Experiment: Putrescine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00563 and MPMX20_00564 are separated by 528 nucleotides MPMX20_00564 and MPMX20_00565 are separated by 49 nucleotides MPMX20_00565 and MPMX20_00566 are separated by 1 nucleotides
MPMX20_00563: MPMX20_00563 - hypothetical protein, at 587,483 to 588,094
_00563
MPMX20_00564: MPMX20_00564 - hypothetical protein, at 588,623 to 588,919
_00564
MPMX20_00565: MPMX20_00565 - Cardiolipin synthase A, at 588,969 to 589,730
_00565
MPMX20_00566: MPMX20_00566 - hypothetical protein, at 589,732 to 591,594
_00566
Position (kb) 588
589
590 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 588.015 kb on + strand, within MPMX20_00563 at 588.711 kb on - strand, within MPMX20_00564 at 589.322 kb on - strand, within MPMX20_00565 at 589.403 kb on - strand, within MPMX20_00565 at 589.436 kb on - strand, within MPMX20_00565 at 589.436 kb on - strand, within MPMX20_00565 at 589.442 kb on - strand, within MPMX20_00565 at 589.448 kb on - strand, within MPMX20_00565 at 589.453 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.458 kb on - strand, within MPMX20_00565 at 589.461 kb on - strand, within MPMX20_00565 at 589.515 kb on - strand, within MPMX20_00565 at 589.527 kb on - strand, within MPMX20_00565 at 589.527 kb on - strand, within MPMX20_00565 at 589.527 kb on - strand, within MPMX20_00565 at 589.537 kb on - strand, within MPMX20_00565 at 589.537 kb on - strand, within MPMX20_00565 at 589.537 kb on - strand, within MPMX20_00565 at 589.542 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.569 kb on - strand, within MPMX20_00565 at 589.605 kb on - strand, within MPMX20_00565 at 589.610 kb on - strand, within MPMX20_00565 at 589.617 kb on - strand, within MPMX20_00565 at 589.617 kb on - strand, within MPMX20_00565 at 589.617 kb on - strand, within MPMX20_00565 at 589.628 kb on - strand, within MPMX20_00565 at 589.658 kb on - strand at 589.728 kb on - strand at 589.728 kb on - strand at 589.738 kb on - strand at 589.740 kb on - strand at 589.747 kb on - strand at 589.747 kb on - strand at 589.765 kb on - strand at 589.770 kb on - strand at 589.770 kb on - strand at 589.770 kb on - strand at 589.770 kb on - strand at 589.770 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.772 kb on - strand at 589.804 kb on - strand at 589.804 kb on - strand at 589.804 kb on - strand at 589.804 kb on - strand at 589.804 kb on - strand at 589.804 kb on - strand at 589.810 kb on - strand at 589.830 kb on - strand at 589.843 kb on - strand at 589.855 kb on - strand at 589.864 kb on - strand at 589.878 kb on + strand at 589.890 kb on + strand at 589.890 kb on + strand at 589.890 kb on + strand at 589.890 kb on + strand at 589.893 kb on - strand at 589.898 kb on - strand at 589.898 kb on - strand at 589.905 kb on + strand at 589.910 kb on - strand at 589.930 kb on + strand, within MPMX20_00566 at 589.938 kb on - strand, within MPMX20_00566 at 589.952 kb on - strand, within MPMX20_00566 at 589.988 kb on - strand, within MPMX20_00566 at 590.000 kb on - strand, within MPMX20_00566 at 590.016 kb on + strand, within MPMX20_00566 at 590.021 kb on + strand, within MPMX20_00566 at 590.021 kb on + strand, within MPMX20_00566 at 590.021 kb on + strand, within MPMX20_00566 at 590.029 kb on - strand, within MPMX20_00566 at 590.029 kb on - strand, within MPMX20_00566 at 590.029 kb on - strand, within MPMX20_00566 at 590.031 kb on + strand, within MPMX20_00566 at 590.034 kb on - strand, within MPMX20_00566 at 590.039 kb on + strand, within MPMX20_00566 at 590.039 kb on + strand, within MPMX20_00566 at 590.039 kb on + strand, within MPMX20_00566 at 590.039 kb on + strand, within MPMX20_00566 at 590.039 kb on - strand, within MPMX20_00566 at 590.039 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.047 kb on - strand, within MPMX20_00566 at 590.066 kb on + strand, within MPMX20_00566 at 590.093 kb on - strand, within MPMX20_00566 at 590.134 kb on + strand, within MPMX20_00566 at 590.134 kb on + strand, within MPMX20_00566 at 590.141 kb on + strand, within MPMX20_00566 at 590.142 kb on - strand, within MPMX20_00566 at 590.142 kb on - strand, within MPMX20_00566 at 590.142 kb on - strand, within MPMX20_00566 at 590.142 kb on - strand, within MPMX20_00566 at 590.144 kb on + strand, within MPMX20_00566 at 590.144 kb on + strand, within MPMX20_00566 at 590.144 kb on + strand, within MPMX20_00566 at 590.152 kb on - strand, within MPMX20_00566 at 590.154 kb on - strand, within MPMX20_00566 at 590.189 kb on - strand, within MPMX20_00566 at 590.220 kb on + strand, within MPMX20_00566 at 590.228 kb on - strand, within MPMX20_00566 at 590.233 kb on - strand, within MPMX20_00566 at 590.266 kb on + strand, within MPMX20_00566 at 590.274 kb on - strand, within MPMX20_00566 at 590.274 kb on - strand, within MPMX20_00566 at 590.319 kb on + strand, within MPMX20_00566 at 590.327 kb on - strand, within MPMX20_00566 at 590.327 kb on - strand, within MPMX20_00566 at 590.329 kb on + strand, within MPMX20_00566 at 590.329 kb on + strand, within MPMX20_00566 at 590.337 kb on - strand, within MPMX20_00566 at 590.337 kb on - strand, within MPMX20_00566 at 590.337 kb on - strand, within MPMX20_00566 at 590.337 kb on - strand, within MPMX20_00566 at 590.340 kb on + strand, within MPMX20_00566 at 590.340 kb on + strand, within MPMX20_00566 at 590.345 kb on + strand, within MPMX20_00566 at 590.353 kb on - strand, within MPMX20_00566 at 590.353 kb on - strand, within MPMX20_00566 at 590.419 kb on + strand, within MPMX20_00566 at 590.448 kb on - strand, within MPMX20_00566 at 590.453 kb on - strand, within MPMX20_00566 at 590.501 kb on + strand, within MPMX20_00566 at 590.501 kb on + strand, within MPMX20_00566 at 590.507 kb on - strand, within MPMX20_00566 at 590.509 kb on + strand, within MPMX20_00566 at 590.509 kb on - strand, within MPMX20_00566 at 590.509 kb on - strand, within MPMX20_00566 at 590.509 kb on - strand, within MPMX20_00566 at 590.509 kb on - strand, within MPMX20_00566 at 590.523 kb on + strand, within MPMX20_00566 at 590.531 kb on - strand, within MPMX20_00566 at 590.571 kb on - strand, within MPMX20_00566 at 590.577 kb on - strand, within MPMX20_00566 at 590.671 kb on + strand, within MPMX20_00566 at 590.671 kb on + strand, within MPMX20_00566 at 590.671 kb on + strand, within MPMX20_00566 at 590.679 kb on - strand, within MPMX20_00566 at 590.679 kb on - strand, within MPMX20_00566 at 590.695 kb on - strand, within MPMX20_00566 at 590.711 kb on + strand, within MPMX20_00566 at 590.711 kb on + strand, within MPMX20_00566 at 590.718 kb on + strand, within MPMX20_00566 at 590.718 kb on + strand, within MPMX20_00566 at 590.718 kb on + strand, within MPMX20_00566 at 590.718 kb on + strand, within MPMX20_00566 at 590.723 kb on + strand, within MPMX20_00566
Per-strain Table
Position Strand Gene LocusTag Fraction Putrescine (C) remove 588,015 + MPMX20_00563 0.87 -1.0 588,711 - MPMX20_00564 0.30 -1.6 589,322 - MPMX20_00565 0.46 -2.4 589,403 - MPMX20_00565 0.57 -1.5 589,436 - MPMX20_00565 0.61 +1.6 589,436 - MPMX20_00565 0.61 -1.3 589,442 - MPMX20_00565 0.62 -1.4 589,448 - MPMX20_00565 0.63 -1.0 589,453 - MPMX20_00565 0.64 -2.8 589,458 - MPMX20_00565 0.64 -2.0 589,458 - MPMX20_00565 0.64 -1.1 589,458 - MPMX20_00565 0.64 +0.8 589,458 - MPMX20_00565 0.64 -2.6 589,458 - MPMX20_00565 0.64 -0.5 589,458 - MPMX20_00565 0.64 +1.6 589,458 - MPMX20_00565 0.64 -2.8 589,458 - MPMX20_00565 0.64 -1.0 589,458 - MPMX20_00565 0.64 +0.4 589,458 - MPMX20_00565 0.64 -1.0 589,458 - MPMX20_00565 0.64 -1.1 589,458 - MPMX20_00565 0.64 -1.2 589,458 - MPMX20_00565 0.64 +0.8 589,458 - MPMX20_00565 0.64 +2.0 589,458 - MPMX20_00565 0.64 -1.6 589,458 - MPMX20_00565 0.64 -0.8 589,458 - MPMX20_00565 0.64 -2.6 589,458 - MPMX20_00565 0.64 -4.4 589,458 - MPMX20_00565 0.64 -1.5 589,458 - MPMX20_00565 0.64 -1.8 589,458 - MPMX20_00565 0.64 -1.0 589,458 - MPMX20_00565 0.64 -1.2 589,461 - MPMX20_00565 0.65 -1.8 589,515 - MPMX20_00565 0.72 -3.5 589,527 - MPMX20_00565 0.73 +0.0 589,527 - MPMX20_00565 0.73 -0.5 589,527 - MPMX20_00565 0.73 +1.2 589,537 - MPMX20_00565 0.75 -1.0 589,537 - MPMX20_00565 0.75 -0.6 589,537 - MPMX20_00565 0.75 -0.9 589,542 - MPMX20_00565 0.75 +0.8 589,569 - MPMX20_00565 0.79 -1.3 589,569 - MPMX20_00565 0.79 -0.9 589,569 - MPMX20_00565 0.79 -0.6 589,569 - MPMX20_00565 0.79 -1.0 589,569 - MPMX20_00565 0.79 +0.4 589,569 - MPMX20_00565 0.79 -0.6 589,569 - MPMX20_00565 0.79 -1.8 589,569 - MPMX20_00565 0.79 -1.9 589,569 - MPMX20_00565 0.79 -1.6 589,569 - MPMX20_00565 0.79 -2.9 589,569 - MPMX20_00565 0.79 -0.5 589,569 - MPMX20_00565 0.79 -1.1 589,569 - MPMX20_00565 0.79 -1.6 589,569 - MPMX20_00565 0.79 -2.1 589,569 - MPMX20_00565 0.79 -1.3 589,569 - MPMX20_00565 0.79 +0.0 589,569 - MPMX20_00565 0.79 -1.0 589,569 - MPMX20_00565 0.79 +2.9 589,569 - MPMX20_00565 0.79 -2.0 589,605 - MPMX20_00565 0.83 -2.3 589,610 - MPMX20_00565 0.84 +1.6 589,617 - MPMX20_00565 0.85 -2.5 589,617 - MPMX20_00565 0.85 -1.5 589,617 - MPMX20_00565 0.85 +0.9 589,628 - MPMX20_00565 0.86 +1.7 589,658 - +0.3 589,728 - +0.5 589,728 - -1.9 589,738 - +0.2 589,740 - +1.7 589,747 - -2.0 589,747 - -0.7 589,765 - -3.5 589,770 - -1.8 589,770 - +0.1 589,770 - +2.9 589,770 - +0.7 589,770 - -0.2 589,772 - -0.1 589,772 - -0.8 589,772 - -1.8 589,772 - +0.4 589,772 - +0.5 589,772 - +2.5 589,772 - +1.4 589,772 - -0.6 589,772 - +0.3 589,772 - -0.4 589,772 - +3.0 589,772 - -2.9 589,772 - -2.9 589,772 - +1.8 589,772 - -0.5 589,772 - -0.1 589,772 - -3.3 589,772 - +0.2 589,772 - +1.2 589,772 - +2.6 589,772 - +2.4 589,772 - -1.6 589,772 - -0.6 589,772 - -3.1 589,772 - +1.4 589,772 - -2.3 589,772 - -3.3 589,772 - -0.2 589,772 - +0.3 589,772 - +1.5 589,772 - -0.5 589,772 - +0.6 589,772 - +1.4 589,772 - -1.7 589,772 - -3.9 589,772 - -2.9 589,772 - -2.6 589,772 - -0.5 589,772 - +1.9 589,772 - -4.1 589,772 - -0.7 589,772 - +0.2 589,772 - +1.2 589,772 - +0.8 589,772 - -0.2 589,772 - +1.2 589,772 - +1.0 589,772 - -0.3 589,772 - +0.6 589,772 - -0.1 589,772 - -1.6 589,772 - +0.4 589,804 - -2.0 589,804 - +0.3 589,804 - -4.0 589,804 - -1.2 589,804 - -0.5 589,804 - -2.4 589,810 - +0.4 589,830 - -0.5 589,843 - -3.3 589,855 - -0.4 589,864 - -1.2 589,878 + -0.7 589,890 + -3.2 589,890 + +1.4 589,890 + +2.1 589,890 + -1.9 589,893 - -0.1 589,898 - +0.4 589,898 - +0.0 589,905 + +1.4 589,910 - +0.2 589,930 + MPMX20_00566 0.11 -3.1 589,938 - MPMX20_00566 0.11 -0.2 589,952 - MPMX20_00566 0.12 +0.6 589,988 - MPMX20_00566 0.14 +0.0 590,000 - MPMX20_00566 0.14 +1.5 590,016 + MPMX20_00566 0.15 -2.6 590,021 + MPMX20_00566 0.16 -1.4 590,021 + MPMX20_00566 0.16 +0.9 590,021 + MPMX20_00566 0.16 +0.7 590,029 - MPMX20_00566 0.16 -0.6 590,029 - MPMX20_00566 0.16 -2.3 590,029 - MPMX20_00566 0.16 -0.5 590,031 + MPMX20_00566 0.16 -3.0 590,034 - MPMX20_00566 0.16 +1.1 590,039 + MPMX20_00566 0.16 +1.4 590,039 + MPMX20_00566 0.16 -1.2 590,039 + MPMX20_00566 0.16 -2.6 590,039 + MPMX20_00566 0.16 +0.4 590,039 - MPMX20_00566 0.16 +0.4 590,039 - MPMX20_00566 0.16 -4.0 590,047 - MPMX20_00566 0.17 +0.4 590,047 - MPMX20_00566 0.17 +0.9 590,047 - MPMX20_00566 0.17 -1.6 590,047 - MPMX20_00566 0.17 +0.3 590,047 - MPMX20_00566 0.17 +0.7 590,047 - MPMX20_00566 0.17 +2.2 590,047 - MPMX20_00566 0.17 +0.1 590,066 + MPMX20_00566 0.18 -1.8 590,093 - MPMX20_00566 0.19 -1.0 590,134 + MPMX20_00566 0.22 -2.7 590,134 + MPMX20_00566 0.22 +0.5 590,141 + MPMX20_00566 0.22 -3.4 590,142 - MPMX20_00566 0.22 +0.0 590,142 - MPMX20_00566 0.22 +0.5 590,142 - MPMX20_00566 0.22 +1.3 590,142 - MPMX20_00566 0.22 +2.3 590,144 + MPMX20_00566 0.22 +1.4 590,144 + MPMX20_00566 0.22 +1.9 590,144 + MPMX20_00566 0.22 +1.1 590,152 - MPMX20_00566 0.23 +0.4 590,154 - MPMX20_00566 0.23 -1.2 590,189 - MPMX20_00566 0.25 +1.8 590,220 + MPMX20_00566 0.26 +0.2 590,228 - MPMX20_00566 0.27 -0.2 590,233 - MPMX20_00566 0.27 -0.8 590,266 + MPMX20_00566 0.29 +0.8 590,274 - MPMX20_00566 0.29 -1.5 590,274 - MPMX20_00566 0.29 +0.7 590,319 + MPMX20_00566 0.32 -0.8 590,327 - MPMX20_00566 0.32 -2.0 590,327 - MPMX20_00566 0.32 +0.4 590,329 + MPMX20_00566 0.32 -0.9 590,329 + MPMX20_00566 0.32 -2.0 590,337 - MPMX20_00566 0.32 +0.4 590,337 - MPMX20_00566 0.32 +0.9 590,337 - MPMX20_00566 0.32 +1.4 590,337 - MPMX20_00566 0.32 +1.0 590,340 + MPMX20_00566 0.33 +0.4 590,340 + MPMX20_00566 0.33 -0.1 590,345 + MPMX20_00566 0.33 +1.0 590,353 - MPMX20_00566 0.33 -0.2 590,353 - MPMX20_00566 0.33 +0.9 590,419 + MPMX20_00566 0.37 -1.2 590,448 - MPMX20_00566 0.38 -1.2 590,453 - MPMX20_00566 0.39 -1.9 590,501 + MPMX20_00566 0.41 +1.5 590,501 + MPMX20_00566 0.41 -4.1 590,507 - MPMX20_00566 0.42 -0.2 590,509 + MPMX20_00566 0.42 -2.0 590,509 - MPMX20_00566 0.42 +1.0 590,509 - MPMX20_00566 0.42 -0.1 590,509 - MPMX20_00566 0.42 +0.9 590,509 - MPMX20_00566 0.42 +0.4 590,523 + MPMX20_00566 0.42 -0.7 590,531 - MPMX20_00566 0.43 +1.1 590,571 - MPMX20_00566 0.45 +2.4 590,577 - MPMX20_00566 0.45 +0.9 590,671 + MPMX20_00566 0.50 +1.3 590,671 + MPMX20_00566 0.50 +0.4 590,671 + MPMX20_00566 0.50 +0.8 590,679 - MPMX20_00566 0.51 -1.2 590,679 - MPMX20_00566 0.51 +0.0 590,695 - MPMX20_00566 0.52 +0.0 590,711 + MPMX20_00566 0.53 +1.2 590,711 + MPMX20_00566 0.53 -2.8 590,718 + MPMX20_00566 0.53 +2.8 590,718 + MPMX20_00566 0.53 +0.5 590,718 + MPMX20_00566 0.53 +0.7 590,718 + MPMX20_00566 0.53 +0.1 590,723 + MPMX20_00566 0.53 +0.0
Or see this region's nucleotide sequence