Experiment: L-Citrulline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01619 and MPMX20_01620 are separated by 11 nucleotides MPMX20_01620 and MPMX20_01621 overlap by 4 nucleotides MPMX20_01621 and MPMX20_01622 are separated by 88 nucleotides
MPMX20_01619: MPMX20_01619 - HTH-type transcriptional activator RhaS, at 1,711,046 to 1,711,837
_01619
MPMX20_01620: MPMX20_01620 - Acylphosphatase, at 1,711,849 to 1,712,130
_01620
MPMX20_01621: MPMX20_01621 - Sulfurtransferase TusE, at 1,712,127 to 1,712,456
_01621
MPMX20_01622: MPMX20_01622 - Modulator of FtsH protease YccA, at 1,712,545 to 1,713,204
_01622
Position (kb)
1712
1713 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 1711.128 kb on - strand, within MPMX20_01619 at 1711.142 kb on - strand, within MPMX20_01619 at 1711.160 kb on + strand, within MPMX20_01619 at 1711.175 kb on - strand, within MPMX20_01619 at 1711.282 kb on - strand, within MPMX20_01619 at 1711.324 kb on + strand, within MPMX20_01619 at 1711.332 kb on - strand, within MPMX20_01619 at 1711.361 kb on + strand, within MPMX20_01619 at 1711.369 kb on - strand, within MPMX20_01619 at 1711.377 kb on + strand, within MPMX20_01619 at 1711.377 kb on + strand, within MPMX20_01619 at 1711.382 kb on + strand, within MPMX20_01619 at 1711.382 kb on + strand, within MPMX20_01619 at 1711.390 kb on - strand, within MPMX20_01619 at 1711.390 kb on - strand, within MPMX20_01619 at 1711.428 kb on - strand, within MPMX20_01619 at 1711.514 kb on - strand, within MPMX20_01619 at 1711.585 kb on + strand, within MPMX20_01619 at 1711.585 kb on + strand, within MPMX20_01619 at 1711.585 kb on + strand, within MPMX20_01619 at 1711.590 kb on + strand, within MPMX20_01619 at 1711.593 kb on - strand, within MPMX20_01619 at 1711.593 kb on - strand, within MPMX20_01619 at 1711.593 kb on - strand, within MPMX20_01619 at 1711.593 kb on - strand, within MPMX20_01619 at 1711.593 kb on - strand, within MPMX20_01619 at 1711.595 kb on + strand, within MPMX20_01619 at 1711.603 kb on - strand, within MPMX20_01619 at 1711.603 kb on - strand, within MPMX20_01619 at 1711.627 kb on - strand, within MPMX20_01619 at 1711.634 kb on + strand, within MPMX20_01619 at 1711.682 kb on + strand, within MPMX20_01619 at 1711.690 kb on + strand, within MPMX20_01619 at 1711.805 kb on + strand at 1711.805 kb on + strand at 1711.805 kb on + strand at 1711.831 kb on + strand at 1711.831 kb on + strand at 1711.831 kb on + strand at 1711.831 kb on + strand at 1711.839 kb on - strand at 1711.883 kb on + strand, within MPMX20_01620 at 1711.895 kb on - strand, within MPMX20_01620 at 1711.896 kb on - strand, within MPMX20_01620 at 1711.905 kb on + strand, within MPMX20_01620 at 1711.920 kb on + strand, within MPMX20_01620 at 1711.928 kb on - strand, within MPMX20_01620 at 1711.966 kb on + strand, within MPMX20_01620 at 1711.966 kb on + strand, within MPMX20_01620 at 1711.991 kb on - strand, within MPMX20_01620 at 1712.031 kb on + strand, within MPMX20_01620 at 1712.071 kb on + strand, within MPMX20_01620 at 1712.557 kb on + strand at 1712.563 kb on + strand at 1712.571 kb on - strand at 1712.607 kb on - strand at 1712.614 kb on + strand, within MPMX20_01622 at 1712.651 kb on + strand, within MPMX20_01622 at 1712.665 kb on - strand, within MPMX20_01622 at 1712.684 kb on - strand, within MPMX20_01622 at 1712.722 kb on + strand, within MPMX20_01622 at 1712.722 kb on + strand, within MPMX20_01622 at 1712.730 kb on - strand, within MPMX20_01622 at 1712.730 kb on - strand, within MPMX20_01622 at 1712.809 kb on + strand, within MPMX20_01622 at 1712.862 kb on + strand, within MPMX20_01622 at 1712.872 kb on + strand, within MPMX20_01622 at 1712.932 kb on + strand, within MPMX20_01622 at 1712.932 kb on + strand, within MPMX20_01622 at 1712.945 kb on - strand, within MPMX20_01622 at 1713.016 kb on - strand, within MPMX20_01622 at 1713.023 kb on + strand, within MPMX20_01622 at 1713.037 kb on - strand, within MPMX20_01622 at 1713.046 kb on + strand, within MPMX20_01622 at 1713.054 kb on - strand, within MPMX20_01622 at 1713.064 kb on - strand, within MPMX20_01622 at 1713.067 kb on + strand, within MPMX20_01622 at 1713.075 kb on - strand, within MPMX20_01622 at 1713.085 kb on - strand, within MPMX20_01622 at 1713.085 kb on - strand, within MPMX20_01622 at 1713.085 kb on - strand, within MPMX20_01622 at 1713.085 kb on - strand, within MPMX20_01622 at 1713.085 kb on - strand, within MPMX20_01622 at 1713.134 kb on + strand, within MPMX20_01622 at 1713.134 kb on + strand, within MPMX20_01622 at 1713.147 kb on + strand at 1713.155 kb on + strand at 1713.160 kb on + strand at 1713.160 kb on + strand at 1713.163 kb on - strand at 1713.168 kb on - strand at 1713.168 kb on - strand at 1713.207 kb on - strand at 1713.223 kb on - strand at 1713.224 kb on + strand at 1713.271 kb on + strand at 1713.292 kb on + strand at 1713.302 kb on - strand at 1713.382 kb on + strand at 1713.389 kb on - strand at 1713.389 kb on - strand at 1713.410 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (C) remove 1,711,128 - MPMX20_01619 0.10 +0.3 1,711,142 - MPMX20_01619 0.12 +1.1 1,711,160 + MPMX20_01619 0.14 -1.5 1,711,175 - MPMX20_01619 0.16 -0.9 1,711,282 - MPMX20_01619 0.30 +0.8 1,711,324 + MPMX20_01619 0.35 -1.3 1,711,332 - MPMX20_01619 0.36 -1.8 1,711,361 + MPMX20_01619 0.40 -1.3 1,711,369 - MPMX20_01619 0.41 +0.9 1,711,377 + MPMX20_01619 0.42 +0.7 1,711,377 + MPMX20_01619 0.42 +0.7 1,711,382 + MPMX20_01619 0.42 +1.3 1,711,382 + MPMX20_01619 0.42 -2.5 1,711,390 - MPMX20_01619 0.43 -3.2 1,711,390 - MPMX20_01619 0.43 -2.3 1,711,428 - MPMX20_01619 0.48 -4.9 1,711,514 - MPMX20_01619 0.59 +1.3 1,711,585 + MPMX20_01619 0.68 -0.3 1,711,585 + MPMX20_01619 0.68 +0.1 1,711,585 + MPMX20_01619 0.68 +1.2 1,711,590 + MPMX20_01619 0.69 +1.8 1,711,593 - MPMX20_01619 0.69 -3.1 1,711,593 - MPMX20_01619 0.69 +0.5 1,711,593 - MPMX20_01619 0.69 -2.8 1,711,593 - MPMX20_01619 0.69 +0.3 1,711,593 - MPMX20_01619 0.69 +1.9 1,711,595 + MPMX20_01619 0.69 -2.4 1,711,603 - MPMX20_01619 0.70 +1.0 1,711,603 - MPMX20_01619 0.70 -1.4 1,711,627 - MPMX20_01619 0.73 +0.2 1,711,634 + MPMX20_01619 0.74 +0.8 1,711,682 + MPMX20_01619 0.80 -0.5 1,711,690 + MPMX20_01619 0.81 -0.2 1,711,805 + +0.9 1,711,805 + +1.3 1,711,805 + -1.3 1,711,831 + +0.5 1,711,831 + +1.8 1,711,831 + +0.6 1,711,831 + +0.8 1,711,839 - -4.1 1,711,883 + MPMX20_01620 0.12 -1.3 1,711,895 - MPMX20_01620 0.16 -1.7 1,711,896 - MPMX20_01620 0.17 -0.3 1,711,905 + MPMX20_01620 0.20 +0.7 1,711,920 + MPMX20_01620 0.25 -2.3 1,711,928 - MPMX20_01620 0.28 -2.9 1,711,966 + MPMX20_01620 0.41 -0.3 1,711,966 + MPMX20_01620 0.41 +1.2 1,711,991 - MPMX20_01620 0.50 -2.1 1,712,031 + MPMX20_01620 0.65 -2.6 1,712,071 + MPMX20_01620 0.79 -2.7 1,712,557 + +2.8 1,712,563 + +0.3 1,712,571 - +0.2 1,712,607 - +0.7 1,712,614 + MPMX20_01622 0.10 +1.2 1,712,651 + MPMX20_01622 0.16 +0.7 1,712,665 - MPMX20_01622 0.18 +0.5 1,712,684 - MPMX20_01622 0.21 -2.8 1,712,722 + MPMX20_01622 0.27 +0.9 1,712,722 + MPMX20_01622 0.27 -3.3 1,712,730 - MPMX20_01622 0.28 -0.5 1,712,730 - MPMX20_01622 0.28 +0.8 1,712,809 + MPMX20_01622 0.40 -0.9 1,712,862 + MPMX20_01622 0.48 -0.1 1,712,872 + MPMX20_01622 0.50 +0.4 1,712,932 + MPMX20_01622 0.59 -1.9 1,712,932 + MPMX20_01622 0.59 +1.5 1,712,945 - MPMX20_01622 0.61 -0.2 1,713,016 - MPMX20_01622 0.71 -2.0 1,713,023 + MPMX20_01622 0.72 +0.7 1,713,037 - MPMX20_01622 0.75 -3.4 1,713,046 + MPMX20_01622 0.76 -0.7 1,713,054 - MPMX20_01622 0.77 +1.6 1,713,064 - MPMX20_01622 0.79 -0.0 1,713,067 + MPMX20_01622 0.79 +0.3 1,713,075 - MPMX20_01622 0.80 +0.3 1,713,085 - MPMX20_01622 0.82 -0.5 1,713,085 - MPMX20_01622 0.82 -2.6 1,713,085 - MPMX20_01622 0.82 +0.6 1,713,085 - MPMX20_01622 0.82 -1.6 1,713,085 - MPMX20_01622 0.82 +2.1 1,713,134 + MPMX20_01622 0.89 -1.0 1,713,134 + MPMX20_01622 0.89 -2.8 1,713,147 + +0.1 1,713,155 + -1.7 1,713,160 + -0.6 1,713,160 + -3.6 1,713,163 - -3.2 1,713,168 - +1.8 1,713,168 - +1.3 1,713,207 - -1.3 1,713,223 - +0.9 1,713,224 + +1.3 1,713,271 + -0.1 1,713,292 + -3.1 1,713,302 - +0.6 1,713,382 + -0.6 1,713,389 - +3.7 1,713,389 - -2.6 1,713,410 + -0.0
Or see this region's nucleotide sequence