Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03313 and MPMX20_03314 are separated by 112 nucleotides MPMX20_03314 and MPMX20_03315 overlap by 11 nucleotides MPMX20_03315 and MPMX20_03316 overlap by 1 nucleotides
MPMX20_03313: MPMX20_03313 - Cysteine synthase B, at 3,481,919 to 3,482,830
_03313
MPMX20_03314: MPMX20_03314 - Sulfate/thiosulfate import ATP-binding protein CysA, at 3,482,943 to 3,484,037
_03314
MPMX20_03315: MPMX20_03315 - Sulfate transport system permease protein CysW, at 3,484,027 to 3,484,902
_03315
MPMX20_03316: MPMX20_03316 - Sulfate transport system permease protein CysT, at 3,484,902 to 3,485,735
_03316
Position (kb)
3482
3483
3484
3485 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3481.944 kb on - strand at 3481.944 kb on - strand at 3481.946 kb on - strand at 3481.954 kb on - strand at 3482.051 kb on - strand, within MPMX20_03313 at 3482.823 kb on - strand at 3482.823 kb on - strand at 3483.094 kb on - strand, within MPMX20_03314 at 3483.145 kb on + strand, within MPMX20_03314 at 3483.208 kb on - strand, within MPMX20_03314 at 3483.231 kb on + strand, within MPMX20_03314 at 3483.255 kb on - strand, within MPMX20_03314 at 3483.309 kb on - strand, within MPMX20_03314 at 3483.322 kb on - strand, within MPMX20_03314 at 3483.361 kb on + strand, within MPMX20_03314 at 3483.361 kb on + strand, within MPMX20_03314 at 3483.369 kb on - strand, within MPMX20_03314 at 3483.369 kb on - strand, within MPMX20_03314 at 3483.369 kb on - strand, within MPMX20_03314 at 3483.369 kb on - strand, within MPMX20_03314 at 3483.379 kb on - strand, within MPMX20_03314 at 3483.394 kb on + strand, within MPMX20_03314 at 3483.611 kb on + strand, within MPMX20_03314 at 3483.743 kb on + strand, within MPMX20_03314 at 3483.842 kb on + strand, within MPMX20_03314 at 3483.842 kb on + strand, within MPMX20_03314 at 3483.850 kb on - strand, within MPMX20_03314 at 3483.873 kb on + strand, within MPMX20_03314 at 3483.873 kb on + strand, within MPMX20_03314 at 3483.881 kb on - strand, within MPMX20_03314 at 3483.994 kb on - strand at 3484.043 kb on + strand at 3484.079 kb on - strand at 3484.084 kb on + strand at 3484.086 kb on + strand at 3484.162 kb on + strand, within MPMX20_03315 at 3484.163 kb on + strand, within MPMX20_03315 at 3484.181 kb on + strand, within MPMX20_03315 at 3484.273 kb on + strand, within MPMX20_03315 at 3484.273 kb on + strand, within MPMX20_03315 at 3484.281 kb on - strand, within MPMX20_03315 at 3484.281 kb on - strand, within MPMX20_03315 at 3484.286 kb on + strand, within MPMX20_03315 at 3484.286 kb on + strand, within MPMX20_03315 at 3484.294 kb on - strand, within MPMX20_03315 at 3484.294 kb on - strand, within MPMX20_03315 at 3484.294 kb on - strand, within MPMX20_03315 at 3484.384 kb on + strand, within MPMX20_03315 at 3484.400 kb on + strand, within MPMX20_03315 at 3484.493 kb on - strand, within MPMX20_03315 at 3484.599 kb on - strand, within MPMX20_03315 at 3484.639 kb on + strand, within MPMX20_03315 at 3484.748 kb on + strand, within MPMX20_03315 at 3484.768 kb on + strand, within MPMX20_03315 at 3484.824 kb on + strand at 3484.824 kb on + strand at 3484.832 kb on - strand at 3484.999 kb on - strand, within MPMX20_03316 at 3485.029 kb on - strand, within MPMX20_03316
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 3,481,944 - +0.6 3,481,944 - -0.6 3,481,946 - -0.4 3,481,954 - -0.4 3,482,051 - MPMX20_03313 0.14 +2.1 3,482,823 - +0.6 3,482,823 - +1.1 3,483,094 - MPMX20_03314 0.14 +0.9 3,483,145 + MPMX20_03314 0.18 -0.1 3,483,208 - MPMX20_03314 0.24 -0.9 3,483,231 + MPMX20_03314 0.26 -2.1 3,483,255 - MPMX20_03314 0.28 +0.1 3,483,309 - MPMX20_03314 0.33 -1.9 3,483,322 - MPMX20_03314 0.35 -1.8 3,483,361 + MPMX20_03314 0.38 -0.9 3,483,361 + MPMX20_03314 0.38 -0.7 3,483,369 - MPMX20_03314 0.39 -0.3 3,483,369 - MPMX20_03314 0.39 -3.2 3,483,369 - MPMX20_03314 0.39 -1.7 3,483,369 - MPMX20_03314 0.39 +0.1 3,483,379 - MPMX20_03314 0.40 -1.0 3,483,394 + MPMX20_03314 0.41 -0.0 3,483,611 + MPMX20_03314 0.61 -0.7 3,483,743 + MPMX20_03314 0.73 -0.6 3,483,842 + MPMX20_03314 0.82 -0.0 3,483,842 + MPMX20_03314 0.82 +0.3 3,483,850 - MPMX20_03314 0.83 -1.7 3,483,873 + MPMX20_03314 0.85 -0.2 3,483,873 + MPMX20_03314 0.85 -0.4 3,483,881 - MPMX20_03314 0.86 -0.0 3,483,994 - +0.3 3,484,043 + -1.0 3,484,079 - -0.6 3,484,084 + -2.7 3,484,086 + +0.1 3,484,162 + MPMX20_03315 0.15 -0.3 3,484,163 + MPMX20_03315 0.16 -0.1 3,484,181 + MPMX20_03315 0.18 +0.9 3,484,273 + MPMX20_03315 0.28 -0.4 3,484,273 + MPMX20_03315 0.28 -0.4 3,484,281 - MPMX20_03315 0.29 +1.3 3,484,281 - MPMX20_03315 0.29 -2.1 3,484,286 + MPMX20_03315 0.30 +0.2 3,484,286 + MPMX20_03315 0.30 -1.2 3,484,294 - MPMX20_03315 0.30 -0.7 3,484,294 - MPMX20_03315 0.30 -0.8 3,484,294 - MPMX20_03315 0.30 +0.5 3,484,384 + MPMX20_03315 0.41 -0.4 3,484,400 + MPMX20_03315 0.43 +0.6 3,484,493 - MPMX20_03315 0.53 -0.5 3,484,599 - MPMX20_03315 0.65 +1.6 3,484,639 + MPMX20_03315 0.70 -0.6 3,484,748 + MPMX20_03315 0.82 +1.1 3,484,768 + MPMX20_03315 0.85 +1.2 3,484,824 + -0.4 3,484,824 + -0.6 3,484,832 - -1.0 3,484,999 - MPMX20_03316 0.12 +0.8 3,485,029 - MPMX20_03316 0.15 -1.5
Or see this region's nucleotide sequence