Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01326 and MPMX20_01327 are separated by 446 nucleotides MPMX20_01327 and MPMX20_01328 are separated by 44 nucleotides MPMX20_01328 and MPMX20_01329 are separated by 108 nucleotides
MPMX20_01326: MPMX20_01326 - Glutamine--tRNA ligase, at 1,384,486 to 1,386,153
_01326
MPMX20_01327: MPMX20_01327 - Chitoporin, at 1,386,600 to 1,387,997
_01327
MPMX20_01328: MPMX20_01328 - putative lipoprotein ChiQ, at 1,388,042 to 1,388,374
_01328
MPMX20_01329: MPMX20_01329 - Ferric uptake regulation protein, at 1,388,483 to 1,388,929
_01329
Position (kb)
1386
1387
1388 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1386.123 kb on + strand at 1386.151 kb on + strand at 1386.156 kb on + strand at 1386.161 kb on + strand at 1386.161 kb on + strand at 1386.166 kb on + strand at 1386.166 kb on + strand at 1386.166 kb on + strand at 1386.166 kb on + strand at 1386.166 kb on + strand at 1386.169 kb on - strand at 1386.182 kb on + strand at 1386.254 kb on + strand at 1386.254 kb on + strand at 1386.254 kb on + strand at 1386.254 kb on + strand at 1386.256 kb on + strand at 1386.256 kb on + strand at 1386.262 kb on - strand at 1386.262 kb on - strand at 1386.264 kb on - strand at 1386.264 kb on - strand at 1386.266 kb on + strand at 1386.528 kb on - strand at 1386.547 kb on - strand at 1386.564 kb on + strand at 1386.564 kb on + strand at 1386.572 kb on - strand at 1386.590 kb on + strand at 1386.598 kb on - strand at 1386.598 kb on - strand at 1386.598 kb on - strand at 1386.598 kb on - strand at 1386.598 kb on - strand at 1386.598 kb on - strand at 1386.621 kb on - strand at 1386.623 kb on - strand at 1386.623 kb on - strand at 1386.630 kb on - strand at 1386.632 kb on + strand at 1386.637 kb on - strand at 1386.638 kb on + strand at 1386.638 kb on + strand at 1386.639 kb on + strand at 1386.640 kb on - strand at 1386.640 kb on - strand at 1386.640 kb on - strand at 1386.646 kb on - strand at 1386.646 kb on - strand at 1386.646 kb on - strand at 1386.646 kb on - strand at 1386.646 kb on - strand at 1386.661 kb on + strand at 1386.666 kb on + strand at 1386.669 kb on - strand at 1386.686 kb on + strand at 1386.686 kb on + strand at 1386.686 kb on + strand at 1386.686 kb on + strand at 1386.686 kb on + strand at 1386.686 kb on + strand at 1386.686 kb on + strand at 1386.692 kb on + strand at 1386.694 kb on - strand at 1386.694 kb on - strand at 1386.694 kb on - strand at 1386.694 kb on - strand at 1386.694 kb on - strand at 1386.694 kb on - strand at 1386.694 kb on - strand at 1386.699 kb on + strand at 1386.720 kb on - strand at 1386.730 kb on + strand at 1386.730 kb on + strand at 1386.738 kb on - strand at 1386.746 kb on + strand, within MPMX20_01327 at 1386.746 kb on + strand, within MPMX20_01327 at 1386.746 kb on + strand, within MPMX20_01327 at 1386.746 kb on + strand, within MPMX20_01327 at 1386.746 kb on + strand, within MPMX20_01327 at 1386.754 kb on - strand, within MPMX20_01327 at 1386.760 kb on + strand, within MPMX20_01327 at 1386.766 kb on + strand, within MPMX20_01327 at 1386.797 kb on + strand, within MPMX20_01327 at 1386.801 kb on + strand, within MPMX20_01327 at 1386.801 kb on + strand, within MPMX20_01327 at 1386.805 kb on - strand, within MPMX20_01327 at 1386.807 kb on + strand, within MPMX20_01327 at 1386.815 kb on + strand, within MPMX20_01327 at 1386.815 kb on - strand, within MPMX20_01327 at 1386.815 kb on - strand, within MPMX20_01327 at 1386.829 kb on - strand, within MPMX20_01327 at 1386.836 kb on + strand, within MPMX20_01327 at 1386.837 kb on + strand, within MPMX20_01327 at 1386.837 kb on + strand, within MPMX20_01327 at 1386.837 kb on + strand, within MPMX20_01327 at 1386.845 kb on - strand, within MPMX20_01327 at 1386.859 kb on + strand, within MPMX20_01327 at 1386.859 kb on + strand, within MPMX20_01327 at 1386.871 kb on - strand, within MPMX20_01327 at 1386.910 kb on + strand, within MPMX20_01327 at 1386.915 kb on + strand, within MPMX20_01327 at 1386.943 kb on + strand, within MPMX20_01327 at 1386.985 kb on + strand, within MPMX20_01327 at 1386.985 kb on + strand, within MPMX20_01327 at 1386.993 kb on - strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1386.995 kb on + strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.003 kb on - strand, within MPMX20_01327 at 1387.029 kb on + strand, within MPMX20_01327 at 1387.045 kb on + strand, within MPMX20_01327 at 1387.063 kb on + strand, within MPMX20_01327 at 1387.070 kb on - strand, within MPMX20_01327 at 1387.071 kb on - strand, within MPMX20_01327 at 1387.071 kb on - strand, within MPMX20_01327 at 1387.071 kb on - strand, within MPMX20_01327 at 1387.090 kb on - strand, within MPMX20_01327 at 1387.093 kb on - strand, within MPMX20_01327 at 1387.097 kb on + strand, within MPMX20_01327 at 1387.102 kb on + strand, within MPMX20_01327 at 1387.102 kb on + strand, within MPMX20_01327 at 1387.105 kb on - strand, within MPMX20_01327 at 1387.105 kb on - strand, within MPMX20_01327 at 1387.105 kb on - strand, within MPMX20_01327 at 1387.110 kb on - strand, within MPMX20_01327 at 1387.110 kb on - strand, within MPMX20_01327 at 1387.132 kb on + strand, within MPMX20_01327 at 1387.139 kb on - strand, within MPMX20_01327 at 1387.141 kb on + strand, within MPMX20_01327 at 1387.149 kb on - strand, within MPMX20_01327 at 1387.172 kb on + strand, within MPMX20_01327 at 1387.181 kb on - strand, within MPMX20_01327 at 1387.194 kb on + strand, within MPMX20_01327 at 1387.195 kb on - strand, within MPMX20_01327 at 1387.205 kb on - strand, within MPMX20_01327 at 1387.219 kb on + strand, within MPMX20_01327 at 1387.227 kb on - strand, within MPMX20_01327 at 1387.227 kb on - strand, within MPMX20_01327 at 1387.246 kb on + strand, within MPMX20_01327 at 1387.250 kb on + strand, within MPMX20_01327 at 1387.258 kb on - strand, within MPMX20_01327 at 1387.259 kb on - strand, within MPMX20_01327 at 1387.263 kb on - strand, within MPMX20_01327 at 1387.299 kb on + strand, within MPMX20_01327 at 1387.312 kb on + strand, within MPMX20_01327 at 1387.320 kb on - strand, within MPMX20_01327 at 1387.322 kb on + strand, within MPMX20_01327 at 1387.322 kb on + strand, within MPMX20_01327 at 1387.322 kb on + strand, within MPMX20_01327 at 1387.329 kb on + strand, within MPMX20_01327 at 1387.330 kb on - strand, within MPMX20_01327 at 1387.330 kb on - strand, within MPMX20_01327 at 1387.330 kb on - strand, within MPMX20_01327 at 1387.330 kb on - strand, within MPMX20_01327 at 1387.330 kb on - strand, within MPMX20_01327 at 1387.330 kb on - strand, within MPMX20_01327 at 1387.336 kb on - strand, within MPMX20_01327 at 1387.396 kb on + strand, within MPMX20_01327 at 1387.406 kb on + strand, within MPMX20_01327 at 1387.414 kb on - strand, within MPMX20_01327 at 1387.414 kb on - strand, within MPMX20_01327 at 1387.536 kb on - strand, within MPMX20_01327 at 1387.548 kb on + strand, within MPMX20_01327 at 1387.566 kb on - strand, within MPMX20_01327 at 1387.638 kb on - strand, within MPMX20_01327 at 1387.638 kb on - strand, within MPMX20_01327 at 1387.768 kb on - strand, within MPMX20_01327 at 1387.776 kb on - strand, within MPMX20_01327 at 1387.808 kb on + strand, within MPMX20_01327 at 1387.844 kb on + strand, within MPMX20_01327 at 1387.844 kb on + strand, within MPMX20_01327 at 1387.852 kb on - strand, within MPMX20_01327 at 1387.868 kb on + strand at 1387.948 kb on - strand at 1387.991 kb on + strand at 1388.094 kb on + strand, within MPMX20_01328 at 1388.160 kb on - strand, within MPMX20_01328 at 1388.160 kb on - strand, within MPMX20_01328 at 1388.162 kb on + strand, within MPMX20_01328 at 1388.162 kb on + strand, within MPMX20_01328 at 1388.283 kb on + strand, within MPMX20_01328 at 1388.283 kb on + strand, within MPMX20_01328 at 1388.283 kb on + strand, within MPMX20_01328 at 1388.291 kb on - strand, within MPMX20_01328 at 1388.336 kb on - strand, within MPMX20_01328 at 1388.402 kb on + strand at 1388.460 kb on + strand at 1388.545 kb on + strand, within MPMX20_01329 at 1388.654 kb on + strand, within MPMX20_01329 at 1388.654 kb on + strand, within MPMX20_01329 at 1388.895 kb on - strand at 1388.906 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 1,386,123 + +4.0 1,386,151 + +1.1 1,386,156 + +0.7 1,386,161 + +0.7 1,386,161 + -1.8 1,386,166 + -0.4 1,386,166 + +0.5 1,386,166 + -0.0 1,386,166 + -0.6 1,386,166 + -0.2 1,386,169 - +0.5 1,386,182 + +0.3 1,386,254 + -1.3 1,386,254 + -0.6 1,386,254 + +0.6 1,386,254 + -2.0 1,386,256 + +0.7 1,386,256 + -2.3 1,386,262 - +0.2 1,386,262 - +2.0 1,386,264 - +0.3 1,386,264 - -0.5 1,386,266 + +1.7 1,386,528 - +0.1 1,386,547 - +0.7 1,386,564 + -0.5 1,386,564 + -0.5 1,386,572 - -0.7 1,386,590 + -0.1 1,386,598 - -0.6 1,386,598 - +0.4 1,386,598 - -0.2 1,386,598 - -0.1 1,386,598 - +0.7 1,386,598 - -1.6 1,386,621 - +0.2 1,386,623 - +2.7 1,386,623 - -0.2 1,386,630 - +0.4 1,386,632 + +0.8 1,386,637 - +1.2 1,386,638 + -0.1 1,386,638 + +0.1 1,386,639 + -0.2 1,386,640 - +2.5 1,386,640 - +1.3 1,386,640 - -1.9 1,386,646 - +0.3 1,386,646 - -1.0 1,386,646 - +0.2 1,386,646 - +0.6 1,386,646 - -0.6 1,386,661 + -0.8 1,386,666 + +0.9 1,386,669 - -0.0 1,386,686 + -0.9 1,386,686 + -0.6 1,386,686 + +0.6 1,386,686 + -1.0 1,386,686 + -1.6 1,386,686 + -0.9 1,386,686 + -0.6 1,386,692 + +1.5 1,386,694 - +0.5 1,386,694 - -0.3 1,386,694 - +1.1 1,386,694 - +0.7 1,386,694 - +1.0 1,386,694 - +0.7 1,386,694 - +0.7 1,386,699 + -1.0 1,386,720 - +0.7 1,386,730 + -0.5 1,386,730 + -0.8 1,386,738 - -0.2 1,386,746 + MPMX20_01327 0.10 +2.0 1,386,746 + MPMX20_01327 0.10 +1.0 1,386,746 + MPMX20_01327 0.10 +0.4 1,386,746 + MPMX20_01327 0.10 -0.6 1,386,746 + MPMX20_01327 0.10 +2.0 1,386,754 - MPMX20_01327 0.11 -0.0 1,386,760 + MPMX20_01327 0.11 +1.2 1,386,766 + MPMX20_01327 0.12 -0.3 1,386,797 + MPMX20_01327 0.14 -0.2 1,386,801 + MPMX20_01327 0.14 -0.2 1,386,801 + MPMX20_01327 0.14 +1.7 1,386,805 - MPMX20_01327 0.15 -1.3 1,386,807 + MPMX20_01327 0.15 +0.1 1,386,815 + MPMX20_01327 0.15 +0.5 1,386,815 - MPMX20_01327 0.15 -0.4 1,386,815 - MPMX20_01327 0.15 -0.2 1,386,829 - MPMX20_01327 0.16 -0.2 1,386,836 + MPMX20_01327 0.17 -0.3 1,386,837 + MPMX20_01327 0.17 +1.9 1,386,837 + MPMX20_01327 0.17 -0.2 1,386,837 + MPMX20_01327 0.17 +0.9 1,386,845 - MPMX20_01327 0.18 -0.8 1,386,859 + MPMX20_01327 0.19 -0.0 1,386,859 + MPMX20_01327 0.19 +0.4 1,386,871 - MPMX20_01327 0.19 +2.0 1,386,910 + MPMX20_01327 0.22 +0.4 1,386,915 + MPMX20_01327 0.23 -0.0 1,386,943 + MPMX20_01327 0.25 -1.1 1,386,985 + MPMX20_01327 0.28 -0.4 1,386,985 + MPMX20_01327 0.28 -1.0 1,386,993 - MPMX20_01327 0.28 +0.1 1,386,995 + MPMX20_01327 0.28 -0.6 1,386,995 + MPMX20_01327 0.28 +0.6 1,386,995 + MPMX20_01327 0.28 -1.4 1,386,995 + MPMX20_01327 0.28 +1.4 1,386,995 + MPMX20_01327 0.28 -0.2 1,386,995 + MPMX20_01327 0.28 +0.0 1,386,995 + MPMX20_01327 0.28 -0.4 1,386,995 + MPMX20_01327 0.28 +0.3 1,387,003 - MPMX20_01327 0.29 -1.5 1,387,003 - MPMX20_01327 0.29 +0.3 1,387,003 - MPMX20_01327 0.29 +0.5 1,387,003 - MPMX20_01327 0.29 -0.6 1,387,003 - MPMX20_01327 0.29 -0.8 1,387,003 - MPMX20_01327 0.29 +0.4 1,387,003 - MPMX20_01327 0.29 -0.5 1,387,003 - MPMX20_01327 0.29 +0.4 1,387,029 + MPMX20_01327 0.31 -0.3 1,387,045 + MPMX20_01327 0.32 -0.8 1,387,063 + MPMX20_01327 0.33 -2.8 1,387,070 - MPMX20_01327 0.34 +2.0 1,387,071 - MPMX20_01327 0.34 +2.9 1,387,071 - MPMX20_01327 0.34 -0.1 1,387,071 - MPMX20_01327 0.34 -0.7 1,387,090 - MPMX20_01327 0.35 -0.6 1,387,093 - MPMX20_01327 0.35 +1.5 1,387,097 + MPMX20_01327 0.36 +0.4 1,387,102 + MPMX20_01327 0.36 -0.1 1,387,102 + MPMX20_01327 0.36 -1.4 1,387,105 - MPMX20_01327 0.36 +0.2 1,387,105 - MPMX20_01327 0.36 +0.3 1,387,105 - MPMX20_01327 0.36 -0.9 1,387,110 - MPMX20_01327 0.36 -1.3 1,387,110 - MPMX20_01327 0.36 +0.6 1,387,132 + MPMX20_01327 0.38 +0.9 1,387,139 - MPMX20_01327 0.39 +0.4 1,387,141 + MPMX20_01327 0.39 -0.1 1,387,149 - MPMX20_01327 0.39 -0.2 1,387,172 + MPMX20_01327 0.41 +0.2 1,387,181 - MPMX20_01327 0.42 +0.0 1,387,194 + MPMX20_01327 0.42 +2.0 1,387,195 - MPMX20_01327 0.43 +0.1 1,387,205 - MPMX20_01327 0.43 +1.0 1,387,219 + MPMX20_01327 0.44 +0.5 1,387,227 - MPMX20_01327 0.45 +0.5 1,387,227 - MPMX20_01327 0.45 -0.6 1,387,246 + MPMX20_01327 0.46 +0.8 1,387,250 + MPMX20_01327 0.46 -1.4 1,387,258 - MPMX20_01327 0.47 +0.2 1,387,259 - MPMX20_01327 0.47 -0.2 1,387,263 - MPMX20_01327 0.47 -0.0 1,387,299 + MPMX20_01327 0.50 +0.2 1,387,312 + MPMX20_01327 0.51 -0.8 1,387,320 - MPMX20_01327 0.52 -0.8 1,387,322 + MPMX20_01327 0.52 +0.9 1,387,322 + MPMX20_01327 0.52 -0.2 1,387,322 + MPMX20_01327 0.52 -0.5 1,387,329 + MPMX20_01327 0.52 +0.2 1,387,330 - MPMX20_01327 0.52 -0.1 1,387,330 - MPMX20_01327 0.52 +1.1 1,387,330 - MPMX20_01327 0.52 -0.0 1,387,330 - MPMX20_01327 0.52 +0.2 1,387,330 - MPMX20_01327 0.52 +0.4 1,387,330 - MPMX20_01327 0.52 +0.0 1,387,336 - MPMX20_01327 0.53 +0.6 1,387,396 + MPMX20_01327 0.57 +1.1 1,387,406 + MPMX20_01327 0.58 -1.6 1,387,414 - MPMX20_01327 0.58 -0.3 1,387,414 - MPMX20_01327 0.58 +1.1 1,387,536 - MPMX20_01327 0.67 +0.7 1,387,548 + MPMX20_01327 0.68 -1.2 1,387,566 - MPMX20_01327 0.69 +1.0 1,387,638 - MPMX20_01327 0.74 +0.7 1,387,638 - MPMX20_01327 0.74 -1.3 1,387,768 - MPMX20_01327 0.84 +0.6 1,387,776 - MPMX20_01327 0.84 -0.2 1,387,808 + MPMX20_01327 0.86 -0.4 1,387,844 + MPMX20_01327 0.89 +0.9 1,387,844 + MPMX20_01327 0.89 +1.4 1,387,852 - MPMX20_01327 0.90 -1.1 1,387,868 + -0.6 1,387,948 - -1.0 1,387,991 + +1.5 1,388,094 + MPMX20_01328 0.16 -0.5 1,388,160 - MPMX20_01328 0.35 -1.7 1,388,160 - MPMX20_01328 0.35 +0.8 1,388,162 + MPMX20_01328 0.36 +0.6 1,388,162 + MPMX20_01328 0.36 +0.8 1,388,283 + MPMX20_01328 0.72 +0.1 1,388,283 + MPMX20_01328 0.72 -1.1 1,388,283 + MPMX20_01328 0.72 +0.3 1,388,291 - MPMX20_01328 0.75 -1.2 1,388,336 - MPMX20_01328 0.88 +0.2 1,388,402 + -1.8 1,388,460 + -2.9 1,388,545 + MPMX20_01329 0.14 -0.3 1,388,654 + MPMX20_01329 0.38 -1.1 1,388,654 + MPMX20_01329 0.38 -1.3 1,388,895 - -1.1 1,388,906 - -0.6
Or see this region's nucleotide sequence