Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01327

Experiment: D-Glucosamine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01326 and MPMX20_01327 are separated by 446 nucleotidesMPMX20_01327 and MPMX20_01328 are separated by 44 nucleotidesMPMX20_01328 and MPMX20_01329 are separated by 108 nucleotides MPMX20_01326: MPMX20_01326 - Glutamine--tRNA ligase, at 1,384,486 to 1,386,153 _01326 MPMX20_01327: MPMX20_01327 - Chitoporin, at 1,386,600 to 1,387,997 _01327 MPMX20_01328: MPMX20_01328 - putative lipoprotein ChiQ, at 1,388,042 to 1,388,374 _01328 MPMX20_01329: MPMX20_01329 - Ferric uptake regulation protein, at 1,388,483 to 1,388,929 _01329 Position (kb) 1386 1387 1388Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1386.123 kb on + strandat 1386.151 kb on + strandat 1386.156 kb on + strandat 1386.161 kb on + strandat 1386.161 kb on + strandat 1386.166 kb on + strandat 1386.166 kb on + strandat 1386.166 kb on + strandat 1386.166 kb on + strandat 1386.166 kb on + strandat 1386.169 kb on - strandat 1386.182 kb on + strandat 1386.254 kb on + strandat 1386.254 kb on + strandat 1386.254 kb on + strandat 1386.254 kb on + strandat 1386.256 kb on + strandat 1386.256 kb on + strandat 1386.262 kb on - strandat 1386.262 kb on - strandat 1386.264 kb on - strandat 1386.264 kb on - strandat 1386.266 kb on + strandat 1386.528 kb on - strandat 1386.547 kb on - strandat 1386.564 kb on + strandat 1386.564 kb on + strandat 1386.572 kb on - strandat 1386.590 kb on + strandat 1386.598 kb on - strandat 1386.598 kb on - strandat 1386.598 kb on - strandat 1386.598 kb on - strandat 1386.598 kb on - strandat 1386.598 kb on - strandat 1386.621 kb on - strandat 1386.623 kb on - strandat 1386.623 kb on - strandat 1386.630 kb on - strandat 1386.632 kb on + strandat 1386.637 kb on - strandat 1386.638 kb on + strandat 1386.638 kb on + strandat 1386.639 kb on + strandat 1386.640 kb on - strandat 1386.640 kb on - strandat 1386.640 kb on - strandat 1386.646 kb on - strandat 1386.646 kb on - strandat 1386.646 kb on - strandat 1386.646 kb on - strandat 1386.646 kb on - strandat 1386.661 kb on + strandat 1386.666 kb on + strandat 1386.669 kb on - strandat 1386.686 kb on + strandat 1386.686 kb on + strandat 1386.686 kb on + strandat 1386.686 kb on + strandat 1386.686 kb on + strandat 1386.686 kb on + strandat 1386.686 kb on + strandat 1386.692 kb on + strandat 1386.694 kb on - strandat 1386.694 kb on - strandat 1386.694 kb on - strandat 1386.694 kb on - strandat 1386.694 kb on - strandat 1386.694 kb on - strandat 1386.694 kb on - strandat 1386.699 kb on + strandat 1386.720 kb on - strandat 1386.730 kb on + strandat 1386.730 kb on + strandat 1386.738 kb on - strandat 1386.746 kb on + strand, within MPMX20_01327at 1386.746 kb on + strand, within MPMX20_01327at 1386.746 kb on + strand, within MPMX20_01327at 1386.746 kb on + strand, within MPMX20_01327at 1386.746 kb on + strand, within MPMX20_01327at 1386.754 kb on - strand, within MPMX20_01327at 1386.760 kb on + strand, within MPMX20_01327at 1386.766 kb on + strand, within MPMX20_01327at 1386.797 kb on + strand, within MPMX20_01327at 1386.801 kb on + strand, within MPMX20_01327at 1386.801 kb on + strand, within MPMX20_01327at 1386.805 kb on - strand, within MPMX20_01327at 1386.807 kb on + strand, within MPMX20_01327at 1386.815 kb on + strand, within MPMX20_01327at 1386.815 kb on - strand, within MPMX20_01327at 1386.815 kb on - strand, within MPMX20_01327at 1386.829 kb on - strand, within MPMX20_01327at 1386.836 kb on + strand, within MPMX20_01327at 1386.837 kb on + strand, within MPMX20_01327at 1386.837 kb on + strand, within MPMX20_01327at 1386.837 kb on + strand, within MPMX20_01327at 1386.845 kb on - strand, within MPMX20_01327at 1386.859 kb on + strand, within MPMX20_01327at 1386.859 kb on + strand, within MPMX20_01327at 1386.871 kb on - strand, within MPMX20_01327at 1386.910 kb on + strand, within MPMX20_01327at 1386.915 kb on + strand, within MPMX20_01327at 1386.943 kb on + strand, within MPMX20_01327at 1386.985 kb on + strand, within MPMX20_01327at 1386.985 kb on + strand, within MPMX20_01327at 1386.993 kb on - strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1386.995 kb on + strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.003 kb on - strand, within MPMX20_01327at 1387.029 kb on + strand, within MPMX20_01327at 1387.045 kb on + strand, within MPMX20_01327at 1387.063 kb on + strand, within MPMX20_01327at 1387.070 kb on - strand, within MPMX20_01327at 1387.071 kb on - strand, within MPMX20_01327at 1387.071 kb on - strand, within MPMX20_01327at 1387.071 kb on - strand, within MPMX20_01327at 1387.090 kb on - strand, within MPMX20_01327at 1387.093 kb on - strand, within MPMX20_01327at 1387.097 kb on + strand, within MPMX20_01327at 1387.102 kb on + strand, within MPMX20_01327at 1387.102 kb on + strand, within MPMX20_01327at 1387.105 kb on - strand, within MPMX20_01327at 1387.105 kb on - strand, within MPMX20_01327at 1387.105 kb on - strand, within MPMX20_01327at 1387.110 kb on - strand, within MPMX20_01327at 1387.110 kb on - strand, within MPMX20_01327at 1387.132 kb on + strand, within MPMX20_01327at 1387.139 kb on - strand, within MPMX20_01327at 1387.141 kb on + strand, within MPMX20_01327at 1387.149 kb on - strand, within MPMX20_01327at 1387.172 kb on + strand, within MPMX20_01327at 1387.181 kb on - strand, within MPMX20_01327at 1387.194 kb on + strand, within MPMX20_01327at 1387.195 kb on - strand, within MPMX20_01327at 1387.205 kb on - strand, within MPMX20_01327at 1387.219 kb on + strand, within MPMX20_01327at 1387.227 kb on - strand, within MPMX20_01327at 1387.227 kb on - strand, within MPMX20_01327at 1387.246 kb on + strand, within MPMX20_01327at 1387.250 kb on + strand, within MPMX20_01327at 1387.258 kb on - strand, within MPMX20_01327at 1387.259 kb on - strand, within MPMX20_01327at 1387.263 kb on - strand, within MPMX20_01327at 1387.299 kb on + strand, within MPMX20_01327at 1387.312 kb on + strand, within MPMX20_01327at 1387.320 kb on - strand, within MPMX20_01327at 1387.322 kb on + strand, within MPMX20_01327at 1387.322 kb on + strand, within MPMX20_01327at 1387.322 kb on + strand, within MPMX20_01327at 1387.329 kb on + strand, within MPMX20_01327at 1387.330 kb on - strand, within MPMX20_01327at 1387.330 kb on - strand, within MPMX20_01327at 1387.330 kb on - strand, within MPMX20_01327at 1387.330 kb on - strand, within MPMX20_01327at 1387.330 kb on - strand, within MPMX20_01327at 1387.330 kb on - strand, within MPMX20_01327at 1387.336 kb on - strand, within MPMX20_01327at 1387.396 kb on + strand, within MPMX20_01327at 1387.406 kb on + strand, within MPMX20_01327at 1387.414 kb on - strand, within MPMX20_01327at 1387.414 kb on - strand, within MPMX20_01327at 1387.536 kb on - strand, within MPMX20_01327at 1387.548 kb on + strand, within MPMX20_01327at 1387.566 kb on - strand, within MPMX20_01327at 1387.638 kb on - strand, within MPMX20_01327at 1387.638 kb on - strand, within MPMX20_01327at 1387.768 kb on - strand, within MPMX20_01327at 1387.776 kb on - strand, within MPMX20_01327at 1387.808 kb on + strand, within MPMX20_01327at 1387.844 kb on + strand, within MPMX20_01327at 1387.844 kb on + strand, within MPMX20_01327at 1387.852 kb on - strand, within MPMX20_01327at 1387.868 kb on + strandat 1387.948 kb on - strandat 1387.991 kb on + strandat 1388.094 kb on + strand, within MPMX20_01328at 1388.160 kb on - strand, within MPMX20_01328at 1388.160 kb on - strand, within MPMX20_01328at 1388.162 kb on + strand, within MPMX20_01328at 1388.162 kb on + strand, within MPMX20_01328at 1388.283 kb on + strand, within MPMX20_01328at 1388.283 kb on + strand, within MPMX20_01328at 1388.283 kb on + strand, within MPMX20_01328at 1388.291 kb on - strand, within MPMX20_01328at 1388.336 kb on - strand, within MPMX20_01328at 1388.402 kb on + strandat 1388.460 kb on + strandat 1388.545 kb on + strand, within MPMX20_01329at 1388.654 kb on + strand, within MPMX20_01329at 1388.654 kb on + strand, within MPMX20_01329at 1388.895 kb on - strandat 1388.906 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C)
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1,386,123 + +4.0
1,386,151 + +1.1
1,386,156 + +0.7
1,386,161 + +0.7
1,386,161 + -1.8
1,386,166 + -0.4
1,386,166 + +0.5
1,386,166 + -0.0
1,386,166 + -0.6
1,386,166 + -0.2
1,386,169 - +0.5
1,386,182 + +0.3
1,386,254 + -1.3
1,386,254 + -0.6
1,386,254 + +0.6
1,386,254 + -2.0
1,386,256 + +0.7
1,386,256 + -2.3
1,386,262 - +0.2
1,386,262 - +2.0
1,386,264 - +0.3
1,386,264 - -0.5
1,386,266 + +1.7
1,386,528 - +0.1
1,386,547 - +0.7
1,386,564 + -0.5
1,386,564 + -0.5
1,386,572 - -0.7
1,386,590 + -0.1
1,386,598 - -0.6
1,386,598 - +0.4
1,386,598 - -0.2
1,386,598 - -0.1
1,386,598 - +0.7
1,386,598 - -1.6
1,386,621 - +0.2
1,386,623 - +2.7
1,386,623 - -0.2
1,386,630 - +0.4
1,386,632 + +0.8
1,386,637 - +1.2
1,386,638 + -0.1
1,386,638 + +0.1
1,386,639 + -0.2
1,386,640 - +2.5
1,386,640 - +1.3
1,386,640 - -1.9
1,386,646 - +0.3
1,386,646 - -1.0
1,386,646 - +0.2
1,386,646 - +0.6
1,386,646 - -0.6
1,386,661 + -0.8
1,386,666 + +0.9
1,386,669 - -0.0
1,386,686 + -0.9
1,386,686 + -0.6
1,386,686 + +0.6
1,386,686 + -1.0
1,386,686 + -1.6
1,386,686 + -0.9
1,386,686 + -0.6
1,386,692 + +1.5
1,386,694 - +0.5
1,386,694 - -0.3
1,386,694 - +1.1
1,386,694 - +0.7
1,386,694 - +1.0
1,386,694 - +0.7
1,386,694 - +0.7
1,386,699 + -1.0
1,386,720 - +0.7
1,386,730 + -0.5
1,386,730 + -0.8
1,386,738 - -0.2
1,386,746 + MPMX20_01327 0.10 +2.0
1,386,746 + MPMX20_01327 0.10 +1.0
1,386,746 + MPMX20_01327 0.10 +0.4
1,386,746 + MPMX20_01327 0.10 -0.6
1,386,746 + MPMX20_01327 0.10 +2.0
1,386,754 - MPMX20_01327 0.11 -0.0
1,386,760 + MPMX20_01327 0.11 +1.2
1,386,766 + MPMX20_01327 0.12 -0.3
1,386,797 + MPMX20_01327 0.14 -0.2
1,386,801 + MPMX20_01327 0.14 -0.2
1,386,801 + MPMX20_01327 0.14 +1.7
1,386,805 - MPMX20_01327 0.15 -1.3
1,386,807 + MPMX20_01327 0.15 +0.1
1,386,815 + MPMX20_01327 0.15 +0.5
1,386,815 - MPMX20_01327 0.15 -0.4
1,386,815 - MPMX20_01327 0.15 -0.2
1,386,829 - MPMX20_01327 0.16 -0.2
1,386,836 + MPMX20_01327 0.17 -0.3
1,386,837 + MPMX20_01327 0.17 +1.9
1,386,837 + MPMX20_01327 0.17 -0.2
1,386,837 + MPMX20_01327 0.17 +0.9
1,386,845 - MPMX20_01327 0.18 -0.8
1,386,859 + MPMX20_01327 0.19 -0.0
1,386,859 + MPMX20_01327 0.19 +0.4
1,386,871 - MPMX20_01327 0.19 +2.0
1,386,910 + MPMX20_01327 0.22 +0.4
1,386,915 + MPMX20_01327 0.23 -0.0
1,386,943 + MPMX20_01327 0.25 -1.1
1,386,985 + MPMX20_01327 0.28 -0.4
1,386,985 + MPMX20_01327 0.28 -1.0
1,386,993 - MPMX20_01327 0.28 +0.1
1,386,995 + MPMX20_01327 0.28 -0.6
1,386,995 + MPMX20_01327 0.28 +0.6
1,386,995 + MPMX20_01327 0.28 -1.4
1,386,995 + MPMX20_01327 0.28 +1.4
1,386,995 + MPMX20_01327 0.28 -0.2
1,386,995 + MPMX20_01327 0.28 +0.0
1,386,995 + MPMX20_01327 0.28 -0.4
1,386,995 + MPMX20_01327 0.28 +0.3
1,387,003 - MPMX20_01327 0.29 -1.5
1,387,003 - MPMX20_01327 0.29 +0.3
1,387,003 - MPMX20_01327 0.29 +0.5
1,387,003 - MPMX20_01327 0.29 -0.6
1,387,003 - MPMX20_01327 0.29 -0.8
1,387,003 - MPMX20_01327 0.29 +0.4
1,387,003 - MPMX20_01327 0.29 -0.5
1,387,003 - MPMX20_01327 0.29 +0.4
1,387,029 + MPMX20_01327 0.31 -0.3
1,387,045 + MPMX20_01327 0.32 -0.8
1,387,063 + MPMX20_01327 0.33 -2.8
1,387,070 - MPMX20_01327 0.34 +2.0
1,387,071 - MPMX20_01327 0.34 +2.9
1,387,071 - MPMX20_01327 0.34 -0.1
1,387,071 - MPMX20_01327 0.34 -0.7
1,387,090 - MPMX20_01327 0.35 -0.6
1,387,093 - MPMX20_01327 0.35 +1.5
1,387,097 + MPMX20_01327 0.36 +0.4
1,387,102 + MPMX20_01327 0.36 -0.1
1,387,102 + MPMX20_01327 0.36 -1.4
1,387,105 - MPMX20_01327 0.36 +0.2
1,387,105 - MPMX20_01327 0.36 +0.3
1,387,105 - MPMX20_01327 0.36 -0.9
1,387,110 - MPMX20_01327 0.36 -1.3
1,387,110 - MPMX20_01327 0.36 +0.6
1,387,132 + MPMX20_01327 0.38 +0.9
1,387,139 - MPMX20_01327 0.39 +0.4
1,387,141 + MPMX20_01327 0.39 -0.1
1,387,149 - MPMX20_01327 0.39 -0.2
1,387,172 + MPMX20_01327 0.41 +0.2
1,387,181 - MPMX20_01327 0.42 +0.0
1,387,194 + MPMX20_01327 0.42 +2.0
1,387,195 - MPMX20_01327 0.43 +0.1
1,387,205 - MPMX20_01327 0.43 +1.0
1,387,219 + MPMX20_01327 0.44 +0.5
1,387,227 - MPMX20_01327 0.45 +0.5
1,387,227 - MPMX20_01327 0.45 -0.6
1,387,246 + MPMX20_01327 0.46 +0.8
1,387,250 + MPMX20_01327 0.46 -1.4
1,387,258 - MPMX20_01327 0.47 +0.2
1,387,259 - MPMX20_01327 0.47 -0.2
1,387,263 - MPMX20_01327 0.47 -0.0
1,387,299 + MPMX20_01327 0.50 +0.2
1,387,312 + MPMX20_01327 0.51 -0.8
1,387,320 - MPMX20_01327 0.52 -0.8
1,387,322 + MPMX20_01327 0.52 +0.9
1,387,322 + MPMX20_01327 0.52 -0.2
1,387,322 + MPMX20_01327 0.52 -0.5
1,387,329 + MPMX20_01327 0.52 +0.2
1,387,330 - MPMX20_01327 0.52 -0.1
1,387,330 - MPMX20_01327 0.52 +1.1
1,387,330 - MPMX20_01327 0.52 -0.0
1,387,330 - MPMX20_01327 0.52 +0.2
1,387,330 - MPMX20_01327 0.52 +0.4
1,387,330 - MPMX20_01327 0.52 +0.0
1,387,336 - MPMX20_01327 0.53 +0.6
1,387,396 + MPMX20_01327 0.57 +1.1
1,387,406 + MPMX20_01327 0.58 -1.6
1,387,414 - MPMX20_01327 0.58 -0.3
1,387,414 - MPMX20_01327 0.58 +1.1
1,387,536 - MPMX20_01327 0.67 +0.7
1,387,548 + MPMX20_01327 0.68 -1.2
1,387,566 - MPMX20_01327 0.69 +1.0
1,387,638 - MPMX20_01327 0.74 +0.7
1,387,638 - MPMX20_01327 0.74 -1.3
1,387,768 - MPMX20_01327 0.84 +0.6
1,387,776 - MPMX20_01327 0.84 -0.2
1,387,808 + MPMX20_01327 0.86 -0.4
1,387,844 + MPMX20_01327 0.89 +0.9
1,387,844 + MPMX20_01327 0.89 +1.4
1,387,852 - MPMX20_01327 0.90 -1.1
1,387,868 + -0.6
1,387,948 - -1.0
1,387,991 + +1.5
1,388,094 + MPMX20_01328 0.16 -0.5
1,388,160 - MPMX20_01328 0.35 -1.7
1,388,160 - MPMX20_01328 0.35 +0.8
1,388,162 + MPMX20_01328 0.36 +0.6
1,388,162 + MPMX20_01328 0.36 +0.8
1,388,283 + MPMX20_01328 0.72 +0.1
1,388,283 + MPMX20_01328 0.72 -1.1
1,388,283 + MPMX20_01328 0.72 +0.3
1,388,291 - MPMX20_01328 0.75 -1.2
1,388,336 - MPMX20_01328 0.88 +0.2
1,388,402 + -1.8
1,388,460 + -2.9
1,388,545 + MPMX20_01329 0.14 -0.3
1,388,654 + MPMX20_01329 0.38 -1.1
1,388,654 + MPMX20_01329 0.38 -1.3
1,388,895 - -1.1
1,388,906 - -0.6

Or see this region's nucleotide sequence