Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03314

Experiment: D-Glucosamine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03313 and MPMX20_03314 are separated by 112 nucleotidesMPMX20_03314 and MPMX20_03315 overlap by 11 nucleotidesMPMX20_03315 and MPMX20_03316 overlap by 1 nucleotides MPMX20_03313: MPMX20_03313 - Cysteine synthase B, at 3,481,919 to 3,482,830 _03313 MPMX20_03314: MPMX20_03314 - Sulfate/thiosulfate import ATP-binding protein CysA, at 3,482,943 to 3,484,037 _03314 MPMX20_03315: MPMX20_03315 - Sulfate transport system permease protein CysW, at 3,484,027 to 3,484,902 _03315 MPMX20_03316: MPMX20_03316 - Sulfate transport system permease protein CysT, at 3,484,902 to 3,485,735 _03316 Position (kb) 3482 3483 3484 3485Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3481.944 kb on - strandat 3481.944 kb on - strandat 3481.946 kb on - strandat 3481.954 kb on - strandat 3482.051 kb on - strand, within MPMX20_03313at 3482.823 kb on - strandat 3482.823 kb on - strandat 3483.094 kb on - strand, within MPMX20_03314at 3483.145 kb on + strand, within MPMX20_03314at 3483.208 kb on - strand, within MPMX20_03314at 3483.231 kb on + strand, within MPMX20_03314at 3483.255 kb on - strand, within MPMX20_03314at 3483.309 kb on - strand, within MPMX20_03314at 3483.322 kb on - strand, within MPMX20_03314at 3483.361 kb on + strand, within MPMX20_03314at 3483.361 kb on + strand, within MPMX20_03314at 3483.369 kb on - strand, within MPMX20_03314at 3483.369 kb on - strand, within MPMX20_03314at 3483.369 kb on - strand, within MPMX20_03314at 3483.369 kb on - strand, within MPMX20_03314at 3483.379 kb on - strand, within MPMX20_03314at 3483.394 kb on + strand, within MPMX20_03314at 3483.611 kb on + strand, within MPMX20_03314at 3483.743 kb on + strand, within MPMX20_03314at 3483.842 kb on + strand, within MPMX20_03314at 3483.842 kb on + strand, within MPMX20_03314at 3483.850 kb on - strand, within MPMX20_03314at 3483.873 kb on + strand, within MPMX20_03314at 3483.873 kb on + strand, within MPMX20_03314at 3483.881 kb on - strand, within MPMX20_03314at 3483.994 kb on - strandat 3484.043 kb on + strandat 3484.079 kb on - strandat 3484.084 kb on + strandat 3484.086 kb on + strandat 3484.162 kb on + strand, within MPMX20_03315at 3484.163 kb on + strand, within MPMX20_03315at 3484.181 kb on + strand, within MPMX20_03315at 3484.273 kb on + strand, within MPMX20_03315at 3484.273 kb on + strand, within MPMX20_03315at 3484.281 kb on - strand, within MPMX20_03315at 3484.281 kb on - strand, within MPMX20_03315at 3484.286 kb on + strand, within MPMX20_03315at 3484.286 kb on + strand, within MPMX20_03315at 3484.294 kb on - strand, within MPMX20_03315at 3484.294 kb on - strand, within MPMX20_03315at 3484.294 kb on - strand, within MPMX20_03315at 3484.384 kb on + strand, within MPMX20_03315at 3484.400 kb on + strand, within MPMX20_03315at 3484.493 kb on - strand, within MPMX20_03315at 3484.599 kb on - strand, within MPMX20_03315at 3484.639 kb on + strand, within MPMX20_03315at 3484.748 kb on + strand, within MPMX20_03315at 3484.768 kb on + strand, within MPMX20_03315at 3484.824 kb on + strandat 3484.824 kb on + strandat 3484.832 kb on - strandat 3484.999 kb on - strand, within MPMX20_03316at 3485.029 kb on - strand, within MPMX20_03316

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C)
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3,481,944 - +0.6
3,481,944 - -0.6
3,481,946 - -0.4
3,481,954 - -0.4
3,482,051 - MPMX20_03313 0.14 +2.1
3,482,823 - +0.6
3,482,823 - +1.1
3,483,094 - MPMX20_03314 0.14 +0.9
3,483,145 + MPMX20_03314 0.18 -0.1
3,483,208 - MPMX20_03314 0.24 -0.9
3,483,231 + MPMX20_03314 0.26 -2.1
3,483,255 - MPMX20_03314 0.28 +0.1
3,483,309 - MPMX20_03314 0.33 -1.9
3,483,322 - MPMX20_03314 0.35 -1.8
3,483,361 + MPMX20_03314 0.38 -0.9
3,483,361 + MPMX20_03314 0.38 -0.7
3,483,369 - MPMX20_03314 0.39 -0.3
3,483,369 - MPMX20_03314 0.39 -3.2
3,483,369 - MPMX20_03314 0.39 -1.7
3,483,369 - MPMX20_03314 0.39 +0.1
3,483,379 - MPMX20_03314 0.40 -1.0
3,483,394 + MPMX20_03314 0.41 -0.0
3,483,611 + MPMX20_03314 0.61 -0.7
3,483,743 + MPMX20_03314 0.73 -0.6
3,483,842 + MPMX20_03314 0.82 -0.0
3,483,842 + MPMX20_03314 0.82 +0.3
3,483,850 - MPMX20_03314 0.83 -1.7
3,483,873 + MPMX20_03314 0.85 -0.2
3,483,873 + MPMX20_03314 0.85 -0.4
3,483,881 - MPMX20_03314 0.86 -0.0
3,483,994 - +0.3
3,484,043 + -1.0
3,484,079 - -0.6
3,484,084 + -2.7
3,484,086 + +0.1
3,484,162 + MPMX20_03315 0.15 -0.3
3,484,163 + MPMX20_03315 0.16 -0.1
3,484,181 + MPMX20_03315 0.18 +0.9
3,484,273 + MPMX20_03315 0.28 -0.4
3,484,273 + MPMX20_03315 0.28 -0.4
3,484,281 - MPMX20_03315 0.29 +1.3
3,484,281 - MPMX20_03315 0.29 -2.1
3,484,286 + MPMX20_03315 0.30 +0.2
3,484,286 + MPMX20_03315 0.30 -1.2
3,484,294 - MPMX20_03315 0.30 -0.7
3,484,294 - MPMX20_03315 0.30 -0.8
3,484,294 - MPMX20_03315 0.30 +0.5
3,484,384 + MPMX20_03315 0.41 -0.4
3,484,400 + MPMX20_03315 0.43 +0.6
3,484,493 - MPMX20_03315 0.53 -0.5
3,484,599 - MPMX20_03315 0.65 +1.6
3,484,639 + MPMX20_03315 0.70 -0.6
3,484,748 + MPMX20_03315 0.82 +1.1
3,484,768 + MPMX20_03315 0.85 +1.2
3,484,824 + -0.4
3,484,824 + -0.6
3,484,832 - -1.0
3,484,999 - MPMX20_03316 0.12 +0.8
3,485,029 - MPMX20_03316 0.15 -1.5

Or see this region's nucleotide sequence