Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02913

Experiment: D-Glucosamine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02911 and MPMX20_02912 are separated by 82 nucleotidesMPMX20_02912 and MPMX20_02913 are separated by 40 nucleotidesMPMX20_02913 and MPMX20_02914 are separated by 117 nucleotidesMPMX20_02914 and MPMX20_02915 are separated by 73 nucleotides MPMX20_02911: MPMX20_02911 - hypothetical protein, at 3,051,299 to 3,052,153 _02911 MPMX20_02912: MPMX20_02912 - hypothetical protein, at 3,052,236 to 3,052,457 _02912 MPMX20_02913: MPMX20_02913 - hypothetical protein, at 3,052,498 to 3,052,719 _02913 MPMX20_02914: MPMX20_02914 - HTH-type transcriptional regulator PrtR, at 3,052,837 to 3,053,547 _02914 MPMX20_02915: MPMX20_02915 - hypothetical protein, at 3,053,621 to 3,054,001 _02915 Position (kb) 3052 3053Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3051.502 kb on + strand, within MPMX20_02911at 3051.502 kb on + strand, within MPMX20_02911at 3051.502 kb on + strand, within MPMX20_02911at 3051.510 kb on - strand, within MPMX20_02911at 3051.510 kb on - strand, within MPMX20_02911at 3051.510 kb on - strand, within MPMX20_02911at 3051.510 kb on - strand, within MPMX20_02911at 3051.510 kb on - strand, within MPMX20_02911at 3051.514 kb on + strand, within MPMX20_02911at 3051.514 kb on + strand, within MPMX20_02911at 3051.514 kb on + strand, within MPMX20_02911at 3051.514 kb on + strand, within MPMX20_02911at 3051.514 kb on + strand, within MPMX20_02911at 3051.522 kb on - strand, within MPMX20_02911at 3051.522 kb on - strand, within MPMX20_02911at 3051.522 kb on - strand, within MPMX20_02911at 3051.527 kb on - strand, within MPMX20_02911at 3051.555 kb on + strand, within MPMX20_02911at 3051.571 kb on - strand, within MPMX20_02911at 3051.571 kb on - strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.595 kb on + strand, within MPMX20_02911at 3051.596 kb on + strand, within MPMX20_02911at 3051.596 kb on + strand, within MPMX20_02911at 3051.596 kb on + strand, within MPMX20_02911at 3051.596 kb on + strand, within MPMX20_02911at 3051.596 kb on + strand, within MPMX20_02911at 3051.596 kb on + strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.603 kb on - strand, within MPMX20_02911at 3051.604 kb on - strand, within MPMX20_02911at 3051.604 kb on - strand, within MPMX20_02911at 3051.604 kb on - strand, within MPMX20_02911at 3051.604 kb on - strand, within MPMX20_02911at 3051.608 kb on - strand, within MPMX20_02911at 3051.609 kb on + strand, within MPMX20_02911at 3051.624 kb on + strand, within MPMX20_02911at 3051.710 kb on + strand, within MPMX20_02911at 3051.718 kb on - strand, within MPMX20_02911at 3051.734 kb on + strand, within MPMX20_02911at 3051.742 kb on - strand, within MPMX20_02911at 3051.742 kb on - strand, within MPMX20_02911at 3051.762 kb on - strand, within MPMX20_02911at 3051.867 kb on + strand, within MPMX20_02911at 3051.882 kb on + strand, within MPMX20_02911at 3051.890 kb on - strand, within MPMX20_02911at 3051.907 kb on + strand, within MPMX20_02911at 3051.912 kb on + strand, within MPMX20_02911at 3051.912 kb on + strand, within MPMX20_02911at 3051.917 kb on + strand, within MPMX20_02911at 3051.917 kb on + strand, within MPMX20_02911at 3051.920 kb on - strand, within MPMX20_02911at 3051.922 kb on + strand, within MPMX20_02911at 3051.925 kb on - strand, within MPMX20_02911at 3051.925 kb on - strand, within MPMX20_02911at 3051.932 kb on - strand, within MPMX20_02911at 3051.938 kb on - strand, within MPMX20_02911at 3051.947 kb on - strand, within MPMX20_02911at 3051.983 kb on + strand, within MPMX20_02911at 3051.990 kb on + strand, within MPMX20_02911at 3051.991 kb on - strand, within MPMX20_02911at 3052.038 kb on - strand, within MPMX20_02911at 3052.040 kb on + strand, within MPMX20_02911at 3052.099 kb on + strandat 3052.105 kb on - strandat 3052.107 kb on - strandat 3052.111 kb on + strandat 3052.112 kb on + strandat 3052.217 kb on + strandat 3052.253 kb on + strandat 3052.321 kb on + strand, within MPMX20_02912at 3052.474 kb on + strandat 3052.518 kb on + strandat 3052.519 kb on + strandat 3052.620 kb on + strand, within MPMX20_02913at 3052.647 kb on + strand, within MPMX20_02913at 3052.650 kb on + strand, within MPMX20_02913at 3052.818 kb on + strandat 3052.818 kb on + strandat 3053.591 kb on - strandat 3053.652 kb on - strandat 3053.652 kb on - strandat 3053.666 kb on - strand, within MPMX20_02915at 3053.668 kb on - strand, within MPMX20_02915at 3053.705 kb on + strand, within MPMX20_02915

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C)
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3,051,502 + MPMX20_02911 0.24 -0.8
3,051,502 + MPMX20_02911 0.24 -0.1
3,051,502 + MPMX20_02911 0.24 +0.5
3,051,510 - MPMX20_02911 0.25 +0.9
3,051,510 - MPMX20_02911 0.25 +0.8
3,051,510 - MPMX20_02911 0.25 -0.1
3,051,510 - MPMX20_02911 0.25 -0.7
3,051,510 - MPMX20_02911 0.25 -0.6
3,051,514 + MPMX20_02911 0.25 -0.8
3,051,514 + MPMX20_02911 0.25 +0.5
3,051,514 + MPMX20_02911 0.25 +1.1
3,051,514 + MPMX20_02911 0.25 +0.7
3,051,514 + MPMX20_02911 0.25 -1.1
3,051,522 - MPMX20_02911 0.26 -0.3
3,051,522 - MPMX20_02911 0.26 -0.2
3,051,522 - MPMX20_02911 0.26 -0.1
3,051,527 - MPMX20_02911 0.27 +0.9
3,051,555 + MPMX20_02911 0.30 +0.3
3,051,571 - MPMX20_02911 0.32 -1.3
3,051,571 - MPMX20_02911 0.32 -1.5
3,051,595 + MPMX20_02911 0.35 -1.4
3,051,595 + MPMX20_02911 0.35 -0.1
3,051,595 + MPMX20_02911 0.35 -0.7
3,051,595 + MPMX20_02911 0.35 +0.9
3,051,595 + MPMX20_02911 0.35 -0.4
3,051,595 + MPMX20_02911 0.35 +0.3
3,051,595 + MPMX20_02911 0.35 +1.0
3,051,595 + MPMX20_02911 0.35 -0.9
3,051,595 + MPMX20_02911 0.35 -2.5
3,051,595 + MPMX20_02911 0.35 -0.3
3,051,595 + MPMX20_02911 0.35 +0.9
3,051,595 + MPMX20_02911 0.35 -0.0
3,051,595 + MPMX20_02911 0.35 -1.7
3,051,595 + MPMX20_02911 0.35 -0.6
3,051,595 + MPMX20_02911 0.35 +0.2
3,051,595 + MPMX20_02911 0.35 -1.6
3,051,595 + MPMX20_02911 0.35 -0.1
3,051,595 + MPMX20_02911 0.35 +0.0
3,051,595 + MPMX20_02911 0.35 -1.3
3,051,595 + MPMX20_02911 0.35 -0.4
3,051,595 + MPMX20_02911 0.35 +0.2
3,051,595 + MPMX20_02911 0.35 -1.0
3,051,595 + MPMX20_02911 0.35 -0.1
3,051,595 + MPMX20_02911 0.35 +0.2
3,051,595 + MPMX20_02911 0.35 +0.8
3,051,595 + MPMX20_02911 0.35 +0.2
3,051,595 + MPMX20_02911 0.35 -1.1
3,051,595 + MPMX20_02911 0.35 +0.6
3,051,595 + MPMX20_02911 0.35 +1.1
3,051,595 + MPMX20_02911 0.35 +0.9
3,051,595 + MPMX20_02911 0.35 +0.5
3,051,595 + MPMX20_02911 0.35 +0.7
3,051,595 + MPMX20_02911 0.35 +0.3
3,051,595 + MPMX20_02911 0.35 -0.1
3,051,595 + MPMX20_02911 0.35 +0.2
3,051,595 + MPMX20_02911 0.35 -0.1
3,051,595 + MPMX20_02911 0.35 -0.5
3,051,595 + MPMX20_02911 0.35 +1.1
3,051,596 + MPMX20_02911 0.35 -0.2
3,051,596 + MPMX20_02911 0.35 -0.8
3,051,596 + MPMX20_02911 0.35 +0.9
3,051,596 + MPMX20_02911 0.35 -0.9
3,051,596 + MPMX20_02911 0.35 +0.1
3,051,596 + MPMX20_02911 0.35 -0.1
3,051,603 - MPMX20_02911 0.36 -1.1
3,051,603 - MPMX20_02911 0.36 +1.2
3,051,603 - MPMX20_02911 0.36 +1.4
3,051,603 - MPMX20_02911 0.36 +1.7
3,051,603 - MPMX20_02911 0.36 -0.0
3,051,603 - MPMX20_02911 0.36 -0.1
3,051,603 - MPMX20_02911 0.36 -0.1
3,051,603 - MPMX20_02911 0.36 +0.8
3,051,603 - MPMX20_02911 0.36 +0.9
3,051,603 - MPMX20_02911 0.36 +0.7
3,051,603 - MPMX20_02911 0.36 +0.3
3,051,603 - MPMX20_02911 0.36 -1.5
3,051,603 - MPMX20_02911 0.36 +3.5
3,051,603 - MPMX20_02911 0.36 -1.4
3,051,603 - MPMX20_02911 0.36 -0.3
3,051,603 - MPMX20_02911 0.36 +1.8
3,051,603 - MPMX20_02911 0.36 +0.3
3,051,604 - MPMX20_02911 0.36 -0.1
3,051,604 - MPMX20_02911 0.36 +0.6
3,051,604 - MPMX20_02911 0.36 -0.2
3,051,604 - MPMX20_02911 0.36 -1.8
3,051,608 - MPMX20_02911 0.36 +0.1
3,051,609 + MPMX20_02911 0.36 +1.3
3,051,624 + MPMX20_02911 0.38 -0.7
3,051,710 + MPMX20_02911 0.48 -1.2
3,051,718 - MPMX20_02911 0.49 -2.4
3,051,734 + MPMX20_02911 0.51 -0.4
3,051,742 - MPMX20_02911 0.52 -0.6
3,051,742 - MPMX20_02911 0.52 +0.4
3,051,762 - MPMX20_02911 0.54 +0.2
3,051,867 + MPMX20_02911 0.66 +1.3
3,051,882 + MPMX20_02911 0.68 +0.2
3,051,890 - MPMX20_02911 0.69 -0.1
3,051,907 + MPMX20_02911 0.71 -0.6
3,051,912 + MPMX20_02911 0.72 -1.3
3,051,912 + MPMX20_02911 0.72 +0.5
3,051,917 + MPMX20_02911 0.72 -0.1
3,051,917 + MPMX20_02911 0.72 -0.5
3,051,920 - MPMX20_02911 0.73 -1.0
3,051,922 + MPMX20_02911 0.73 -2.1
3,051,925 - MPMX20_02911 0.73 +0.5
3,051,925 - MPMX20_02911 0.73 +0.3
3,051,932 - MPMX20_02911 0.74 +0.5
3,051,938 - MPMX20_02911 0.75 +0.0
3,051,947 - MPMX20_02911 0.76 +1.7
3,051,983 + MPMX20_02911 0.80 -0.3
3,051,990 + MPMX20_02911 0.81 +0.8
3,051,991 - MPMX20_02911 0.81 -0.2
3,052,038 - MPMX20_02911 0.86 +0.4
3,052,040 + MPMX20_02911 0.87 +0.8
3,052,099 + -0.5
3,052,105 - -0.8
3,052,107 - +1.1
3,052,111 + +0.1
3,052,112 + -1.3
3,052,217 + -0.1
3,052,253 + +0.3
3,052,321 + MPMX20_02912 0.38 +1.5
3,052,474 + +0.0
3,052,518 + +0.3
3,052,519 + +1.4
3,052,620 + MPMX20_02913 0.55 -1.5
3,052,647 + MPMX20_02913 0.67 -1.8
3,052,650 + MPMX20_02913 0.68 +0.9
3,052,818 + +1.0
3,052,818 + +1.0
3,053,591 - +1.1
3,053,652 - -1.6
3,053,652 - +0.5
3,053,666 - MPMX20_02915 0.12 -0.7
3,053,668 - MPMX20_02915 0.12 +1.5
3,053,705 + MPMX20_02915 0.22 +0.3

Or see this region's nucleotide sequence