Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00733

Experiment: Carnitine Hydrochloride (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00731 and MPMX20_00732 are separated by 26 nucleotidesMPMX20_00732 and MPMX20_00733 overlap by 1 nucleotidesMPMX20_00733 and MPMX20_00734 are separated by 10 nucleotidesMPMX20_00734 and MPMX20_00735 are separated by 9 nucleotidesMPMX20_00735 and MPMX20_00736 are separated by 2 nucleotides MPMX20_00731: MPMX20_00731 - hypothetical protein, at 755,439 to 756,209 _00731 MPMX20_00732: MPMX20_00732 - PTS system mannose-specific EIID component, at 756,236 to 757,054 _00732 MPMX20_00733: MPMX20_00733 - PTS system sorbose-specific EIIC component, at 757,054 to 757,851 _00733 MPMX20_00734: MPMX20_00734 - PTS system fructose-specific EIIB component, at 757,862 to 758,356 _00734 MPMX20_00735: MPMX20_00735 - hypothetical protein, at 758,366 to 758,794 _00735 MPMX20_00736: MPMX20_00736 - hypothetical protein, at 758,797 to 760,539 _00736 Position (kb) 757 758Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 756.063 kb on + strand, within MPMX20_00731at 756.305 kb on - strandat 756.331 kb on + strand, within MPMX20_00732at 756.349 kb on - strand, within MPMX20_00732at 756.408 kb on - strand, within MPMX20_00732at 756.441 kb on + strand, within MPMX20_00732at 756.448 kb on + strand, within MPMX20_00732at 756.448 kb on + strand, within MPMX20_00732at 756.448 kb on + strand, within MPMX20_00732at 756.459 kb on - strand, within MPMX20_00732at 756.481 kb on + strand, within MPMX20_00732at 756.505 kb on - strand, within MPMX20_00732at 756.514 kb on + strand, within MPMX20_00732at 756.558 kb on - strand, within MPMX20_00732at 756.558 kb on - strand, within MPMX20_00732at 756.624 kb on + strand, within MPMX20_00732at 756.624 kb on + strand, within MPMX20_00732at 756.624 kb on + strand, within MPMX20_00732at 756.624 kb on + strand, within MPMX20_00732at 756.632 kb on - strand, within MPMX20_00732at 756.632 kb on - strand, within MPMX20_00732at 756.632 kb on - strand, within MPMX20_00732at 756.767 kb on - strand, within MPMX20_00732at 756.789 kb on + strand, within MPMX20_00732at 756.825 kb on - strand, within MPMX20_00732at 756.825 kb on - strand, within MPMX20_00732at 756.903 kb on - strand, within MPMX20_00732at 756.943 kb on + strand, within MPMX20_00732at 756.967 kb on + strand, within MPMX20_00732at 756.988 kb on + strandat 757.039 kb on + strandat 757.079 kb on + strandat 757.079 kb on + strandat 757.087 kb on - strandat 757.248 kb on - strand, within MPMX20_00733at 757.285 kb on + strand, within MPMX20_00733at 757.350 kb on - strand, within MPMX20_00733at 757.375 kb on - strand, within MPMX20_00733at 757.387 kb on + strand, within MPMX20_00733at 757.498 kb on - strand, within MPMX20_00733at 757.500 kb on - strand, within MPMX20_00733at 757.508 kb on + strand, within MPMX20_00733at 757.516 kb on - strand, within MPMX20_00733at 757.516 kb on - strand, within MPMX20_00733at 757.563 kb on + strand, within MPMX20_00733at 757.612 kb on - strand, within MPMX20_00733at 757.724 kb on - strand, within MPMX20_00733at 757.801 kb on - strandat 757.814 kb on + strandat 757.814 kb on + strandat 757.823 kb on + strandat 757.937 kb on + strand, within MPMX20_00734at 757.945 kb on - strand, within MPMX20_00734at 757.963 kb on - strand, within MPMX20_00734at 757.963 kb on - strand, within MPMX20_00734at 757.963 kb on - strand, within MPMX20_00734at 757.970 kb on - strand, within MPMX20_00734at 757.990 kb on + strand, within MPMX20_00734at 757.998 kb on - strand, within MPMX20_00734at 757.998 kb on - strand, within MPMX20_00734at 758.004 kb on + strand, within MPMX20_00734at 758.010 kb on + strand, within MPMX20_00734at 758.065 kb on + strand, within MPMX20_00734at 758.073 kb on - strand, within MPMX20_00734at 758.088 kb on - strand, within MPMX20_00734at 758.097 kb on - strand, within MPMX20_00734at 758.129 kb on - strand, within MPMX20_00734at 758.129 kb on - strand, within MPMX20_00734at 758.175 kb on + strand, within MPMX20_00734at 758.183 kb on - strand, within MPMX20_00734at 758.185 kb on + strand, within MPMX20_00734at 758.185 kb on + strand, within MPMX20_00734at 758.206 kb on - strand, within MPMX20_00734at 758.295 kb on - strand, within MPMX20_00734at 758.311 kb on + strandat 758.354 kb on + strandat 758.362 kb on - strandat 758.408 kb on + strandat 758.413 kb on + strand, within MPMX20_00735at 758.578 kb on + strand, within MPMX20_00735at 758.644 kb on - strand, within MPMX20_00735at 758.668 kb on - strand, within MPMX20_00735at 758.681 kb on - strand, within MPMX20_00735at 758.800 kb on + strandat 758.809 kb on - strandat 758.809 kb on - strandat 758.812 kb on + strandat 758.812 kb on + strandat 758.842 kb on + strandat 758.850 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Carnitine Hydrochloride (C)
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756,063 + MPMX20_00731 0.81 -2.1
756,305 - -2.8
756,331 + MPMX20_00732 0.12 +4.4
756,349 - MPMX20_00732 0.14 -0.7
756,408 - MPMX20_00732 0.21 +0.3
756,441 + MPMX20_00732 0.25 +1.1
756,448 + MPMX20_00732 0.26 +1.0
756,448 + MPMX20_00732 0.26 +2.4
756,448 + MPMX20_00732 0.26 +2.5
756,459 - MPMX20_00732 0.27 +1.9
756,481 + MPMX20_00732 0.30 +1.2
756,505 - MPMX20_00732 0.33 +0.3
756,514 + MPMX20_00732 0.34 -1.9
756,558 - MPMX20_00732 0.39 +4.9
756,558 - MPMX20_00732 0.39 +0.7
756,624 + MPMX20_00732 0.47 -2.5
756,624 + MPMX20_00732 0.47 +0.3
756,624 + MPMX20_00732 0.47 -0.9
756,624 + MPMX20_00732 0.47 +1.0
756,632 - MPMX20_00732 0.48 +0.3
756,632 - MPMX20_00732 0.48 +1.2
756,632 - MPMX20_00732 0.48 +1.4
756,767 - MPMX20_00732 0.65 -1.9
756,789 + MPMX20_00732 0.68 -1.6
756,825 - MPMX20_00732 0.72 +0.9
756,825 - MPMX20_00732 0.72 -1.2
756,903 - MPMX20_00732 0.81 -1.3
756,943 + MPMX20_00732 0.86 +2.3
756,967 + MPMX20_00732 0.89 -0.7
756,988 + +1.4
757,039 + -2.6
757,079 + +0.7
757,079 + +1.8
757,087 - -0.2
757,248 - MPMX20_00733 0.24 -0.3
757,285 + MPMX20_00733 0.29 -2.6
757,350 - MPMX20_00733 0.37 -1.6
757,375 - MPMX20_00733 0.40 +0.3
757,387 + MPMX20_00733 0.42 -4.2
757,498 - MPMX20_00733 0.56 +0.8
757,500 - MPMX20_00733 0.56 -1.1
757,508 + MPMX20_00733 0.57 +2.0
757,516 - MPMX20_00733 0.58 +0.2
757,516 - MPMX20_00733 0.58 +1.6
757,563 + MPMX20_00733 0.64 -3.8
757,612 - MPMX20_00733 0.70 +2.1
757,724 - MPMX20_00733 0.84 +0.8
757,801 - -1.1
757,814 + +0.9
757,814 + +0.7
757,823 + +0.1
757,937 + MPMX20_00734 0.15 -4.2
757,945 - MPMX20_00734 0.17 -3.3
757,963 - MPMX20_00734 0.20 +1.8
757,963 - MPMX20_00734 0.20 -0.5
757,963 - MPMX20_00734 0.20 +1.1
757,970 - MPMX20_00734 0.22 +0.4
757,990 + MPMX20_00734 0.26 +1.4
757,998 - MPMX20_00734 0.27 +0.9
757,998 - MPMX20_00734 0.27 +3.3
758,004 + MPMX20_00734 0.29 -0.6
758,010 + MPMX20_00734 0.30 -1.8
758,065 + MPMX20_00734 0.41 -1.0
758,073 - MPMX20_00734 0.43 +1.4
758,088 - MPMX20_00734 0.46 -1.7
758,097 - MPMX20_00734 0.47 -0.6
758,129 - MPMX20_00734 0.54 +0.9
758,129 - MPMX20_00734 0.54 +0.6
758,175 + MPMX20_00734 0.63 +0.8
758,183 - MPMX20_00734 0.65 +0.7
758,185 + MPMX20_00734 0.65 +2.6
758,185 + MPMX20_00734 0.65 +0.9
758,206 - MPMX20_00734 0.69 +0.6
758,295 - MPMX20_00734 0.87 +0.0
758,311 + +1.1
758,354 + +0.8
758,362 - -1.7
758,408 + -3.8
758,413 + MPMX20_00735 0.11 -0.5
758,578 + MPMX20_00735 0.49 -0.5
758,644 - MPMX20_00735 0.65 -0.6
758,668 - MPMX20_00735 0.70 -1.6
758,681 - MPMX20_00735 0.73 -1.2
758,800 + -0.1
758,809 - +0.7
758,809 - -0.9
758,812 + -0.0
758,812 + +1.0
758,842 + +0.2
758,850 - -0.1

Or see this region's nucleotide sequence