Experiment: Parabanic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01713 and MPMX20_01714 are separated by 302 nucleotides MPMX20_01714 and MPMX20_01715 are separated by 232 nucleotides
MPMX20_01713: MPMX20_01713 - HTH-type transcriptional regulator DmlR, at 1,811,907 to 1,812,812
_01713
MPMX20_01714: MPMX20_01714 - tRNA-Ser, at 1,813,115 to 1,813,202
_01714
MPMX20_01715: MPMX20_01715 - Glyoxylate/hydroxypyruvate reductase A, at 1,813,435 to 1,814,373
_01715
Position (kb)
1813
1814 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1812.197 kb on - strand, within MPMX20_01713 at 1812.219 kb on + strand, within MPMX20_01713 at 1812.259 kb on + strand, within MPMX20_01713 at 1812.438 kb on + strand, within MPMX20_01713 at 1812.446 kb on - strand, within MPMX20_01713 at 1812.452 kb on - strand, within MPMX20_01713 at 1812.454 kb on + strand, within MPMX20_01713 at 1812.454 kb on + strand, within MPMX20_01713 at 1812.454 kb on + strand, within MPMX20_01713 at 1812.454 kb on + strand, within MPMX20_01713 at 1812.454 kb on + strand, within MPMX20_01713 at 1812.454 kb on + strand, within MPMX20_01713 at 1812.462 kb on - strand, within MPMX20_01713 at 1812.462 kb on - strand, within MPMX20_01713 at 1812.462 kb on - strand, within MPMX20_01713 at 1812.462 kb on - strand, within MPMX20_01713 at 1812.462 kb on - strand, within MPMX20_01713 at 1812.472 kb on + strand, within MPMX20_01713 at 1812.480 kb on - strand, within MPMX20_01713 at 1812.519 kb on - strand, within MPMX20_01713 at 1812.529 kb on - strand, within MPMX20_01713 at 1812.529 kb on - strand, within MPMX20_01713 at 1812.572 kb on - strand, within MPMX20_01713 at 1812.593 kb on + strand, within MPMX20_01713 at 1812.721 kb on - strand, within MPMX20_01713 at 1812.750 kb on - strand at 1812.754 kb on - strand at 1812.837 kb on + strand at 1812.838 kb on - strand at 1812.852 kb on - strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.861 kb on + strand at 1812.862 kb on - strand at 1812.863 kb on + strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1812.869 kb on - strand at 1813.401 kb on + strand at 1813.511 kb on - strand at 1813.552 kb on - strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.563 kb on + strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.571 kb on - strand, within MPMX20_01715 at 1813.588 kb on + strand, within MPMX20_01715 at 1813.588 kb on + strand, within MPMX20_01715 at 1813.595 kb on + strand, within MPMX20_01715 at 1813.596 kb on - strand, within MPMX20_01715 at 1813.665 kb on + strand, within MPMX20_01715 at 1813.734 kb on + strand, within MPMX20_01715 at 1813.737 kb on - strand, within MPMX20_01715 at 1813.790 kb on + strand, within MPMX20_01715 at 1813.862 kb on + strand, within MPMX20_01715 at 1813.865 kb on - strand, within MPMX20_01715 at 1813.870 kb on - strand, within MPMX20_01715 at 1813.877 kb on + strand, within MPMX20_01715 at 1813.908 kb on + strand, within MPMX20_01715 at 1813.933 kb on - strand, within MPMX20_01715 at 1813.933 kb on - strand, within MPMX20_01715 at 1814.003 kb on + strand, within MPMX20_01715 at 1814.011 kb on - strand, within MPMX20_01715 at 1814.024 kb on - strand, within MPMX20_01715 at 1814.068 kb on - strand, within MPMX20_01715 at 1814.070 kb on + strand, within MPMX20_01715 at 1814.086 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.117 kb on + strand, within MPMX20_01715 at 1814.125 kb on - strand, within MPMX20_01715 at 1814.125 kb on - strand, within MPMX20_01715 at 1814.125 kb on - strand, within MPMX20_01715 at 1814.149 kb on + strand, within MPMX20_01715 at 1814.188 kb on + strand, within MPMX20_01715 at 1814.198 kb on - strand, within MPMX20_01715
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (C) remove 1,812,197 - MPMX20_01713 0.32 +2.2 1,812,219 + MPMX20_01713 0.34 +0.1 1,812,259 + MPMX20_01713 0.39 -0.2 1,812,438 + MPMX20_01713 0.59 +1.2 1,812,446 - MPMX20_01713 0.59 +1.3 1,812,452 - MPMX20_01713 0.60 +0.3 1,812,454 + MPMX20_01713 0.60 +1.7 1,812,454 + MPMX20_01713 0.60 -0.6 1,812,454 + MPMX20_01713 0.60 +0.5 1,812,454 + MPMX20_01713 0.60 +0.2 1,812,454 + MPMX20_01713 0.60 +1.5 1,812,454 + MPMX20_01713 0.60 +0.9 1,812,462 - MPMX20_01713 0.61 +1.3 1,812,462 - MPMX20_01713 0.61 +3.1 1,812,462 - MPMX20_01713 0.61 -1.0 1,812,462 - MPMX20_01713 0.61 -0.3 1,812,462 - MPMX20_01713 0.61 +1.4 1,812,472 + MPMX20_01713 0.62 -2.7 1,812,480 - MPMX20_01713 0.63 -1.8 1,812,519 - MPMX20_01713 0.68 -1.6 1,812,529 - MPMX20_01713 0.69 -0.5 1,812,529 - MPMX20_01713 0.69 +0.7 1,812,572 - MPMX20_01713 0.73 -0.0 1,812,593 + MPMX20_01713 0.76 +0.6 1,812,721 - MPMX20_01713 0.90 -1.8 1,812,750 - +0.1 1,812,754 - -3.3 1,812,837 + -1.0 1,812,838 - -4.2 1,812,852 - +0.8 1,812,861 + -0.4 1,812,861 + +0.2 1,812,861 + -0.6 1,812,861 + -1.8 1,812,861 + +1.3 1,812,861 + -2.0 1,812,861 + -1.8 1,812,861 + +1.8 1,812,861 + -0.8 1,812,861 + +1.8 1,812,861 + -3.0 1,812,861 + -3.1 1,812,861 + +0.8 1,812,861 + -0.7 1,812,861 + +0.3 1,812,861 + -3.0 1,812,861 + -2.3 1,812,861 + -1.5 1,812,861 + -2.0 1,812,862 - +0.5 1,812,863 + -0.5 1,812,869 - -4.0 1,812,869 - -0.3 1,812,869 - -1.8 1,812,869 - -2.6 1,812,869 - -1.0 1,812,869 - +0.5 1,812,869 - -1.2 1,812,869 - +1.5 1,812,869 - -2.4 1,812,869 - -3.2 1,812,869 - +1.3 1,812,869 - +0.6 1,812,869 - -4.4 1,812,869 - +0.2 1,812,869 - +0.7 1,812,869 - -0.3 1,812,869 - -0.6 1,812,869 - +1.5 1,812,869 - +2.8 1,812,869 - -1.8 1,812,869 - -1.8 1,812,869 - +1.0 1,813,401 + +0.7 1,813,511 - -0.5 1,813,552 - MPMX20_01715 0.12 -3.3 1,813,563 + MPMX20_01715 0.14 -1.2 1,813,563 + MPMX20_01715 0.14 +1.2 1,813,563 + MPMX20_01715 0.14 -0.8 1,813,563 + MPMX20_01715 0.14 -1.2 1,813,563 + MPMX20_01715 0.14 +0.8 1,813,563 + MPMX20_01715 0.14 -1.2 1,813,563 + MPMX20_01715 0.14 +0.8 1,813,571 - MPMX20_01715 0.14 -0.2 1,813,571 - MPMX20_01715 0.14 -2.4 1,813,571 - MPMX20_01715 0.14 -0.2 1,813,571 - MPMX20_01715 0.14 +0.8 1,813,571 - MPMX20_01715 0.14 +0.0 1,813,571 - MPMX20_01715 0.14 -0.2 1,813,571 - MPMX20_01715 0.14 +0.1 1,813,571 - MPMX20_01715 0.14 -0.1 1,813,588 + MPMX20_01715 0.16 -0.8 1,813,588 + MPMX20_01715 0.16 -1.1 1,813,595 + MPMX20_01715 0.17 +1.6 1,813,596 - MPMX20_01715 0.17 +0.7 1,813,665 + MPMX20_01715 0.24 +3.0 1,813,734 + MPMX20_01715 0.32 +0.6 1,813,737 - MPMX20_01715 0.32 -3.5 1,813,790 + MPMX20_01715 0.38 -0.3 1,813,862 + MPMX20_01715 0.45 +0.2 1,813,865 - MPMX20_01715 0.46 -2.1 1,813,870 - MPMX20_01715 0.46 -3.8 1,813,877 + MPMX20_01715 0.47 +1.9 1,813,908 + MPMX20_01715 0.50 -0.4 1,813,933 - MPMX20_01715 0.53 -0.2 1,813,933 - MPMX20_01715 0.53 +1.1 1,814,003 + MPMX20_01715 0.60 -2.4 1,814,011 - MPMX20_01715 0.61 +0.2 1,814,024 - MPMX20_01715 0.63 +1.1 1,814,068 - MPMX20_01715 0.67 +0.9 1,814,070 + MPMX20_01715 0.68 -3.1 1,814,086 + MPMX20_01715 0.69 +1.4 1,814,117 + MPMX20_01715 0.73 +1.3 1,814,117 + MPMX20_01715 0.73 -1.1 1,814,117 + MPMX20_01715 0.73 -0.2 1,814,117 + MPMX20_01715 0.73 +1.6 1,814,117 + MPMX20_01715 0.73 -0.3 1,814,117 + MPMX20_01715 0.73 +1.3 1,814,117 + MPMX20_01715 0.73 +0.8 1,814,125 - MPMX20_01715 0.73 -0.8 1,814,125 - MPMX20_01715 0.73 +1.8 1,814,125 - MPMX20_01715 0.73 -4.7 1,814,149 + MPMX20_01715 0.76 -3.2 1,814,188 + MPMX20_01715 0.80 +0.9 1,814,198 - MPMX20_01715 0.81 +0.3
Or see this region's nucleotide sequence