Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02033

Experiment: NAG (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02032 and MPMX20_02033 are separated by 50 nucleotidesMPMX20_02033 and MPMX20_02034 are separated by 110 nucleotidesMPMX20_02034 and MPMX20_02035 are separated by 134 nucleotides MPMX20_02032: MPMX20_02032 - NAD(P) transhydrogenase subunit beta, at 2,124,688 to 2,126,076 _02032 MPMX20_02033: MPMX20_02033 - Universal stress protein E, at 2,126,127 to 2,127,077 _02033 MPMX20_02034: MPMX20_02034 - hypothetical protein, at 2,127,188 to 2,127,382 _02034 MPMX20_02035: MPMX20_02035 - Fumarate and nitrate reduction regulatory protein, at 2,127,517 to 2,128,269 _02035 Position (kb) 2126 2127 2128Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2125.147 kb on + strand, within MPMX20_02032at 2125.174 kb on - strand, within MPMX20_02032at 2125.200 kb on - strand, within MPMX20_02032at 2125.227 kb on + strand, within MPMX20_02032at 2125.257 kb on - strand, within MPMX20_02032at 2125.287 kb on - strand, within MPMX20_02032at 2125.319 kb on - strand, within MPMX20_02032at 2125.386 kb on + strand, within MPMX20_02032at 2125.395 kb on + strand, within MPMX20_02032at 2125.493 kb on + strand, within MPMX20_02032at 2125.547 kb on + strand, within MPMX20_02032at 2125.552 kb on + strand, within MPMX20_02032at 2125.609 kb on - strand, within MPMX20_02032at 2125.627 kb on + strand, within MPMX20_02032at 2125.664 kb on - strand, within MPMX20_02032at 2125.676 kb on + strand, within MPMX20_02032at 2125.697 kb on + strand, within MPMX20_02032at 2125.697 kb on + strand, within MPMX20_02032at 2125.705 kb on - strand, within MPMX20_02032at 2125.739 kb on + strand, within MPMX20_02032at 2125.819 kb on + strand, within MPMX20_02032at 2125.873 kb on - strand, within MPMX20_02032at 2125.949 kb on - strandat 2126.051 kb on - strandat 2126.071 kb on + strandat 2126.159 kb on - strandat 2126.208 kb on + strandat 2126.266 kb on + strand, within MPMX20_02033at 2126.274 kb on - strand, within MPMX20_02033at 2126.276 kb on + strand, within MPMX20_02033at 2126.292 kb on + strand, within MPMX20_02033at 2126.432 kb on - strand, within MPMX20_02033at 2126.432 kb on - strand, within MPMX20_02033at 2126.443 kb on + strand, within MPMX20_02033at 2126.446 kb on - strand, within MPMX20_02033at 2126.488 kb on + strand, within MPMX20_02033at 2126.512 kb on - strand, within MPMX20_02033at 2126.513 kb on + strand, within MPMX20_02033at 2126.519 kb on - strand, within MPMX20_02033at 2126.637 kb on + strand, within MPMX20_02033at 2126.645 kb on - strand, within MPMX20_02033at 2126.693 kb on + strand, within MPMX20_02033at 2126.741 kb on + strand, within MPMX20_02033at 2126.755 kb on - strand, within MPMX20_02033at 2126.756 kb on - strand, within MPMX20_02033at 2126.800 kb on + strand, within MPMX20_02033at 2126.802 kb on - strand, within MPMX20_02033at 2126.845 kb on + strand, within MPMX20_02033at 2126.853 kb on - strand, within MPMX20_02033at 2126.862 kb on + strand, within MPMX20_02033at 2126.898 kb on - strand, within MPMX20_02033at 2126.898 kb on - strand, within MPMX20_02033at 2126.898 kb on - strand, within MPMX20_02033at 2126.936 kb on + strand, within MPMX20_02033at 2126.957 kb on - strand, within MPMX20_02033at 2127.012 kb on + strandat 2127.020 kb on - strandat 2127.035 kb on + strandat 2127.035 kb on + strandat 2127.038 kb on - strandat 2127.043 kb on - strandat 2127.086 kb on + strandat 2127.086 kb on + strandat 2127.086 kb on + strandat 2127.093 kb on + strandat 2127.093 kb on + strandat 2127.094 kb on - strandat 2127.094 kb on - strandat 2127.094 kb on - strandat 2127.094 kb on - strandat 2127.094 kb on - strandat 2127.094 kb on - strandat 2127.094 kb on - strandat 2127.096 kb on - strandat 2127.103 kb on - strandat 2127.202 kb on + strandat 2127.217 kb on + strand, within MPMX20_02034at 2127.228 kb on + strand, within MPMX20_02034at 2127.306 kb on - strand, within MPMX20_02034at 2127.311 kb on - strand, within MPMX20_02034at 2127.313 kb on + strand, within MPMX20_02034at 2127.313 kb on + strand, within MPMX20_02034at 2127.313 kb on + strand, within MPMX20_02034at 2127.329 kb on + strand, within MPMX20_02034at 2127.382 kb on + strandat 2127.415 kb on + strandat 2127.423 kb on - strandat 2127.522 kb on - strandat 2127.654 kb on + strand, within MPMX20_02035at 2127.654 kb on + strand, within MPMX20_02035at 2127.662 kb on - strand, within MPMX20_02035at 2127.662 kb on - strand, within MPMX20_02035at 2127.812 kb on + strand, within MPMX20_02035at 2127.820 kb on - strand, within MPMX20_02035at 2127.935 kb on - strand, within MPMX20_02035at 2127.948 kb on + strand, within MPMX20_02035at 2127.998 kb on + strand, within MPMX20_02035at 2128.006 kb on - strand, within MPMX20_02035at 2128.016 kb on - strand, within MPMX20_02035at 2128.028 kb on - strand, within MPMX20_02035at 2128.064 kb on - strand, within MPMX20_02035at 2128.064 kb on - strand, within MPMX20_02035

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction NAG (C)
remove
2,125,147 + MPMX20_02032 0.33 -0.3
2,125,174 - MPMX20_02032 0.35 -2.5
2,125,200 - MPMX20_02032 0.37 -1.6
2,125,227 + MPMX20_02032 0.39 +0.1
2,125,257 - MPMX20_02032 0.41 -2.0
2,125,287 - MPMX20_02032 0.43 +2.5
2,125,319 - MPMX20_02032 0.45 -1.2
2,125,386 + MPMX20_02032 0.50 -0.8
2,125,395 + MPMX20_02032 0.51 +0.1
2,125,493 + MPMX20_02032 0.58 -1.0
2,125,547 + MPMX20_02032 0.62 +0.9
2,125,552 + MPMX20_02032 0.62 -0.5
2,125,609 - MPMX20_02032 0.66 -1.7
2,125,627 + MPMX20_02032 0.68 -1.6
2,125,664 - MPMX20_02032 0.70 -1.4
2,125,676 + MPMX20_02032 0.71 -0.1
2,125,697 + MPMX20_02032 0.73 -0.4
2,125,697 + MPMX20_02032 0.73 -0.8
2,125,705 - MPMX20_02032 0.73 +0.1
2,125,739 + MPMX20_02032 0.76 -1.3
2,125,819 + MPMX20_02032 0.81 -0.5
2,125,873 - MPMX20_02032 0.85 -0.8
2,125,949 - -0.7
2,126,051 - -1.5
2,126,071 + -1.2
2,126,159 - -0.5
2,126,208 + -3.5
2,126,266 + MPMX20_02033 0.15 -1.1
2,126,274 - MPMX20_02033 0.15 +1.0
2,126,276 + MPMX20_02033 0.16 -0.9
2,126,292 + MPMX20_02033 0.17 -0.4
2,126,432 - MPMX20_02033 0.32 +0.9
2,126,432 - MPMX20_02033 0.32 -0.8
2,126,443 + MPMX20_02033 0.33 -0.4
2,126,446 - MPMX20_02033 0.34 +4.4
2,126,488 + MPMX20_02033 0.38 -0.6
2,126,512 - MPMX20_02033 0.40 +0.7
2,126,513 + MPMX20_02033 0.41 -0.8
2,126,519 - MPMX20_02033 0.41 +1.1
2,126,637 + MPMX20_02033 0.54 +0.6
2,126,645 - MPMX20_02033 0.54 -2.0
2,126,693 + MPMX20_02033 0.60 -0.7
2,126,741 + MPMX20_02033 0.65 -1.5
2,126,755 - MPMX20_02033 0.66 -0.7
2,126,756 - MPMX20_02033 0.66 -0.1
2,126,800 + MPMX20_02033 0.71 -0.0
2,126,802 - MPMX20_02033 0.71 -1.9
2,126,845 + MPMX20_02033 0.75 -2.8
2,126,853 - MPMX20_02033 0.76 +0.4
2,126,862 + MPMX20_02033 0.77 -0.6
2,126,898 - MPMX20_02033 0.81 -0.4
2,126,898 - MPMX20_02033 0.81 +0.8
2,126,898 - MPMX20_02033 0.81 +0.1
2,126,936 + MPMX20_02033 0.85 -0.1
2,126,957 - MPMX20_02033 0.87 +1.2
2,127,012 + -0.4
2,127,020 - +0.5
2,127,035 + -1.5
2,127,035 + +0.1
2,127,038 - -0.3
2,127,043 - -0.3
2,127,086 + -0.1
2,127,086 + -0.3
2,127,086 + +0.7
2,127,093 + -1.8
2,127,093 + -1.4
2,127,094 - +1.6
2,127,094 - -2.7
2,127,094 - +0.3
2,127,094 - -2.0
2,127,094 - -0.3
2,127,094 - +0.1
2,127,094 - -2.0
2,127,096 - -0.0
2,127,103 - -1.6
2,127,202 + -1.4
2,127,217 + MPMX20_02034 0.15 -2.1
2,127,228 + MPMX20_02034 0.21 -1.9
2,127,306 - MPMX20_02034 0.61 -0.8
2,127,311 - MPMX20_02034 0.63 -1.4
2,127,313 + MPMX20_02034 0.64 -0.6
2,127,313 + MPMX20_02034 0.64 +0.2
2,127,313 + MPMX20_02034 0.64 +2.0
2,127,329 + MPMX20_02034 0.72 +0.6
2,127,382 + +0.3
2,127,415 + +1.0
2,127,423 - -0.3
2,127,522 - +3.8
2,127,654 + MPMX20_02035 0.18 -0.7
2,127,654 + MPMX20_02035 0.18 +0.1
2,127,662 - MPMX20_02035 0.19 -2.3
2,127,662 - MPMX20_02035 0.19 -1.0
2,127,812 + MPMX20_02035 0.39 -3.7
2,127,820 - MPMX20_02035 0.40 +0.7
2,127,935 - MPMX20_02035 0.56 +0.3
2,127,948 + MPMX20_02035 0.57 -3.2
2,127,998 + MPMX20_02035 0.64 -1.6
2,128,006 - MPMX20_02035 0.65 -1.1
2,128,016 - MPMX20_02035 0.66 -0.1
2,128,028 - MPMX20_02035 0.68 +2.8
2,128,064 - MPMX20_02035 0.73 -0.8
2,128,064 - MPMX20_02035 0.73 -0.6

Or see this region's nucleotide sequence