Experiment: L-Citrulline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02976 and MPMX20_02977 overlap by 4 nucleotides MPMX20_02977 and MPMX20_02978 are separated by 26 nucleotides
MPMX20_02976: MPMX20_02976 - Aerobactin synthase, at 3,108,129 to 3,109,871
_02976
MPMX20_02977: MPMX20_02977 - L-lysine N6-monooxygenase, at 3,109,868 to 3,111,193
_02977
MPMX20_02978: MPMX20_02978 - Ferric aerobactin receptor, at 3,111,220 to 3,113,409
_02978
Position (kb)
3109
3110
3111
3112 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3108.911 kb on + strand, within MPMX20_02976 at 3108.998 kb on + strand, within MPMX20_02976 at 3109.030 kb on + strand, within MPMX20_02976 at 3109.038 kb on - strand, within MPMX20_02976 at 3109.038 kb on - strand, within MPMX20_02976 at 3109.038 kb on - strand, within MPMX20_02976 at 3109.043 kb on - strand, within MPMX20_02976 at 3109.080 kb on - strand, within MPMX20_02976 at 3109.126 kb on + strand, within MPMX20_02976 at 3109.129 kb on - strand, within MPMX20_02976 at 3109.144 kb on - strand, within MPMX20_02976 at 3109.153 kb on - strand, within MPMX20_02976 at 3109.171 kb on + strand, within MPMX20_02976 at 3109.203 kb on + strand, within MPMX20_02976 at 3109.211 kb on + strand, within MPMX20_02976 at 3109.219 kb on - strand, within MPMX20_02976 at 3109.226 kb on + strand, within MPMX20_02976 at 3109.226 kb on + strand, within MPMX20_02976 at 3109.412 kb on + strand, within MPMX20_02976 at 3109.507 kb on + strand, within MPMX20_02976 at 3109.515 kb on - strand, within MPMX20_02976 at 3109.517 kb on + strand, within MPMX20_02976 at 3109.517 kb on + strand, within MPMX20_02976 at 3109.523 kb on - strand, within MPMX20_02976 at 3109.525 kb on - strand, within MPMX20_02976 at 3109.525 kb on - strand, within MPMX20_02976 at 3109.551 kb on - strand, within MPMX20_02976 at 3109.592 kb on + strand, within MPMX20_02976 at 3109.610 kb on + strand, within MPMX20_02976 at 3109.652 kb on + strand, within MPMX20_02976 at 3109.676 kb on + strand, within MPMX20_02976 at 3109.676 kb on + strand, within MPMX20_02976 at 3109.676 kb on + strand, within MPMX20_02976 at 3109.716 kb on - strand at 3109.754 kb on + strand at 3109.777 kb on + strand at 3109.851 kb on + strand at 3109.903 kb on - strand at 3109.955 kb on - strand at 3110.005 kb on - strand, within MPMX20_02977 at 3110.016 kb on + strand, within MPMX20_02977 at 3110.055 kb on + strand, within MPMX20_02977 at 3110.091 kb on + strand, within MPMX20_02977 at 3110.091 kb on + strand, within MPMX20_02977 at 3110.127 kb on + strand, within MPMX20_02977 at 3110.137 kb on + strand, within MPMX20_02977 at 3110.137 kb on + strand, within MPMX20_02977 at 3110.137 kb on + strand, within MPMX20_02977 at 3110.218 kb on + strand, within MPMX20_02977 at 3110.218 kb on + strand, within MPMX20_02977 at 3110.320 kb on + strand, within MPMX20_02977 at 3110.361 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.432 kb on + strand, within MPMX20_02977 at 3110.440 kb on - strand, within MPMX20_02977 at 3110.440 kb on - strand, within MPMX20_02977 at 3110.440 kb on - strand, within MPMX20_02977 at 3110.442 kb on + strand, within MPMX20_02977 at 3110.533 kb on + strand, within MPMX20_02977 at 3110.594 kb on - strand, within MPMX20_02977 at 3110.648 kb on - strand, within MPMX20_02977 at 3110.648 kb on - strand, within MPMX20_02977 at 3110.648 kb on - strand, within MPMX20_02977 at 3110.731 kb on + strand, within MPMX20_02977 at 3110.731 kb on + strand, within MPMX20_02977 at 3110.731 kb on + strand, within MPMX20_02977 at 3110.895 kb on + strand, within MPMX20_02977 at 3110.896 kb on - strand, within MPMX20_02977 at 3110.973 kb on + strand, within MPMX20_02977 at 3111.009 kb on + strand, within MPMX20_02977 at 3111.026 kb on + strand, within MPMX20_02977 at 3111.034 kb on - strand, within MPMX20_02977 at 3111.034 kb on - strand, within MPMX20_02977 at 3111.062 kb on + strand at 3111.108 kb on - strand at 3111.116 kb on - strand at 3111.135 kb on - strand at 3111.195 kb on - strand at 3111.218 kb on - strand at 3111.276 kb on - strand at 3111.336 kb on + strand at 3111.341 kb on + strand at 3111.370 kb on - strand at 3111.400 kb on + strand at 3111.407 kb on - strand at 3111.427 kb on + strand at 3111.435 kb on - strand at 3111.457 kb on - strand, within MPMX20_02978 at 3111.485 kb on + strand, within MPMX20_02978 at 3111.485 kb on + strand, within MPMX20_02978 at 3111.493 kb on - strand, within MPMX20_02978 at 3111.582 kb on + strand, within MPMX20_02978 at 3111.595 kb on - strand, within MPMX20_02978 at 3111.595 kb on - strand, within MPMX20_02978 at 3111.689 kb on - strand, within MPMX20_02978 at 3111.796 kb on - strand, within MPMX20_02978 at 3111.806 kb on - strand, within MPMX20_02978 at 3111.824 kb on - strand, within MPMX20_02978 at 3111.863 kb on + strand, within MPMX20_02978 at 3111.881 kb on - strand, within MPMX20_02978 at 3111.896 kb on + strand, within MPMX20_02978 at 3111.903 kb on - strand, within MPMX20_02978 at 3111.914 kb on - strand, within MPMX20_02978 at 3111.966 kb on - strand, within MPMX20_02978 at 3112.032 kb on - strand, within MPMX20_02978 at 3112.032 kb on - strand, within MPMX20_02978 at 3112.077 kb on + strand, within MPMX20_02978 at 3112.098 kb on + strand, within MPMX20_02978 at 3112.105 kb on - strand, within MPMX20_02978 at 3112.105 kb on - strand, within MPMX20_02978
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (C) remove 3,108,911 + MPMX20_02976 0.45 -2.3 3,108,998 + MPMX20_02976 0.50 -4.1 3,109,030 + MPMX20_02976 0.52 -1.7 3,109,038 - MPMX20_02976 0.52 -3.6 3,109,038 - MPMX20_02976 0.52 +1.6 3,109,038 - MPMX20_02976 0.52 -0.1 3,109,043 - MPMX20_02976 0.52 +0.3 3,109,080 - MPMX20_02976 0.55 -1.3 3,109,126 + MPMX20_02976 0.57 -2.1 3,109,129 - MPMX20_02976 0.57 -3.6 3,109,144 - MPMX20_02976 0.58 +0.8 3,109,153 - MPMX20_02976 0.59 +0.2 3,109,171 + MPMX20_02976 0.60 -0.3 3,109,203 + MPMX20_02976 0.62 +0.3 3,109,211 + MPMX20_02976 0.62 -0.5 3,109,219 - MPMX20_02976 0.63 +0.1 3,109,226 + MPMX20_02976 0.63 +0.4 3,109,226 + MPMX20_02976 0.63 +0.2 3,109,412 + MPMX20_02976 0.74 -0.7 3,109,507 + MPMX20_02976 0.79 +0.3 3,109,515 - MPMX20_02976 0.80 +2.4 3,109,517 + MPMX20_02976 0.80 -0.8 3,109,517 + MPMX20_02976 0.80 +0.5 3,109,523 - MPMX20_02976 0.80 +0.7 3,109,525 - MPMX20_02976 0.80 -2.6 3,109,525 - MPMX20_02976 0.80 +0.6 3,109,551 - MPMX20_02976 0.82 +0.2 3,109,592 + MPMX20_02976 0.84 -4.5 3,109,610 + MPMX20_02976 0.85 -0.9 3,109,652 + MPMX20_02976 0.87 +0.3 3,109,676 + MPMX20_02976 0.89 -0.3 3,109,676 + MPMX20_02976 0.89 +0.9 3,109,676 + MPMX20_02976 0.89 -0.9 3,109,716 - +1.3 3,109,754 + +0.4 3,109,777 + -3.4 3,109,851 + +2.0 3,109,903 - -0.5 3,109,955 - -4.3 3,110,005 - MPMX20_02977 0.10 +0.4 3,110,016 + MPMX20_02977 0.11 -0.9 3,110,055 + MPMX20_02977 0.14 -1.8 3,110,091 + MPMX20_02977 0.17 -1.9 3,110,091 + MPMX20_02977 0.17 -0.6 3,110,127 + MPMX20_02977 0.20 +1.1 3,110,137 + MPMX20_02977 0.20 +0.2 3,110,137 + MPMX20_02977 0.20 +0.3 3,110,137 + MPMX20_02977 0.20 -2.0 3,110,218 + MPMX20_02977 0.26 +1.6 3,110,218 + MPMX20_02977 0.26 -1.1 3,110,320 + MPMX20_02977 0.34 -0.3 3,110,361 + MPMX20_02977 0.37 -2.6 3,110,432 + MPMX20_02977 0.43 +1.4 3,110,432 + MPMX20_02977 0.43 +1.5 3,110,432 + MPMX20_02977 0.43 -0.3 3,110,432 + MPMX20_02977 0.43 -2.5 3,110,432 + MPMX20_02977 0.43 -3.0 3,110,432 + MPMX20_02977 0.43 -0.1 3,110,432 + MPMX20_02977 0.43 -0.4 3,110,440 - MPMX20_02977 0.43 +0.6 3,110,440 - MPMX20_02977 0.43 -1.0 3,110,440 - MPMX20_02977 0.43 -0.1 3,110,442 + MPMX20_02977 0.43 -1.3 3,110,533 + MPMX20_02977 0.50 +0.6 3,110,594 - MPMX20_02977 0.55 -1.3 3,110,648 - MPMX20_02977 0.59 -2.3 3,110,648 - MPMX20_02977 0.59 +1.9 3,110,648 - MPMX20_02977 0.59 +1.1 3,110,731 + MPMX20_02977 0.65 -2.6 3,110,731 + MPMX20_02977 0.65 -2.1 3,110,731 + MPMX20_02977 0.65 -0.4 3,110,895 + MPMX20_02977 0.77 -1.2 3,110,896 - MPMX20_02977 0.78 +0.2 3,110,973 + MPMX20_02977 0.83 +1.1 3,111,009 + MPMX20_02977 0.86 -3.5 3,111,026 + MPMX20_02977 0.87 +1.3 3,111,034 - MPMX20_02977 0.88 -1.6 3,111,034 - MPMX20_02977 0.88 +0.8 3,111,062 + +0.1 3,111,108 - +0.1 3,111,116 - -0.1 3,111,135 - +0.5 3,111,195 - -0.2 3,111,218 - -0.0 3,111,276 - +0.5 3,111,336 + -3.5 3,111,341 + +2.7 3,111,370 - +1.1 3,111,400 + -0.1 3,111,407 - -0.9 3,111,427 + +0.9 3,111,435 - -2.9 3,111,457 - MPMX20_02978 0.11 -1.9 3,111,485 + MPMX20_02978 0.12 -1.6 3,111,485 + MPMX20_02978 0.12 -1.6 3,111,493 - MPMX20_02978 0.12 -1.4 3,111,582 + MPMX20_02978 0.17 -2.6 3,111,595 - MPMX20_02978 0.17 -1.0 3,111,595 - MPMX20_02978 0.17 -0.9 3,111,689 - MPMX20_02978 0.21 -1.6 3,111,796 - MPMX20_02978 0.26 +0.3 3,111,806 - MPMX20_02978 0.27 -1.3 3,111,824 - MPMX20_02978 0.28 -2.0 3,111,863 + MPMX20_02978 0.29 -0.3 3,111,881 - MPMX20_02978 0.30 -1.3 3,111,896 + MPMX20_02978 0.31 +0.6 3,111,903 - MPMX20_02978 0.31 -0.0 3,111,914 - MPMX20_02978 0.32 -0.5 3,111,966 - MPMX20_02978 0.34 +1.2 3,112,032 - MPMX20_02978 0.37 -0.7 3,112,032 - MPMX20_02978 0.37 -0.0 3,112,077 + MPMX20_02978 0.39 -1.2 3,112,098 + MPMX20_02978 0.40 -1.9 3,112,105 - MPMX20_02978 0.40 +0.6 3,112,105 - MPMX20_02978 0.40 -4.3
Or see this region's nucleotide sequence