Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02032 and MPMX20_02033 are separated by 50 nucleotides MPMX20_02033 and MPMX20_02034 are separated by 110 nucleotides MPMX20_02034 and MPMX20_02035 are separated by 134 nucleotides
MPMX20_02032: MPMX20_02032 - NAD(P) transhydrogenase subunit beta, at 2,124,688 to 2,126,076
_02032
MPMX20_02033: MPMX20_02033 - Universal stress protein E, at 2,126,127 to 2,127,077
_02033
MPMX20_02034: MPMX20_02034 - hypothetical protein, at 2,127,188 to 2,127,382
_02034
MPMX20_02035: MPMX20_02035 - Fumarate and nitrate reduction regulatory protein, at 2,127,517 to 2,128,269
_02035
Position (kb)
2126
2127
2128 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2125.147 kb on + strand, within MPMX20_02032 at 2125.174 kb on - strand, within MPMX20_02032 at 2125.200 kb on - strand, within MPMX20_02032 at 2125.227 kb on + strand, within MPMX20_02032 at 2125.257 kb on - strand, within MPMX20_02032 at 2125.287 kb on - strand, within MPMX20_02032 at 2125.319 kb on - strand, within MPMX20_02032 at 2125.386 kb on + strand, within MPMX20_02032 at 2125.395 kb on + strand, within MPMX20_02032 at 2125.493 kb on + strand, within MPMX20_02032 at 2125.547 kb on + strand, within MPMX20_02032 at 2125.552 kb on + strand, within MPMX20_02032 at 2125.609 kb on - strand, within MPMX20_02032 at 2125.627 kb on + strand, within MPMX20_02032 at 2125.664 kb on - strand, within MPMX20_02032 at 2125.676 kb on + strand, within MPMX20_02032 at 2125.697 kb on + strand, within MPMX20_02032 at 2125.697 kb on + strand, within MPMX20_02032 at 2125.705 kb on - strand, within MPMX20_02032 at 2125.739 kb on + strand, within MPMX20_02032 at 2125.819 kb on + strand, within MPMX20_02032 at 2125.873 kb on - strand, within MPMX20_02032 at 2125.949 kb on - strand at 2126.051 kb on - strand at 2126.071 kb on + strand at 2126.159 kb on - strand at 2126.208 kb on + strand at 2126.266 kb on + strand, within MPMX20_02033 at 2126.274 kb on - strand, within MPMX20_02033 at 2126.276 kb on + strand, within MPMX20_02033 at 2126.292 kb on + strand, within MPMX20_02033 at 2126.432 kb on - strand, within MPMX20_02033 at 2126.432 kb on - strand, within MPMX20_02033 at 2126.443 kb on + strand, within MPMX20_02033 at 2126.446 kb on - strand, within MPMX20_02033 at 2126.488 kb on + strand, within MPMX20_02033 at 2126.512 kb on - strand, within MPMX20_02033 at 2126.513 kb on + strand, within MPMX20_02033 at 2126.519 kb on - strand, within MPMX20_02033 at 2126.637 kb on + strand, within MPMX20_02033 at 2126.645 kb on - strand, within MPMX20_02033 at 2126.693 kb on + strand, within MPMX20_02033 at 2126.741 kb on + strand, within MPMX20_02033 at 2126.755 kb on - strand, within MPMX20_02033 at 2126.756 kb on - strand, within MPMX20_02033 at 2126.800 kb on + strand, within MPMX20_02033 at 2126.802 kb on - strand, within MPMX20_02033 at 2126.845 kb on + strand, within MPMX20_02033 at 2126.853 kb on - strand, within MPMX20_02033 at 2126.862 kb on + strand, within MPMX20_02033 at 2126.898 kb on - strand, within MPMX20_02033 at 2126.898 kb on - strand, within MPMX20_02033 at 2126.898 kb on - strand, within MPMX20_02033 at 2126.936 kb on + strand, within MPMX20_02033 at 2126.957 kb on - strand, within MPMX20_02033 at 2127.012 kb on + strand at 2127.020 kb on - strand at 2127.035 kb on + strand at 2127.035 kb on + strand at 2127.038 kb on - strand at 2127.043 kb on - strand at 2127.086 kb on + strand at 2127.086 kb on + strand at 2127.086 kb on + strand at 2127.093 kb on + strand at 2127.093 kb on + strand at 2127.094 kb on - strand at 2127.094 kb on - strand at 2127.094 kb on - strand at 2127.094 kb on - strand at 2127.094 kb on - strand at 2127.094 kb on - strand at 2127.094 kb on - strand at 2127.096 kb on - strand at 2127.103 kb on - strand at 2127.202 kb on + strand at 2127.217 kb on + strand, within MPMX20_02034 at 2127.228 kb on + strand, within MPMX20_02034 at 2127.306 kb on - strand, within MPMX20_02034 at 2127.311 kb on - strand, within MPMX20_02034 at 2127.313 kb on + strand, within MPMX20_02034 at 2127.313 kb on + strand, within MPMX20_02034 at 2127.313 kb on + strand, within MPMX20_02034 at 2127.329 kb on + strand, within MPMX20_02034 at 2127.382 kb on + strand at 2127.415 kb on + strand at 2127.423 kb on - strand at 2127.522 kb on - strand at 2127.654 kb on + strand, within MPMX20_02035 at 2127.654 kb on + strand, within MPMX20_02035 at 2127.662 kb on - strand, within MPMX20_02035 at 2127.662 kb on - strand, within MPMX20_02035 at 2127.812 kb on + strand, within MPMX20_02035 at 2127.820 kb on - strand, within MPMX20_02035 at 2127.935 kb on - strand, within MPMX20_02035 at 2127.948 kb on + strand, within MPMX20_02035 at 2127.998 kb on + strand, within MPMX20_02035 at 2128.006 kb on - strand, within MPMX20_02035 at 2128.016 kb on - strand, within MPMX20_02035 at 2128.028 kb on - strand, within MPMX20_02035 at 2128.064 kb on - strand, within MPMX20_02035 at 2128.064 kb on - strand, within MPMX20_02035
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 2,125,147 + MPMX20_02032 0.33 -0.3 2,125,174 - MPMX20_02032 0.35 -2.5 2,125,200 - MPMX20_02032 0.37 -1.6 2,125,227 + MPMX20_02032 0.39 +0.1 2,125,257 - MPMX20_02032 0.41 -2.0 2,125,287 - MPMX20_02032 0.43 +2.5 2,125,319 - MPMX20_02032 0.45 -1.2 2,125,386 + MPMX20_02032 0.50 -0.8 2,125,395 + MPMX20_02032 0.51 +0.1 2,125,493 + MPMX20_02032 0.58 -1.0 2,125,547 + MPMX20_02032 0.62 +0.9 2,125,552 + MPMX20_02032 0.62 -0.5 2,125,609 - MPMX20_02032 0.66 -1.7 2,125,627 + MPMX20_02032 0.68 -1.6 2,125,664 - MPMX20_02032 0.70 -1.4 2,125,676 + MPMX20_02032 0.71 -0.1 2,125,697 + MPMX20_02032 0.73 -0.4 2,125,697 + MPMX20_02032 0.73 -0.8 2,125,705 - MPMX20_02032 0.73 +0.1 2,125,739 + MPMX20_02032 0.76 -1.3 2,125,819 + MPMX20_02032 0.81 -0.5 2,125,873 - MPMX20_02032 0.85 -0.8 2,125,949 - -0.7 2,126,051 - -1.5 2,126,071 + -1.2 2,126,159 - -0.5 2,126,208 + -3.5 2,126,266 + MPMX20_02033 0.15 -1.1 2,126,274 - MPMX20_02033 0.15 +1.0 2,126,276 + MPMX20_02033 0.16 -0.9 2,126,292 + MPMX20_02033 0.17 -0.4 2,126,432 - MPMX20_02033 0.32 +0.9 2,126,432 - MPMX20_02033 0.32 -0.8 2,126,443 + MPMX20_02033 0.33 -0.4 2,126,446 - MPMX20_02033 0.34 +4.4 2,126,488 + MPMX20_02033 0.38 -0.6 2,126,512 - MPMX20_02033 0.40 +0.7 2,126,513 + MPMX20_02033 0.41 -0.8 2,126,519 - MPMX20_02033 0.41 +1.1 2,126,637 + MPMX20_02033 0.54 +0.6 2,126,645 - MPMX20_02033 0.54 -2.0 2,126,693 + MPMX20_02033 0.60 -0.7 2,126,741 + MPMX20_02033 0.65 -1.5 2,126,755 - MPMX20_02033 0.66 -0.7 2,126,756 - MPMX20_02033 0.66 -0.1 2,126,800 + MPMX20_02033 0.71 -0.0 2,126,802 - MPMX20_02033 0.71 -1.9 2,126,845 + MPMX20_02033 0.75 -2.8 2,126,853 - MPMX20_02033 0.76 +0.4 2,126,862 + MPMX20_02033 0.77 -0.6 2,126,898 - MPMX20_02033 0.81 -0.4 2,126,898 - MPMX20_02033 0.81 +0.8 2,126,898 - MPMX20_02033 0.81 +0.1 2,126,936 + MPMX20_02033 0.85 -0.1 2,126,957 - MPMX20_02033 0.87 +1.2 2,127,012 + -0.4 2,127,020 - +0.5 2,127,035 + -1.5 2,127,035 + +0.1 2,127,038 - -0.3 2,127,043 - -0.3 2,127,086 + -0.1 2,127,086 + -0.3 2,127,086 + +0.7 2,127,093 + -1.8 2,127,093 + -1.4 2,127,094 - +1.6 2,127,094 - -2.7 2,127,094 - +0.3 2,127,094 - -2.0 2,127,094 - -0.3 2,127,094 - +0.1 2,127,094 - -2.0 2,127,096 - -0.0 2,127,103 - -1.6 2,127,202 + -1.4 2,127,217 + MPMX20_02034 0.15 -2.1 2,127,228 + MPMX20_02034 0.21 -1.9 2,127,306 - MPMX20_02034 0.61 -0.8 2,127,311 - MPMX20_02034 0.63 -1.4 2,127,313 + MPMX20_02034 0.64 -0.6 2,127,313 + MPMX20_02034 0.64 +0.2 2,127,313 + MPMX20_02034 0.64 +2.0 2,127,329 + MPMX20_02034 0.72 +0.6 2,127,382 + +0.3 2,127,415 + +1.0 2,127,423 - -0.3 2,127,522 - +3.8 2,127,654 + MPMX20_02035 0.18 -0.7 2,127,654 + MPMX20_02035 0.18 +0.1 2,127,662 - MPMX20_02035 0.19 -2.3 2,127,662 - MPMX20_02035 0.19 -1.0 2,127,812 + MPMX20_02035 0.39 -3.7 2,127,820 - MPMX20_02035 0.40 +0.7 2,127,935 - MPMX20_02035 0.56 +0.3 2,127,948 + MPMX20_02035 0.57 -3.2 2,127,998 + MPMX20_02035 0.64 -1.6 2,128,006 - MPMX20_02035 0.65 -1.1 2,128,016 - MPMX20_02035 0.66 -0.1 2,128,028 - MPMX20_02035 0.68 +2.8 2,128,064 - MPMX20_02035 0.73 -0.8 2,128,064 - MPMX20_02035 0.73 -0.6
Or see this region's nucleotide sequence