Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04044

Experiment: D-Glucosamine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04042 and MPMX20_04043 are separated by 15 nucleotidesMPMX20_04043 and MPMX20_04044 overlap by 4 nucleotidesMPMX20_04044 and MPMX20_04045 are separated by 246 nucleotides MPMX20_04042: MPMX20_04042 - PTS system mannose-specific EIID component, at 4,239,509 to 4,240,387 _04042 MPMX20_04043: MPMX20_04043 - hypothetical protein, at 4,240,403 to 4,240,837 _04043 MPMX20_04044: MPMX20_04044 - N-acetylgalactosamine-6-phosphate deacetylase, at 4,240,834 to 4,241,967 _04044 MPMX20_04045: MPMX20_04045 - Putative D-galactosamine-6-phosphate deaminase AgaS, at 4,242,214 to 4,243,362 _04045 Position (kb) 4240 4241 4242Strain fitness (log2 ratio) -2 -1 0 1 2at 4239.857 kb on + strand, within MPMX20_04042at 4239.884 kb on - strand, within MPMX20_04042at 4239.925 kb on + strand, within MPMX20_04042at 4239.925 kb on + strand, within MPMX20_04042at 4239.930 kb on + strand, within MPMX20_04042at 4239.930 kb on + strand, within MPMX20_04042at 4239.933 kb on - strand, within MPMX20_04042at 4239.963 kb on + strand, within MPMX20_04042at 4239.963 kb on + strand, within MPMX20_04042at 4239.977 kb on - strand, within MPMX20_04042at 4239.977 kb on - strand, within MPMX20_04042at 4239.992 kb on - strand, within MPMX20_04042at 4240.016 kb on - strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.104 kb on - strand, within MPMX20_04042at 4240.122 kb on + strand, within MPMX20_04042at 4240.130 kb on + strand, within MPMX20_04042at 4240.137 kb on + strand, within MPMX20_04042at 4240.181 kb on + strand, within MPMX20_04042at 4240.183 kb on + strand, within MPMX20_04042at 4240.189 kb on - strand, within MPMX20_04042at 4240.189 kb on - strand, within MPMX20_04042at 4240.201 kb on + strand, within MPMX20_04042at 4240.252 kb on + strand, within MPMX20_04042at 4240.276 kb on + strand, within MPMX20_04042at 4240.276 kb on + strand, within MPMX20_04042at 4240.277 kb on + strand, within MPMX20_04042at 4240.278 kb on + strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.285 kb on - strand, within MPMX20_04042at 4240.286 kb on - strand, within MPMX20_04042at 4240.322 kb on - strandat 4240.344 kb on + strandat 4240.344 kb on + strandat 4240.369 kb on + strandat 4240.369 kb on + strandat 4240.397 kb on - strandat 4240.446 kb on + strandat 4240.454 kb on - strand, within MPMX20_04043at 4240.497 kb on - strand, within MPMX20_04043at 4240.521 kb on + strand, within MPMX20_04043at 4240.536 kb on + strand, within MPMX20_04043at 4240.616 kb on - strand, within MPMX20_04043at 4240.629 kb on + strand, within MPMX20_04043at 4240.672 kb on - strand, within MPMX20_04043at 4240.674 kb on + strand, within MPMX20_04043at 4240.813 kb on - strandat 4240.846 kb on - strandat 4240.868 kb on - strandat 4240.883 kb on - strandat 4240.971 kb on + strand, within MPMX20_04044at 4240.971 kb on + strand, within MPMX20_04044at 4240.971 kb on + strand, within MPMX20_04044at 4240.979 kb on - strand, within MPMX20_04044at 4240.998 kb on + strand, within MPMX20_04044at 4241.017 kb on - strand, within MPMX20_04044at 4241.036 kb on + strand, within MPMX20_04044at 4241.044 kb on + strand, within MPMX20_04044at 4241.044 kb on - strand, within MPMX20_04044at 4241.116 kb on + strand, within MPMX20_04044at 4241.118 kb on + strand, within MPMX20_04044at 4241.118 kb on + strand, within MPMX20_04044at 4241.118 kb on + strand, within MPMX20_04044at 4241.118 kb on + strand, within MPMX20_04044at 4241.126 kb on - strand, within MPMX20_04044at 4241.126 kb on - strand, within MPMX20_04044at 4241.128 kb on + strand, within MPMX20_04044at 4241.152 kb on + strand, within MPMX20_04044at 4241.152 kb on + strand, within MPMX20_04044at 4241.188 kb on + strand, within MPMX20_04044at 4241.201 kb on + strand, within MPMX20_04044at 4241.229 kb on + strand, within MPMX20_04044at 4241.229 kb on + strand, within MPMX20_04044at 4241.237 kb on - strand, within MPMX20_04044at 4241.258 kb on + strand, within MPMX20_04044at 4241.264 kb on + strand, within MPMX20_04044at 4241.310 kb on - strand, within MPMX20_04044at 4241.312 kb on + strand, within MPMX20_04044at 4241.312 kb on + strand, within MPMX20_04044at 4241.312 kb on + strand, within MPMX20_04044at 4241.313 kb on + strand, within MPMX20_04044at 4241.320 kb on - strand, within MPMX20_04044at 4241.320 kb on - strand, within MPMX20_04044at 4241.369 kb on + strand, within MPMX20_04044at 4241.369 kb on + strand, within MPMX20_04044at 4241.369 kb on + strand, within MPMX20_04044at 4241.377 kb on - strand, within MPMX20_04044at 4241.377 kb on - strand, within MPMX20_04044at 4241.377 kb on - strand, within MPMX20_04044at 4241.377 kb on - strand, within MPMX20_04044at 4241.377 kb on - strand, within MPMX20_04044at 4241.489 kb on + strand, within MPMX20_04044at 4241.497 kb on - strand, within MPMX20_04044at 4241.524 kb on + strand, within MPMX20_04044at 4241.524 kb on + strand, within MPMX20_04044at 4241.543 kb on - strand, within MPMX20_04044at 4241.546 kb on + strand, within MPMX20_04044at 4241.609 kb on + strand, within MPMX20_04044at 4241.659 kb on - strand, within MPMX20_04044at 4241.734 kb on - strand, within MPMX20_04044at 4241.762 kb on - strand, within MPMX20_04044at 4241.798 kb on - strand, within MPMX20_04044at 4241.798 kb on - strand, within MPMX20_04044at 4241.817 kb on + strand, within MPMX20_04044at 4241.825 kb on - strand, within MPMX20_04044at 4241.852 kb on + strand, within MPMX20_04044at 4241.910 kb on + strandat 4241.918 kb on - strandat 4241.918 kb on - strandat 4241.918 kb on - strandat 4241.948 kb on - strandat 4241.961 kb on + strandat 4241.961 kb on + strandat 4241.969 kb on - strandat 4242.197 kb on + strandat 4242.199 kb on + strandat 4242.199 kb on + strandat 4242.199 kb on + strandat 4242.204 kb on + strandat 4242.204 kb on + strandat 4242.207 kb on - strandat 4242.207 kb on - strandat 4242.240 kb on + strandat 4242.240 kb on - strandat 4242.267 kb on - strandat 4242.336 kb on - strand, within MPMX20_04045at 4242.509 kb on + strand, within MPMX20_04045at 4242.588 kb on + strand, within MPMX20_04045at 4242.623 kb on + strand, within MPMX20_04045at 4242.623 kb on + strand, within MPMX20_04045at 4242.623 kb on + strand, within MPMX20_04045at 4242.682 kb on - strand, within MPMX20_04045at 4242.692 kb on - strand, within MPMX20_04045at 4242.755 kb on + strand, within MPMX20_04045at 4242.763 kb on - strand, within MPMX20_04045at 4242.771 kb on - strand, within MPMX20_04045at 4242.788 kb on + strand, within MPMX20_04045at 4242.796 kb on - strand, within MPMX20_04045at 4242.826 kb on + strand, within MPMX20_04045at 4242.912 kb on + strand, within MPMX20_04045at 4242.912 kb on + strand, within MPMX20_04045at 4242.917 kb on + strand, within MPMX20_04045at 4242.920 kb on - strand, within MPMX20_04045at 4242.942 kb on - strand, within MPMX20_04045

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C)
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4,239,857 + MPMX20_04042 0.40 -0.7
4,239,884 - MPMX20_04042 0.43 -1.0
4,239,925 + MPMX20_04042 0.47 -0.3
4,239,925 + MPMX20_04042 0.47 -0.9
4,239,930 + MPMX20_04042 0.48 +0.2
4,239,930 + MPMX20_04042 0.48 +0.5
4,239,933 - MPMX20_04042 0.48 -0.5
4,239,963 + MPMX20_04042 0.52 -0.8
4,239,963 + MPMX20_04042 0.52 +0.8
4,239,977 - MPMX20_04042 0.53 +0.4
4,239,977 - MPMX20_04042 0.53 +0.7
4,239,992 - MPMX20_04042 0.55 +0.5
4,240,016 - MPMX20_04042 0.58 +0.4
4,240,018 + MPMX20_04042 0.58 +1.6
4,240,018 + MPMX20_04042 0.58 +1.2
4,240,018 + MPMX20_04042 0.58 -0.0
4,240,018 + MPMX20_04042 0.58 -0.5
4,240,018 + MPMX20_04042 0.58 -0.0
4,240,018 + MPMX20_04042 0.58 +0.7
4,240,018 + MPMX20_04042 0.58 -0.4
4,240,018 + MPMX20_04042 0.58 +0.1
4,240,018 + MPMX20_04042 0.58 +0.1
4,240,018 + MPMX20_04042 0.58 -0.4
4,240,018 + MPMX20_04042 0.58 +0.7
4,240,018 + MPMX20_04042 0.58 +0.8
4,240,018 + MPMX20_04042 0.58 -0.4
4,240,026 - MPMX20_04042 0.59 -0.9
4,240,026 - MPMX20_04042 0.59 +0.1
4,240,026 - MPMX20_04042 0.59 +0.2
4,240,026 - MPMX20_04042 0.59 -1.0
4,240,026 - MPMX20_04042 0.59 -0.7
4,240,026 - MPMX20_04042 0.59 -2.0
4,240,026 - MPMX20_04042 0.59 -0.5
4,240,026 - MPMX20_04042 0.59 +0.4
4,240,026 - MPMX20_04042 0.59 -0.1
4,240,026 - MPMX20_04042 0.59 +0.9
4,240,026 - MPMX20_04042 0.59 -0.5
4,240,026 - MPMX20_04042 0.59 -0.9
4,240,096 + MPMX20_04042 0.67 -1.0
4,240,096 + MPMX20_04042 0.67 -0.9
4,240,096 + MPMX20_04042 0.67 +0.2
4,240,096 + MPMX20_04042 0.67 +1.3
4,240,104 - MPMX20_04042 0.68 -0.3
4,240,122 + MPMX20_04042 0.70 -0.4
4,240,130 + MPMX20_04042 0.71 +0.3
4,240,137 + MPMX20_04042 0.71 +0.1
4,240,181 + MPMX20_04042 0.76 +0.1
4,240,183 + MPMX20_04042 0.77 +0.4
4,240,189 - MPMX20_04042 0.77 +0.1
4,240,189 - MPMX20_04042 0.77 +1.0
4,240,201 + MPMX20_04042 0.79 -0.9
4,240,252 + MPMX20_04042 0.85 -0.3
4,240,276 + MPMX20_04042 0.87 +0.7
4,240,276 + MPMX20_04042 0.87 -0.4
4,240,277 + MPMX20_04042 0.87 +1.5
4,240,278 + MPMX20_04042 0.87 -1.2
4,240,284 - MPMX20_04042 0.88 +0.2
4,240,284 - MPMX20_04042 0.88 +0.2
4,240,284 - MPMX20_04042 0.88 +0.2
4,240,284 - MPMX20_04042 0.88 +0.5
4,240,284 - MPMX20_04042 0.88 +0.4
4,240,284 - MPMX20_04042 0.88 -1.6
4,240,284 - MPMX20_04042 0.88 +0.8
4,240,284 - MPMX20_04042 0.88 +0.0
4,240,285 - MPMX20_04042 0.88 +0.1
4,240,286 - MPMX20_04042 0.88 -0.4
4,240,322 - -0.4
4,240,344 + -0.5
4,240,344 + -0.1
4,240,369 + -0.5
4,240,369 + -1.9
4,240,397 - -0.3
4,240,446 + -0.7
4,240,454 - MPMX20_04043 0.12 +0.6
4,240,497 - MPMX20_04043 0.22 +0.1
4,240,521 + MPMX20_04043 0.27 +1.2
4,240,536 + MPMX20_04043 0.31 -1.2
4,240,616 - MPMX20_04043 0.49 +0.7
4,240,629 + MPMX20_04043 0.52 -0.3
4,240,672 - MPMX20_04043 0.62 -0.9
4,240,674 + MPMX20_04043 0.62 -0.3
4,240,813 - +0.2
4,240,846 - -0.0
4,240,868 - -0.0
4,240,883 - -0.3
4,240,971 + MPMX20_04044 0.12 -0.9
4,240,971 + MPMX20_04044 0.12 -0.8
4,240,971 + MPMX20_04044 0.12 +1.4
4,240,979 - MPMX20_04044 0.13 +1.1
4,240,998 + MPMX20_04044 0.14 +0.7
4,241,017 - MPMX20_04044 0.16 -0.8
4,241,036 + MPMX20_04044 0.18 -0.4
4,241,044 + MPMX20_04044 0.19 +1.6
4,241,044 - MPMX20_04044 0.19 +0.8
4,241,116 + MPMX20_04044 0.25 -0.9
4,241,118 + MPMX20_04044 0.25 -0.4
4,241,118 + MPMX20_04044 0.25 -1.1
4,241,118 + MPMX20_04044 0.25 -1.2
4,241,118 + MPMX20_04044 0.25 -0.1
4,241,126 - MPMX20_04044 0.26 +2.7
4,241,126 - MPMX20_04044 0.26 +0.2
4,241,128 + MPMX20_04044 0.26 +1.3
4,241,152 + MPMX20_04044 0.28 -0.3
4,241,152 + MPMX20_04044 0.28 -0.1
4,241,188 + MPMX20_04044 0.31 -0.4
4,241,201 + MPMX20_04044 0.32 -0.3
4,241,229 + MPMX20_04044 0.35 +1.5
4,241,229 + MPMX20_04044 0.35 +0.9
4,241,237 - MPMX20_04044 0.36 -0.4
4,241,258 + MPMX20_04044 0.37 -0.4
4,241,264 + MPMX20_04044 0.38 +1.6
4,241,310 - MPMX20_04044 0.42 -1.4
4,241,312 + MPMX20_04044 0.42 -2.3
4,241,312 + MPMX20_04044 0.42 -1.3
4,241,312 + MPMX20_04044 0.42 +0.5
4,241,313 + MPMX20_04044 0.42 +0.8
4,241,320 - MPMX20_04044 0.43 +0.6
4,241,320 - MPMX20_04044 0.43 -0.5
4,241,369 + MPMX20_04044 0.47 +0.2
4,241,369 + MPMX20_04044 0.47 +0.1
4,241,369 + MPMX20_04044 0.47 -1.9
4,241,377 - MPMX20_04044 0.48 +1.0
4,241,377 - MPMX20_04044 0.48 -1.5
4,241,377 - MPMX20_04044 0.48 +2.1
4,241,377 - MPMX20_04044 0.48 +0.8
4,241,377 - MPMX20_04044 0.48 +0.1
4,241,489 + MPMX20_04044 0.58 -0.7
4,241,497 - MPMX20_04044 0.58 +0.6
4,241,524 + MPMX20_04044 0.61 +1.7
4,241,524 + MPMX20_04044 0.61 -0.2
4,241,543 - MPMX20_04044 0.63 -0.9
4,241,546 + MPMX20_04044 0.63 -0.7
4,241,609 + MPMX20_04044 0.68 +0.2
4,241,659 - MPMX20_04044 0.73 +0.7
4,241,734 - MPMX20_04044 0.79 +0.7
4,241,762 - MPMX20_04044 0.82 -0.2
4,241,798 - MPMX20_04044 0.85 +0.2
4,241,798 - MPMX20_04044 0.85 -1.2
4,241,817 + MPMX20_04044 0.87 +0.1
4,241,825 - MPMX20_04044 0.87 +0.3
4,241,852 + MPMX20_04044 0.90 -0.3
4,241,910 + -0.7
4,241,918 - +0.8
4,241,918 - +0.3
4,241,918 - -0.9
4,241,948 - -0.1
4,241,961 + -1.5
4,241,961 + +0.9
4,241,969 - -0.7
4,242,197 + -1.8
4,242,199 + -1.3
4,242,199 + -1.5
4,242,199 + +0.3
4,242,204 + -0.7
4,242,204 + -0.6
4,242,207 - +0.4
4,242,207 - -0.2
4,242,240 + +0.2
4,242,240 - -1.2
4,242,267 - -0.4
4,242,336 - MPMX20_04045 0.11 +1.1
4,242,509 + MPMX20_04045 0.26 +2.1
4,242,588 + MPMX20_04045 0.33 +0.4
4,242,623 + MPMX20_04045 0.36 +0.7
4,242,623 + MPMX20_04045 0.36 +0.7
4,242,623 + MPMX20_04045 0.36 +0.2
4,242,682 - MPMX20_04045 0.41 -0.1
4,242,692 - MPMX20_04045 0.42 +0.2
4,242,755 + MPMX20_04045 0.47 +0.7
4,242,763 - MPMX20_04045 0.48 +0.1
4,242,771 - MPMX20_04045 0.48 +1.5
4,242,788 + MPMX20_04045 0.50 -0.8
4,242,796 - MPMX20_04045 0.51 +0.7
4,242,826 + MPMX20_04045 0.53 +0.1
4,242,912 + MPMX20_04045 0.61 -0.2
4,242,912 + MPMX20_04045 0.61 -1.2
4,242,917 + MPMX20_04045 0.61 -1.0
4,242,920 - MPMX20_04045 0.61 -0.5
4,242,942 - MPMX20_04045 0.63 -0.9

Or see this region's nucleotide sequence