,812,869 - +1.5
1,812,869 - +2.8
1,812,869 - -1.8
1,812,869 - -1.8
1,812,869 - +1.0
1,813,401 + +0.7
1,813,511 - -0.5
1,813,552 - MPMX20_01715 0.12 -3.3
1,813,563 + MPMX20_01715 0.14 -1.2
1,813,563 + MPMX20_01715 0.14 +1.2
1,813,563 + MPMX20_01715 0.14 -0.8
1,813,563 + MPMX20_01715 0.14 -1.2
1,813,563 + MPMX20_01715 0.14 +0.8
1,813,563 + MPMX20_01715 0.14 -1.2
1,813,563 + MPMX20_01715 0.14 +0.8
1,813,571 - MPMX20_01715 0.14 -0.2
1,813,571 - MPMX20_01715 0.14 -2.4
1,813,571 - MPMX20_01715 0.14 -0.2
1,813,571 - MPMX20_01715 0.14 +0.8
1,813,571 - MPMX20_01715 0.14 +0.0
1,813,571 - MPMX20_01715 0.14 -0.2
1,813,571 - MPMX20_01715 0.14 +0.1
1,813,571 - MPMX20_01715 0.14 -0.1
1,813,588 + MPMX20_01715 0.16 -0.8
1,813,588 + MPMX20_01715 0.16 -1.1
1,813,595 + MPMX20_01715 0.17 +1.6
1,813,596 - MPMX20_01715 0.17 +0.7
1,813,665 + MPMX20_01715 0.24 +3.0
1,813,734 + MPMX20_01715 0.32 +0.6
1,813,737 - MPMX20_01715 0.32 -3.5
1,813,790 + MPMX20_01715 0.38 -0.3
1,813,862 + MPMX20_01715 0.45 +0.2
1,813,865 - MPMX20_01715 0.46 -2.1
1,813,870 - MPMX20_01715 0.46 -3.8
1,813,877 + MPMX20_01715 0.47 +1.9
1,813,908 + MPMX20_01715 0.50 -0.4
1,813,933 - MPMX20_01715 0.53 -0.2
1,813,933 - MPMX20_01715 0.53 +1.1
1,814,003 + MPMX20_01715 0.60 -2.4
1,814,011 - MPMX20_01715 0.61 +0.2
1,814,024 - MPMX20_01715 0.63 +1.1
1,814,068 - MPMX20_01715 0.67 +0.9
1,814,070 + MPMX20_01715 0.68 -3.1
1,814,086 + MPMX20_01715 0.69 +1.4
1,814,117 + MPMX20_01715 0.73 +1.3
1,814,117 + MPMX20_01715 0.73 -1.1
1,814,117 + MPMX20_01715 0.73 -0.2
1,814,117 + MPMX20_01715 0.73 +1.6
1,814,117 + MPMX20_01715 0.73 -0.3
1,814,117 + MPMX20_01715 0.73 +1.3
1,814,117 + MPMX20_01715 0.73 +0.8
1,814,125 - MPMX20_01715 0.73 -0.8
1,814,125 - MPMX20_01715 0.73 +1.8
1,814,125 - MPMX20_01715 0.73 -4.7
1,814,149 + MPMX20_01715 0.76 -3.2
1,814,188 + MPMX20_01715 0.80 +0.9
1,814,198 - MPMX20_01715 0.81 +0.3

Or see this region's nucleotide sequence