Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03090 and MPMX20_03091 are separated by 64 nucleotides MPMX20_03091 and MPMX20_03092 are separated by 51 nucleotides MPMX20_03092 and MPMX20_03093 overlap by 7 nucleotides
MPMX20_03090: MPMX20_03090 - Methionine--tRNA ligase, at 3,242,267 to 3,244,300
_03090
MPMX20_03091: MPMX20_03091 - hypothetical protein, at 3,244,365 to 3,244,835
_03091
MPMX20_03092: MPMX20_03092 - Transcriptional regulatory protein BtsR, at 3,244,887 to 3,245,606
_03092
MPMX20_03093: MPMX20_03093 - Sensor histidine kinase BtsS, at 3,245,600 to 3,247,291
_03093
Position (kb)
3244
3245
3246 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3243.932 kb on + strand, within MPMX20_03090 at 3244.088 kb on + strand, within MPMX20_03090 at 3244.260 kb on + strand at 3244.338 kb on + strand at 3244.353 kb on + strand at 3244.358 kb on + strand at 3244.361 kb on - strand at 3244.361 kb on - strand at 3244.361 kb on - strand at 3244.361 kb on - strand at 3244.391 kb on + strand at 3244.472 kb on - strand, within MPMX20_03091 at 3244.508 kb on - strand, within MPMX20_03091 at 3244.559 kb on + strand, within MPMX20_03091 at 3244.578 kb on - strand, within MPMX20_03091 at 3244.667 kb on + strand, within MPMX20_03091 at 3244.667 kb on + strand, within MPMX20_03091 at 3244.681 kb on - strand, within MPMX20_03091 at 3244.730 kb on + strand, within MPMX20_03091 at 3244.737 kb on + strand, within MPMX20_03091 at 3244.798 kb on + strand at 3244.798 kb on + strand at 3244.806 kb on - strand at 3244.806 kb on - strand at 3245.048 kb on + strand, within MPMX20_03092 at 3245.102 kb on - strand, within MPMX20_03092 at 3245.107 kb on - strand, within MPMX20_03092 at 3245.167 kb on + strand, within MPMX20_03092 at 3245.188 kb on + strand, within MPMX20_03092 at 3245.191 kb on - strand, within MPMX20_03092 at 3245.195 kb on + strand, within MPMX20_03092 at 3245.196 kb on - strand, within MPMX20_03092 at 3245.246 kb on - strand, within MPMX20_03092 at 3245.287 kb on - strand, within MPMX20_03092 at 3245.330 kb on + strand, within MPMX20_03092 at 3245.338 kb on - strand, within MPMX20_03092 at 3245.390 kb on + strand, within MPMX20_03092 at 3245.422 kb on - strand, within MPMX20_03092 at 3245.422 kb on - strand, within MPMX20_03092 at 3245.461 kb on + strand, within MPMX20_03092 at 3245.490 kb on - strand, within MPMX20_03092 at 3245.521 kb on + strand, within MPMX20_03092 at 3245.535 kb on - strand at 3245.605 kb on - strand at 3245.605 kb on - strand at 3245.635 kb on + strand at 3245.650 kb on + strand at 3245.725 kb on + strand at 3245.741 kb on + strand at 3245.752 kb on + strand at 3245.766 kb on - strand at 3245.829 kb on + strand, within MPMX20_03093 at 3245.832 kb on - strand, within MPMX20_03093 at 3245.884 kb on + strand, within MPMX20_03093 at 3245.884 kb on + strand, within MPMX20_03093 at 3245.949 kb on + strand, within MPMX20_03093 at 3245.990 kb on - strand, within MPMX20_03093 at 3246.061 kb on - strand, within MPMX20_03093 at 3246.065 kb on - strand, within MPMX20_03093 at 3246.071 kb on - strand, within MPMX20_03093 at 3246.076 kb on + strand, within MPMX20_03093 at 3246.101 kb on + strand, within MPMX20_03093 at 3246.158 kb on - strand, within MPMX20_03093 at 3246.201 kb on + strand, within MPMX20_03093 at 3246.246 kb on - strand, within MPMX20_03093 at 3246.249 kb on + strand, within MPMX20_03093 at 3246.267 kb on - strand, within MPMX20_03093 at 3246.267 kb on - strand, within MPMX20_03093 at 3246.267 kb on - strand, within MPMX20_03093 at 3246.272 kb on - strand, within MPMX20_03093 at 3246.281 kb on - strand, within MPMX20_03093 at 3246.312 kb on - strand, within MPMX20_03093 at 3246.350 kb on + strand, within MPMX20_03093 at 3246.362 kb on + strand, within MPMX20_03093 at 3246.400 kb on - strand, within MPMX20_03093 at 3246.459 kb on - strand, within MPMX20_03093 at 3246.490 kb on - strand, within MPMX20_03093 at 3246.549 kb on + strand, within MPMX20_03093 at 3246.554 kb on + strand, within MPMX20_03093 at 3246.557 kb on - strand, within MPMX20_03093 at 3246.591 kb on - strand, within MPMX20_03093
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 3,243,932 + MPMX20_03090 0.82 -2.6 3,244,088 + MPMX20_03090 0.90 -1.8 3,244,260 + -0.0 3,244,338 + -1.0 3,244,353 + -0.3 3,244,358 + +1.1 3,244,361 - +0.4 3,244,361 - -0.5 3,244,361 - -0.2 3,244,361 - +0.5 3,244,391 + +0.3 3,244,472 - MPMX20_03091 0.23 -1.2 3,244,508 - MPMX20_03091 0.30 -0.8 3,244,559 + MPMX20_03091 0.41 -0.2 3,244,578 - MPMX20_03091 0.45 +0.6 3,244,667 + MPMX20_03091 0.64 +0.0 3,244,667 + MPMX20_03091 0.64 -0.3 3,244,681 - MPMX20_03091 0.67 -0.7 3,244,730 + MPMX20_03091 0.77 +1.3 3,244,737 + MPMX20_03091 0.79 +0.4 3,244,798 + -1.5 3,244,798 + +0.4 3,244,806 - -0.1 3,244,806 - +1.3 3,245,048 + MPMX20_03092 0.22 -1.9 3,245,102 - MPMX20_03092 0.30 -0.8 3,245,107 - MPMX20_03092 0.31 -0.8 3,245,167 + MPMX20_03092 0.39 -0.3 3,245,188 + MPMX20_03092 0.42 -0.5 3,245,191 - MPMX20_03092 0.42 +0.0 3,245,195 + MPMX20_03092 0.43 +0.3 3,245,196 - MPMX20_03092 0.43 +0.6 3,245,246 - MPMX20_03092 0.50 -1.1 3,245,287 - MPMX20_03092 0.56 +0.0 3,245,330 + MPMX20_03092 0.62 -0.4 3,245,338 - MPMX20_03092 0.63 -0.7 3,245,390 + MPMX20_03092 0.70 -0.9 3,245,422 - MPMX20_03092 0.74 -0.0 3,245,422 - MPMX20_03092 0.74 +0.2 3,245,461 + MPMX20_03092 0.80 -0.1 3,245,490 - MPMX20_03092 0.84 +0.9 3,245,521 + MPMX20_03092 0.88 +1.3 3,245,535 - -1.0 3,245,605 - +1.5 3,245,605 - +0.6 3,245,635 + -0.9 3,245,650 + +1.3 3,245,725 + +2.3 3,245,741 + -0.8 3,245,752 + -2.7 3,245,766 - +0.1 3,245,829 + MPMX20_03093 0.14 -0.4 3,245,832 - MPMX20_03093 0.14 +0.8 3,245,884 + MPMX20_03093 0.17 -2.2 3,245,884 + MPMX20_03093 0.17 +0.0 3,245,949 + MPMX20_03093 0.21 +0.5 3,245,990 - MPMX20_03093 0.23 -0.9 3,246,061 - MPMX20_03093 0.27 -0.9 3,246,065 - MPMX20_03093 0.27 +3.1 3,246,071 - MPMX20_03093 0.28 -0.6 3,246,076 + MPMX20_03093 0.28 -1.2 3,246,101 + MPMX20_03093 0.30 -2.3 3,246,158 - MPMX20_03093 0.33 -0.1 3,246,201 + MPMX20_03093 0.36 -1.1 3,246,246 - MPMX20_03093 0.38 +2.3 3,246,249 + MPMX20_03093 0.38 +1.2 3,246,267 - MPMX20_03093 0.39 +2.3 3,246,267 - MPMX20_03093 0.39 +1.2 3,246,267 - MPMX20_03093 0.39 +0.9 3,246,272 - MPMX20_03093 0.40 +0.1 3,246,281 - MPMX20_03093 0.40 +0.1 3,246,312 - MPMX20_03093 0.42 +0.6 3,246,350 + MPMX20_03093 0.44 +0.6 3,246,362 + MPMX20_03093 0.45 +0.5 3,246,400 - MPMX20_03093 0.47 -0.4 3,246,459 - MPMX20_03093 0.51 -0.9 3,246,490 - MPMX20_03093 0.53 -0.6 3,246,549 + MPMX20_03093 0.56 +1.0 3,246,554 + MPMX20_03093 0.56 +1.1 3,246,557 - MPMX20_03093 0.57 -0.6 3,246,591 - MPMX20_03093 0.59 -1.8
Or see this region's nucleotide sequence