Experiment: L-Citrulline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02642 and MPMX20_02643 are separated by 124 nucleotides MPMX20_02643 and MPMX20_02644 are separated by 274 nucleotides MPMX20_02644 and MPMX20_02645 are separated by 126 nucleotides
MPMX20_02642: MPMX20_02642 - hypothetical protein, at 2,786,236 to 2,787,294
_02642
MPMX20_02643: MPMX20_02643 - hypothetical protein, at 2,787,419 to 2,787,694
_02643
MPMX20_02644: MPMX20_02644 - Peptidyl-tRNA hydrolase, at 2,787,969 to 2,788,553
_02644
MPMX20_02645: MPMX20_02645 - Ribosome-binding ATPase YchF, at 2,788,680 to 2,789,774
_02645
Position (kb)
2787
2788 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2786.445 kb on - strand, within MPMX20_02642 at 2786.466 kb on + strand, within MPMX20_02642 at 2786.529 kb on + strand, within MPMX20_02642 at 2786.556 kb on - strand, within MPMX20_02642 at 2786.556 kb on - strand, within MPMX20_02642 at 2786.556 kb on - strand, within MPMX20_02642 at 2786.556 kb on - strand, within MPMX20_02642 at 2786.556 kb on - strand, within MPMX20_02642 at 2786.570 kb on - strand, within MPMX20_02642 at 2786.670 kb on + strand, within MPMX20_02642 at 2786.678 kb on - strand, within MPMX20_02642 at 2786.683 kb on - strand, within MPMX20_02642 at 2786.720 kb on + strand, within MPMX20_02642 at 2786.728 kb on - strand, within MPMX20_02642 at 2786.728 kb on - strand, within MPMX20_02642 at 2786.821 kb on + strand, within MPMX20_02642 at 2786.829 kb on - strand, within MPMX20_02642 at 2786.831 kb on + strand, within MPMX20_02642 at 2786.834 kb on - strand, within MPMX20_02642 at 2786.839 kb on - strand, within MPMX20_02642 at 2786.865 kb on - strand, within MPMX20_02642 at 2786.949 kb on - strand, within MPMX20_02642 at 2787.151 kb on + strand, within MPMX20_02642 at 2787.153 kb on - strand, within MPMX20_02642 at 2787.185 kb on - strand, within MPMX20_02642 at 2787.196 kb on - strand at 2787.219 kb on - strand at 2787.230 kb on + strand at 2787.272 kb on + strand at 2787.275 kb on + strand at 2787.290 kb on - strand at 2787.326 kb on + strand at 2787.333 kb on + strand at 2787.334 kb on - strand at 2787.334 kb on - strand at 2787.347 kb on - strand at 2787.444 kb on - strand at 2787.464 kb on - strand, within MPMX20_02643 at 2787.511 kb on - strand, within MPMX20_02643 at 2787.524 kb on + strand, within MPMX20_02643 at 2787.529 kb on + strand, within MPMX20_02643 at 2787.532 kb on - strand, within MPMX20_02643 at 2787.532 kb on - strand, within MPMX20_02643 at 2787.532 kb on - strand, within MPMX20_02643 at 2787.532 kb on - strand, within MPMX20_02643 at 2787.617 kb on + strand, within MPMX20_02643 at 2787.625 kb on - strand, within MPMX20_02643 at 2787.641 kb on - strand, within MPMX20_02643 at 2787.641 kb on - strand, within MPMX20_02643 at 2787.643 kb on + strand, within MPMX20_02643 at 2787.651 kb on - strand, within MPMX20_02643 at 2787.717 kb on - strand at 2787.754 kb on - strand at 2787.801 kb on - strand at 2787.917 kb on + strand at 2788.604 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (C) remove 2,786,445 - MPMX20_02642 0.20 -3.7 2,786,466 + MPMX20_02642 0.22 +1.2 2,786,529 + MPMX20_02642 0.28 -0.7 2,786,556 - MPMX20_02642 0.30 -1.2 2,786,556 - MPMX20_02642 0.30 -2.2 2,786,556 - MPMX20_02642 0.30 +0.3 2,786,556 - MPMX20_02642 0.30 -2.7 2,786,556 - MPMX20_02642 0.30 +0.4 2,786,570 - MPMX20_02642 0.32 -2.2 2,786,670 + MPMX20_02642 0.41 +1.7 2,786,678 - MPMX20_02642 0.42 +1.2 2,786,683 - MPMX20_02642 0.42 -1.2 2,786,720 + MPMX20_02642 0.46 -1.8 2,786,728 - MPMX20_02642 0.46 +0.9 2,786,728 - MPMX20_02642 0.46 +0.2 2,786,821 + MPMX20_02642 0.55 -2.5 2,786,829 - MPMX20_02642 0.56 +0.9 2,786,831 + MPMX20_02642 0.56 -2.2 2,786,834 - MPMX20_02642 0.56 +0.5 2,786,839 - MPMX20_02642 0.57 +0.7 2,786,865 - MPMX20_02642 0.59 +1.5 2,786,949 - MPMX20_02642 0.67 +1.4 2,787,151 + MPMX20_02642 0.86 -1.0 2,787,153 - MPMX20_02642 0.87 -1.5 2,787,185 - MPMX20_02642 0.90 -1.0 2,787,196 - -0.4 2,787,219 - -1.1 2,787,230 + -3.5 2,787,272 + +0.5 2,787,275 + -0.0 2,787,290 - +1.4 2,787,326 + -1.0 2,787,333 + -1.5 2,787,334 - -0.6 2,787,334 - -1.2 2,787,347 - +0.8 2,787,444 - -0.9 2,787,464 - MPMX20_02643 0.16 -0.3 2,787,511 - MPMX20_02643 0.33 -3.5 2,787,524 + MPMX20_02643 0.38 -3.7 2,787,529 + MPMX20_02643 0.40 -0.0 2,787,532 - MPMX20_02643 0.41 -0.0 2,787,532 - MPMX20_02643 0.41 -1.0 2,787,532 - MPMX20_02643 0.41 -0.6 2,787,532 - MPMX20_02643 0.41 -1.2 2,787,617 + MPMX20_02643 0.72 -3.4 2,787,625 - MPMX20_02643 0.75 -3.1 2,787,641 - MPMX20_02643 0.80 +0.2 2,787,641 - MPMX20_02643 0.80 -1.2 2,787,643 + MPMX20_02643 0.81 -2.6 2,787,651 - MPMX20_02643 0.84 -1.0 2,787,717 - -1.5 2,787,754 - -1.6 2,787,801 - +1.0 2,787,917 + +0.5 2,788,604 - +0.4
Or see this region's nucleotide sequence